ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

KIF5C
MTRNR2L9
MTRNR2L1
RGPD2
RGPD1
MTRNR2L10
EMILIN2
METTL15
KIF18A
PTPRN2
IDH3B
MTRNR2L2
MSH3
DHFR
CCDC59
NAGPA
MTRNR2L8
RBM19
SUMF1
NGDN
TRMT1
NACC1
ATG14
MRM3
GLOD4
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
ISY1-RAB43
ISY1
GATB
CDC23
MTRNR2L6
VPS50
HEPACAM2
MRPS18C
HELQ
GPATCH3
MRPL39
TSR3
GNPTG
PPWD1
CENPK
MAMDC2
ZFYVE26
RAD51B
UBE3B
PDE6D
COPS7B
SMG8
RBM48
PEX1
ZNF165
OR1F12
GTF3C5
EIF2D
SPNS1
LAT
MRPL1
SFSWAP
C8orf33
RTTN
RGS14
LMAN2
PRR5L
COMMD9
KRR1
WASHC2A
RANBP6
KIAA2026
GET3
ZC3HC1
THRA
MED24
NDUFAF2
ERCC8
COL23A1
ERAL1
PHF5A
ACO2
MED6
SSNA1
ANAPC2
TMEM41A
TMEM199
SEBOX
POLDIP2
WDR18
POLR3F
DZANK1
MRPL44
PLEKHN1
NOC2L
KLHL17
SREK1IP1
CWC27
TRAPPC2L
GALNS
NCAPH2
LMF2
BRIX1
PSMB7
SUPT7L
SLC4A1AP
INTU
TCTN2
CNOT3
PUS10
PEX13
TRIP4
PCLAF
TOMM22
NDUFS3
KBTBD4
FAM180B
TFPT
PRPF31
XAB2
STXBP2
PCP2
DNTTIP2
EIF3H
PPT1
BSDC1
C16orf89
ALG1
UNKL
C16orf91
TIMM22
POLR1F
VIRMA
NDUFS7
TOMM6
PRICKLE4
FRS3
MRPS15
ZNRD2
FAM89B
EHBP1L1
MTIF2
RNF26
C1QTNF5
PEPD
FEM1A
SAP30BP
RECQL5
CWF19L1
CSPP1
COPS5
URM1
PDCD6IP
UBL5
FBXL12
LARS2
DUX4
RBM42
MRPS14
FAM162A
CCDC58
LOC102724770
DGCR6
NUP214
USHBP1
BABAM1
UQCC1
MRPL45
EIF1AD
CST6
BANF1
RRP15
NOL8
CENPP
MRPL55
RPTOR
TMEM208
LRRC29
SETD3
CCNK
FASTKD2
PEX19
EIF3F
TMEM101
CRBN
TEKT2
ADPRS
TAF3
BBS1
TSR1
SGSM2
ZMAT2
HARS2
HARS1
HBS1L
DBT
LIN52
ALDH6A1
TMEM126B
DLG2
TPRN
TMEM203
NDOR1
PFDN1
MTBP
MRPL13
NPM3
FGF8
PMPCA
ENTR1
UBIAD1
NSFL1C
WASHC2C
NUP160
HEXA
DNAJC30
BUD23
NMNAT1
LZIC
TIMM17A
LMOD1
TRIAP1
COX6A1
MKS1
BRF2
VPS11
TXN2
NAXE
GPATCH4
SF3B2
GAL3ST3
MRPS11
MRPL46
SLC39A4
CPSF1
SF3B3
COG4
RCE1
MYL5
ATP5ME
RTN4IP1
QRSL1
DDX23
MRPS22
YIPF2
TIMM29
TRMO
SPRYD4
SENP1
PFKM
MRPL21
IGHMBP2
COX10
HNRNPA1L2
NOL11
IPO11
DIMT1
MOCS3
DPM1
CEP20
COX16
PSMC3
C5orf51
NMT1
DCAKD
MRTO4
EMC1
ZNF789
ATP5MF-PTCD1
ATP5MF
ZNF213
METTL16
COMMD4
MRPL2
KLC4
CUL7
QRICH1
MRPS31
TAS1R1
NOL9
DBNDD2
PISD
C12orf43
KAT8
BCKDK
PIGL
NCOR1
UTP20
TRMT61B
KCTD5
NUP54
TACO1
ZNF207
C17orf75
TMEM262
SPATA25
NEURL2
CTSA
WDR74
STX5
RBX1
LONP1
CATSPERD
SUGCT
MPLKIP
ATP5IF1
PELP1
ARRB2
MFN2
TOP3A
SMCR8
ZFAND2A
RABL3
GTF2E1
TEFM
VPS33A
ZSCAN22
NCAPD2
MRPL51
PACSIN3
ARFGAP2
RDH5
ITGA7
BLOC1S1
ZNF17
OSCAR
NDUFA3
