ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100551 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◣ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

SREBF1
NFE2
LPCAT3
PPCDC
ZGPAT
ARFRP1
KIF5C
PDE6B
RBKS
BABAM2
MTRNR2L2
MSH3
DHFR
MEIG1
DCLRE1C
SNCG
MMRN2
RARB
MYLIP
REC8
CNOT3
ACACA
MTRNR2L8
METTL11B
GPC6
STRA8
ZBTB7C
MTRNR2L1
ATF4
MIEF1
RARA
PMF1-BGLAP
PMF1
MUC3A
NUDT15
METTL24
ENOSF1
CYP26A1
NGB
DUX4
BCKDK
KCNN4
TARBP1
GABRB2
ADM
ZNF436
GGA1
ASXL1
UBFD1
EARS2
DENND4B
STARD13
PRSS47
ARHGEF38
MYF6
MYF5
SFXN3
PDZD7
PDE12
CLDN2
PTPRN2
PLXNA4
CPLX1
SPATA25
NEURL2
CTSA
ZSWIM1
DHRS3
SCML1
H4C12
H4C11
H2BC14
H2AC14
CSAD
ZNF740
PNISR
KAT6B
ABCA1
BRI3
BCAP31
ABCD1
CTDSP1
MS4A4A
DOT1L
SH2B1
MAPK1IP1L
SLC25A20
OTP
BRSK2
SLC10A2
HOXB1
H2BC15
H2AC15
GSN
VBP1
RGPD2
RGPD1
MIDEAS
CCDC71
KDM6B
SOX1
SOCS3
MAMDC2
NDUFS7
RPS3A
LAMP1
PANK2
ACSL3
OTUD7B
TNFSF8
TCF7
MTRNR2L10
MDM2
CDCA7L
TCP11
LOC102724770
DGCR6
POU2F3
PLAAT4
RTF1
GALNT9
CNOT2
YTHDF2
CLDN9
CLDN6
SMARCD2
WASHC2A
ZNF610
EPHX3
GIMAP5
LMNB2
CHRNA1
H2BU1
H2AW
DHX32
KMT5A
NINL
TMEM216
SRCAP
LOC730183
WASHC2C
H4C9
H2BC12
H2BC11
H2AC12
H2AC11
UHRF1
ARRDC5
ASB12
CPT1A
ERCC1
WDFY2
NUF2
TEDC1
CRIP1
CRIP2
RPGRIP1
ZNF664-RFLNA
ZNF664
CCDC92
FXR1
ITFG2
CADM3
H4C15
H4C14
H3C15
H3C14
SPACA6
ZFP37
HDHD5
FAM207A
TCF7L2
LTBP3
MNT
DYNLL1
EPB41L1
TCEA3
NCOA7
ZBTB40
PGS1
TET2
SPDYE16
RIPOR3
MRPS31
ODF3L2
MADCAM1
POLR2J3
CEP70
SGCA
GNAI1
PAFAH2
STX18
SKIL
PMPCB
LGALS1
NOL12
TBC1D23
CARD14
DDC
TRMT1
NACC1
MTRNR2L9
TRMT2A
RANBP1
MAGEB1
C1orf198
VSX1
PHKB
ITFG1
CPB1
STAT3
P2RY11
EIF3G
PPAN-P2RY11
PPAN
MTRF1L
RDH5
ITGA7
BLOC1S1
RUNX1T1
AGO1
HEXA
CTSW
EFEMP2
PLEKHG3
WIZ
LFNG
CHCHD10
MTRNR2L6
C22orf15
VPS33A
ZNF827
DTX2
PPP1R12C
SYTL1
ZNF746
DNAJB5
NEFH
FASN
RB1CC1
LAMA5
KANSL3
FER1L5
RHOB
IGDCC4
ANKRD28
TCAF1
CST6
EIF1AD
BANF1
SLC4A8
TSPAN15
BCL11B
EXT1
KCNJ4
ART1
OBI1
SEMA6D
WFDC2
SLC5A10
SF3A3
INTS12
GSTCD
MTF2
ZNF385A
RPS8
PFKL
CROCC
LRRC20
METRN
ANTKMT
EFCAB14
SOCS2
SPRED2
CEP41
RIN2
COMMD4
CFAP20DC
PIKFYVE
MARCHF8
WBP1L
NIBAN2
C6orf132
CCDC60
SYBU
ZSCAN1
FRG1
ALG1L
MLLT3
SCG3
REXO4
ADAMTS13
KEAP1
BATF
S1PR5
CHMP7
DAO
CLSTN2
MAPKAPK2
FNDC5
EPN1
CLK3
RAP1GAP
KRT83
MIGA1
SLC7A8
KCNB1
FAT2
EAPP
H3C4
H4C4
H2BC6
FLYWCH2
LRIG1
SMYD2
B4GALNT3
SIGIRR
USP37
CNOT9
METAP1
BUB1
KCNA4
EGR2
ADGRG1
INO80C
CAB39L
FASTKD1
DUSP15
MTFR1L
MYBL1
GPATCH8
OLFML2A
NR6A1
ABCC4
GBX1
PLCD3
ACBD4
SLC39A3
NODAL
CXXC4
NR2C1
TAOK3
SUDS3
ARHGEF12
CDK12
MED1
IL17B
LETM1
HPCA
PTEN
KLLN
TOP3B
MBD2
TTC24
NAXE
ANK1
PUS10
PEX13
ATP5MC2
FXN
RND3
NR2C2AP
NCAN
GABRG2
ANGPTL4
KDM3B
SPDYE7P
POM121
CCDC120
HOXA5
HOXA3
LRRC37A3
GRAPL
NFIC
MDK
HOXA6
IRF9
ZAP70
GRPEL1
CCNDBP1
IFI16
PYDC5
HUS1
NPPB
SIPA1
CEP131
TTYH2
MED9
SLC34A3
RNF224
PDE8A
TUBB4B
RPH3A
KCNAB2
POLDIP3
LRMDA
SKIV2L
NELFE
TMEM170A
RHOBTB1
TNS1
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
NOXO1
RPS2
RNF151
TBL3
ETFA
KLF9
RNF145
B4GALT1
GOLGA6D
MTHFD1
FBN2
NAALAD2
PRR5L
AP2S1
COMMD9
SCGB1C2
GRAP
ZSCAN9
TTC13
FRA10AC1
TM9SF1
IPO4
KCTD5
NCBP3
TRIM16L
SMIM22
ROGDI
CYREN
SLC7A5
TOX4
RAB2B
SNX8
FAM177B
CATSPER4
PRXL2A
TRMO
TPH2
ATP6V0A4
TCOF1
KCNH1
ADGRA2
YIF1A
TMEM151A
TEFM
CHCHD5
COL23A1
SNRPB
NDUFV1
SF3B2
GAL3ST3
CORO6
RBM20
ACVR1C
AFG3L2
TSPAN4
POLR2L
PLEKHM3
FAM86B2
CYS1
FAM90A1
H4C8
RCOR3
TNFAIP8L2
SCNM1
LYSMD1
UPK3BL2
NMU
FAM71A
DKK1
ADAM17
LNPEP
TBC1D22A
S1PR1
ASAP2
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
AIFM2
BAIAP2
MED23
ENPP3
EIF2D
TJP3
GNG3
BSCL2
ABCB5
MRPL34
DDA1
ABHD8
SDC3
KRTDAP
XCR1
GUK1
GJC2
MTA3
TSPYL2
DMKN
SLC4A9
FAM24A
FBXO46
NR1H3
ACP2
DCP1A
ARID2
GRIFIN
CHKA
HSD3B7
BNIP1
RRP9
PARP3
NFATC2IP
NAGPA
CADPS
MDGA1
AMOTL2
TLN1
CREB3
TMA7
PLXNB1
CCDC51
DDX18
AHSP
PRSS50
DLG4
ACADVL
INTS5
GANAB
SYT8
ARHGEF16
TSNAXIP1
SLC25A47
DSTYK
AHCY
VPS26C
WDR36
TOP2B
ST18
TREX1
SHISA5
PSMD11
AGO2
USP3
COX16
ZNF593
CNKSR1
C1orf232
SPDYE5
POM121C
COPG1
ELOVL6
SLC12A9
PCOLCE
MOSPD3
ZNF554
DNAJC16
CASP9
LRP3
SQSTM1
LMNA
MEX3A
ZNF3
COPS6
MAP3K13
PRKCD
PPP6R3
INHBE
GLI1
DOK7
DNAH7
SCNN1A
LTBR
NBPF1
SSBP2
CLUL1
SPN
BOLA3
NDUFS3
KBTBD4
FAM180B
TENT5B
RHOC
NCF4
FAM83D
MECOM
SEPTIN5
RASSF8
IER3
FLOT1
NAA40
MAD2L2
ABCG1
DRAXIN
AXL
CMTM3
ANKAR
SPHK2
DBP
GOT1
CLTB
CEP128
RELL2
HDAC3
ETFDH
C4orf46
SCARB1
CCDC174
GNAI2
SLC2A9
WDR11
FBP1
CTTNBP2NL
BSND
SLC25A51
LCA5
MRPL16
LINGO1
TIA1
PCYOX1
ZNF354A
LSS
IRF2BPL
DUSP9
CAMK1G
THAP11
LARP1
PHB2
MTFR1
THAP1
LDLRAD2
NUTF2
CENPT
GOLGA6L10
MRPL44
STARD4
GTPBP6
B3GLCT
STX4
DHX8
RARG
CD79A
ARHGEF1
PIP4K2C
STK39
ASB6
GTF2IRD1