RPUSD4
FAM118B
NDUFAF1
UHMK1
OXNAD1
DPH3
MRPL58
VCPKMT
HSPBP1
BRSK1
THUMPD1
SLC25A53
FAM199X
ZBTB45
SLC27A5
OS9
ATP7B
ALG11
KCNJ14
GRWD1
OPA1
OAZ3
MRPL9
XPO4
CDK5RAP1
TAF2
OR2T1
DNAJC11
TATDN3
NSL1
MZT2A
TAF10
TPP1
STX18
ERICH4
DMAC2
MRPL48
WNK4
VPS25
LIN7C
PPP1R11
POLR1H
SPATA20
CACNA1G
MNAT1
TNPO3
VAC14
ABT1
LAMP1
ANKRD13C
PPP1R7
PASK
WDR24
STUB1
JMJD8
KDM4D
CWC15
DNAJB12
RNF6
ERGIC2
TJAP1
ZZZ3
RNASEK
C17orf49
TMX2
MED19
WDR48
SCN11A
USP54
MUC3A
EIF3E
ALKBH3
COPS8
MPHOSPH10
MCEE
TSN
AURKAIP1
TIMM21
FBXO15
SLC7A6OS
PRMT7
SPAG1
POLR2K
FBXO43
SYF2
MED23
ENPP3
SLC35A3
HMGCL
DUS2
DPEP2NB
DDX28
DIABLO
TM9SF4
MRPS10
USP30
NOC4L
DDX51
NGB
ZDHHC6
VTI1A
TRMT44
ACOX3
STX16
CSTF2
TBRG4
ZMPSTE24
TMCO2
SEC16A
C9orf163
ZNF770
SUPV3L1
PHB2
WDR53
FBXO45
ZNF514
ZNF2
XPC
LSM3
FZR1
DOHH
RPS28
NDUFA7
TAF11
ANKS1A
ARMC8
KLF1
GCDH
DNASE2
PHRF1
HAX1
DDX46
ZKSCAN4
NKAPL
NDUFB5
MRPL47
WDR83OS
WDR83
MAN2B1
ZGLP1
FDX2
USP8
SLC35B1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SLC25A26
SYNGAP1
CUTA
ZC3H18
SMPD4
MZT2B
NDUFV1
FAM187A
EFTUD2
CCDC103
WDR36
OR6B2
NDUFA10
SART3
ISCU
EXOSC3
RFXANK
BORCS8
MTO1
CGAS
SNRPC
EEF1E1
KLHDC4
SRPRA
APTX
LSM5
AVL9
CCDC43
TUFM
SH2B1
CCAR2
C8orf58
ZCCHC4
FANCD2
YBEY
MCM3AP
CDKAL1
NUF2
RPUSD2
CCDC32
LRRC8A
KYAT1
TRUB1
PTPN21
STOML2
PIGO
FAM214B
METTL2A
TAX1BP3
EMC6
PUM3
WDR70
NUP155
RAE1
MTRNR2L3
GTF3C3
C2orf66
GOLGA3
RANBP3
NDUFA9
AKAP3
PIN1
UQCRC1
MAP3K7
SEPTIN4
MTMR4
MRPS17
C1orf198
TBC1D22A
ZNF358
MCOLN1
ZBTB8OS
RBBP4
ZNF205
TYW1B
GTF2H3
EIF2B1
ZSCAN30
PNKP
AKT1S1
RPS7
TBC1D17
PEX3
ADAT2
ZDHHC16
EXOSC1
DPP9
ZKSCAN8
CCDC97
UBXN11
TDG
C12orf73
AGBL4
PIGK
NDUFAB1
UBN1
GLYR1
AP3S2
NFKBIL1
DDX39B
ATP6V1G2
FRG2
SLIRP
ALKBH1
EMC4
SF3A3
ARFGEF2
ZNF461
PHAX
ALDH7A1
MED4
MRPL35
IMMT
SELENOH
ACIN1
COMMD2
WDR11
GBA
TSR2
SDHC
MPZ
TERF2IP
KARS1
AP5Z1
NOP16
HIGD2A
PWP1
MED27
NCSTN
COPA
MAPKAPK5
L3MBTL2
ART1
FAM32A
UBE2A
CXorf56
ZNF408
ARHGAP1
ZNF585B
ZNF383
MED9
NSUN4
ZBTB11
RPL24
IQCH
AAGAB
MRPS7
MIF4GD
GGA3
TRDMT1
AP1G1
SH3YL1
ACP1
PTCD2
MRPS27
AP3S1
STMN3
RTEL1
PROX2
NXT2
MTOR
CWC25
RPLP0
GCN1
TMEM126A
THBS3
MTX1
TMEM230
PCNA
POLR2J2
SMG7
GOSR1
UMPS
ASH2L
TOP3B
MRPL53
MOGS
ZNF561
SSBP1
HIRIP3
PCID2
CUL4A
SPTLC1
GABARAP
ELP5
CTDNEP1
YIPF3
POLR1C
LRRC73
TTC31
CCDC142
GPATCH1
UQCRB
ATAD3B
MRPL20
CCNL2
SPC25
PTCD3
POLR1A
NUP107
MRPL4
PSMB2
TEPSIN
NDUFAF8
MED18
TMEM128
SEC13
PRPF38A
ORC1
WDR4
MED25
FUZ
METTL1
EEF1AKMT3
CYP27B1
SDE2
DCP1A
NSA2
GFM2
DUS4L-BCAP29
DUS4L
COG5
YY1
REXO4
ADAMTS13
FAM149B1
ECD
VPS52
RPS18
B3GALT4
MRPL3
ITGB3BP
EFCAB7
SMU1
MRPS18A
OSBPL9
IMMP1L
ELP4
ANAPC5
TP53I3
SF3B6
FAM228B
VARS2
GTF2H4
TBC1D23
SPSB3
NME3
MRPS34
EME2
SLC33A1
ALG10
TBC1D19
CEP162
TMEM217
TBC1D22B
MFSD5
SCAF11
GPN2
LYRM4
FARS2
ATP6V1C1
TMEM183A
ZNF79
MAGOHB
SEC11A
FAM104B
PSME3
BECN1
GRPEL2
ITGB1BP1
CPSF3
POMZP3
SNRPD3
GUCD1
WASHC5
NSMCE2
DHX40
CSTF2T
EEF1AKMT2
ABRAXAS2
TIMM44
MRPS35
MIA3
FRA10AC1
PEX14
DFFA
WWP2
NOB1
ANAPC1
EXOSC9
ANKFY1
GTPBP10
ZNF195
PSMC4
GPN1
CCDC121
ATXN7L1
DNAJA3
CORO7-PAM16
CORO7
SRRD
HPS4
PCNP
ZNHIT2
FAU
RNF166
CTU2
MRPS23
NUFIP1
GPALPP1
SF3B5
TSSK4
RUVBL1
EEFSEC
FAF2
MDP1
CHMP4A
ZNF497
A1BG
PHF23
DVL2
ANAPC11
ALYREF
TM2D1
SPDL1
CMTR1
AQR
ZCCHC10
NDUFA5
NOL10
VAMP3
METTL14
NR1H3
ACP2
CLDN7
PDXK
ZNF721
SSU72
PIGG
PNPT1
MFSD1
INTS9
HMBOX1
NELFA
TTC26
RPAIN
NUP88
FCF1
AREL1
MAGOH
DDX19A
SAP18
RAB3GAP1
SDHAF2
CPSF7
NOLC1
TBCC
BICRAL
RAD54L2
MYSM1
MTRF1
IPPK
CHM
GPRASP2
BHLHB9
ARMCX5-GPRASP2
SPAAR
HRCT1
DRD4
CACTIN
UBE2L3
NDUFB8
HIF1AN
ZNF581
ZNF580
CCDC106
PRR3
GNL1
EIF4B
NOL12
DHDDS
WBP1
INO80B
ZNF614
NDUFC2-KCTD14
NDUFC2
ATP6V1G1
VPS41
SDR39U1
RPL9
LIAS
MYNN
ACTRT3
ZWINT
PPIL1
C6orf89
DNAJC25-GNG10
DNAJC25
OTUD6B
ZNF501
GSTT2B
GSTT2
DDTL
DDT
OTUB1
MRPL37
CYB5RL
PPIL3
NIF3L1
GID4
ATPAF2
NUDT5
CDC123
RBBP5
ZNF839
NDUFAF5
ESF1
DNAJC13
OSGEPL1
MOK
MED28
FKBPL
ATF6B
STK36
RNF25
METTL2B
NME1-NME2
NME1
PRRT2
MAZ
OSGIN1
TBL3
RPS2
RNF151
NOXO1
THAP10
LRRC49
NDUFS4
KLHL7
VPS35L
TMED9
B4GALT7
RBM28
TOR1AIP2
TOR1AIP1
TMEM237
NFX1
EIF4G2
RBM23
TFIP11
RMDN3
GCHFR
MRPS18B
ATAT1
PRKRIP1
ZNF292
ILF3
BORCS7
NDUFB3
FAM126B
DDX49
COPE
ZNF594
LCMT1
THOC1
RSL24D1
JRK
DOLPP1
YJU2
CLPTM1
APOC2
ARMC1
RPP30
TM7SF3
MED21
RNASEH1
GPAM
TFB2M
CNST
NOXA1
TMA16
MITD1
UBE2L6
TBC1D30
GNS
TSFM
TBC1D15
UTP15
ANKRA2
SEC24C
PAF1
FAM227B
DTWD1
SDHB
CCDC57
GSC2
TBCK
AIMP1
COQ3
NKAP
THBS4
MTX3
TMA7
CCDC51
ATRIP
ZNF426
DDX47
FAM207A
GRN
COPS4
MAN2C1
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
POLR3B
AASDH
LEMD3
ZSCAN9
SPC24
GOSR2
BMS1
UBN2
ALG10B
TIMM50