AIF1L
EIF1B
ATR
TXNDC15
OR5AR1
CRYBG1
SMARCD1
ARMC12
CETP
FKBP5
TRIM2
SPTB
SPAAR
HRCT1
ETV4
NPAS4
TBCEL-TECTA
TBCEL
PCTP
CXCR5
IDH2
PHRF1
CHN2
CPVL
IDH1
SRA1
SLC35A4
APBB3
GMNC
PTPRH
MAPK13
FCGRT
HILPDA
BAG3
DUSP11
C2orf78
NBPF20
WDR7
TMEM222
TEF
MEF2B
PCDH17
DCTD
SLC24A1
INTS14
RPS20
CDX1
SNRPA
C19orf54
RNF141
UBTF
TIMMDC1
ONECUT1
URM1
SPAG8
HINT2
SYTL3
DYNLT1
CCDC59
GPR160
PHACTR1
GAREM2
HINT3
MTIF2
NCAM1
PPP1R3E
TCP11L1
MARCHF7
DPH7
ZNF532
HOMEZ
CLEC4G
ANKRD35
RBAK-RBAKDN
RBAK
BAX
FTL
JUP
TSPAN14
LPIN3
KCNQ4
MACF1
TRAPPC3
MAP7D1
EDAR
YIF1B
KCNK6
LIPE
SPNS1
LAT
ZCCHC4
DNASE1L3
LPCAT1
DUSP4
FOXE3
CDKN2AIPNL
COIL
TNC
SH3BP2
TP53INP2
SHFL
ARHGAP33
EEF2KMT
NANOS3
RGS19
TCEA2
B4GALT3
PTGES2
NBPF12
TPM1
PEX3
ADAT2
POFUT2
CCDC144A
FBP2
POU5F1
MBD1
CXXC1
APOBEC1
RPSA
RASA4
CA11
LOXHD1
SMG7
TBPL1
MKNK2
DLG2
OSER1
NEXN
UNC45B
NLE1
ATP1B2
AGRN
NAPA
GGACT
ZNF792
CCDC83
PPP6R1
CORO7-PAM16
CORO7
ADAMTSL4
GORASP2
PACC1
MINDY2
WSB2
ITGB5
VSIR
BCAR1
ARID3B
ZNF367
TNPO3
TAGLN2
TOX2
S100A9
PGLYRP4
RXRA
TINAGL1
SOAT2
IGFBP6
ATXN1
ACTN4
MEAK7
TRIOBP
VGLL4
ZMYND8
KRT7
ASB2
POLR2E
GPX4
TES
MB
RBM24
SMIM29
COTL1
CIITA
PEMT
S100A2
PEAR1
ANP32C
HMGA1
RHOF
TSKS
AP2A1
UQCRHL
MRPS10
ECH1
FOSL1
CDK11A
EFHD2
TRIM25
TRIM55
SIRT5
SLC35F6
NUBP1
USP32
TGM2
H3C3
H1-2
ID1
KLF10
TNFRSF1A
BHLHE40
TRIL
PHC2
MYEOV
CRY1
NFKBIA
EXOC3L4
BCL3
GABRE
FHL2
PPP1R15B
LIMS1
RRN3
PECAM1
SLC20A1
TBP
PSMB1
ITGA3
NOL4L
CCL20
ANXA1
PLAU
UROS
BCCIP
AJUBA
MGST3
NOL7
C2CD2
CRTC1
PCNA
GBA
SH3BP4
SEPTIN9
SPEGNB
GMPPA
UPP1
TACSTD2
ANGPTL7
PLEC
ADNP
RNF10
COQ5
MLYCD
INSYN2B
LY6K
RGS3
SCRN2
MRPL10
LRRC46
ABCC3
FAM184A
BCL9
CAT
MYBL2
PRKAG2
CITED4
SDCBP2
MUC5AC
DRAP1
C11orf68
ROCK2
PLIN4
ECI2
KRT8
RALGDS
KCNMA1
JRK
ITGB2
RARRES1
PLIN2
ASB1
CLCF1
CSRP1
CCDC200
LOC389199
AFAP1
GIP
LOC102724265
GPC1
LTBP2
VPS72
PIP5K1A
ETFB
BCL2L1
TUFT1
ANAPC15
SLC45A4
C16orf95
FRG2
SERPINE1
GKN1
HMGCS2
STT3B
SLC16A5
CDV3
RPL22
RNF207
ABCC10
TFAP2A
PLD1
ACAA2
NEDD4L
LEKR1
ITPK1
SLC50A1
EFNA1
HSD17B4
UPF2
H2AC19
H2AC18
MAP2K3
ACSL5
TBC1D2
SH2B3
ZNF366
TM4SF18
PFKP
PSCA
LEO1
DBI
C2orf76
RIN3
PTPN4
KRT31
SULT1C2
NKG7
CLDND2
UBE2T
PPP1R12B
NFIB
RRAD
RAPGEF1
CIAO2B
CES2
SBNO2
PMEPA1
GRAMD1C
DAW1
SMAD3
PLEKHM2
ABHD6
COL16A1
SETD1B
ATXN2
NFE2L3
GEMIN6
CDH16