ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1721565 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX1721564: T-47D

◣ SRX1721565: T-47D

◢ KDM5A: STRING

ERAL1
SUMF1
EIF2D
NAGPA
PSMB7
CRBN
NUP107
SFSWAP
TOMM22
C8orf33
IDH3B
ALKBH3
OAZ3
MRPL9
URM1
KAT8
BCKDK
NEK2
RRP15
TSR3
GNPTG
TMEM262
ZFPL1
CDCA5
VIRMA
UBE3B
TPRN
TMEM203
NDOR1
MTMR2
ATG14
HDAC6
SMG8
TACO1
SUPT7L
SLC4A1AP
ZNF830
CCT6B
SAP30BP
RECQL5
RAG2
IFTAP
NCAPH2
LMF2
CWF19L1
RPTOR
TMEM199
SEBOX
POLDIP2
CCDC59
SSNA1
ANAPC2
MIS18A
MED6
PDE6D
COPS7B
PHAX
ALDH7A1
SPNS1
LAT
VPS50
HEPACAM2
ISY1-RAB43
ISY1
GATB
TAS1R1
NOL9
DDX23
HAX1
KRR1
WDR70
NUP155
MRPS7
MIF4GD
GGA3
MTBP
MRPL13
MTRNR2L2
MSH3
DHFR
NDUFS3
KBTBD4
FAM180B
NGDN
SLC39A4
CPSF1
U2SURP
UBQLN1
CDK5RAP1
TMEM208
LRRC29
ABT1
MRPL48
REXO4
ADAMTS13
RBM48
PEX1
NDUFAB1
ZNF165
OR1F12
FRG2C
PACSIN3
ARFGAP2
PIGU
EIF3H
AAAS
OPA1
ZNRD2
FAM89B
EHBP1L1
WDR18
CENPBD1
PIH1D2
NKAPD1
TRIAP1
COX6A1
SCRN2
OSBPL7
MRPL10
LRRC46
ZNF408
ARHGAP1
BRF2
MRPS35
SERP1
EIF2A
ITFG2
VARS2
GTF2H4
TRMT1
NACC1
TSR1
SGSM2
ZC3H18
VAC14
JRK
TMEM41A
MAPKAPK5
WDR74
STX5
STMN3
RTEL1
TCERG1
MTRNR2L8
REXO1
DNAJC11
POLR3F
DZANK1
DBNDD2
SENP1
PFKM
ZC3HC1
NCAPH
ITPRIPL1
DNAJB12
TIMM21
FBXO15
ZMAT2
HARS2
HARS1
FAM162A
CCDC58
PPWD1
CENPK
IPO11
DIMT1
MRPS15
EIF1AD
CST6
BANF1
MOCS3
DPM1
FNTB
DUS2
DPEP2NB
DDX28
GTF3C5
SLC35B1
SPTLC1
TBC1D14
MRPL45
METTL15
KIF18A
EIF4H
SF3B3
COG4
PSME3
BECN1
GSC2
FANCD2
METTL1
EEF1AKMT3
CYP27B1
TROAP
ATG9B
ABCB8
BORCS7
DARS2
CENPL
CDKAL1
COPZ1
QRICH1
RBX1
MRPS22
SMG7
NDUFAF2
ERCC8
SLIRP
ALKBH1
BBS1
DUX4
NOC4L
DDX51
NUP160
GET3
DIABLO
C12orf43
PSMC3
LAMP1
SART3
ISCU
RFC4
GOLGA3
LONP1
CATSPERD
CRLF3
ATAD5
TMEM242
XPO4
RTTN
NUP214
WDR53
FBXO45
HDAC4
MYBL2
NMNAT1
LZIC
TMEM128
SLC25A53
FAM199X
THRA
MED24
DDX46
GFM1
RGS14
LMAN2
DNAJA3
CORO7-PAM16
CORO7
LANCL2
TIGD5
EEF1D
ENDOV
TM9SF4
TBL3
RPS2
RNF151
NOXO1
PMPCA
ENTR1
TSR2
RAD54B
MRPL39
FRG2
DOLPP1
NUDCD3
ZNF585B
ZNF383
NUDT5
CDC123
NOP53
ATF6
NUF2
API5
LTO1
GOSR1
COIL
MALSU1
FEM1A
STX18
TOP3A
SMCR8
TBRG4
METTL2A
MAGOH
MED1
ACSF3
COX16
UNKL
C16orf91
SMPD4
MZT2B
TXNL4B
DHX38
SLC7A6OS
PRMT7
EEF1E1
SNX19
TXN2
TPGS1
TMEM258
FEN1
USHBP1
BABAM1
UHMK1
SPG7
TEFM
STX16
NAA25
NMT1
DCAKD
HAGH
FAHD1
TFPT
PRPF31
RAE1
MTRNR2L3
NDUFB5
MRPL47
AARSD1
ZBTB6
RC3H2
MRPS11
MRPL46
PGS1
CDC23
ZNF213
SUPT6H
SDF2
XAB2
STXBP2
PCP2
SUGCT
MPLKIP
CSPP1
COPS5
ZNF581
ZNF580
CCDC106
RBM19
GABARAP
ELP5
CTDNEP1
PEF1
SNRPC
UQCC3
UBXN1
LBHD1
COP1
RPLP0
GCN1
USP30
GHITM
MRPL27
EME1
NRDE2
PFDN1
SYF2
RAD18
CHEK1
ERICH4
DMAC2
DPP8
GPATCH3
GPN2
NSFL1C
TIMM23
SNRPE
CDK11B
TARBP2
NPFF
MAP3K12
SF3B2
GAL3ST3
SETD3
CCNK
VPS11
CLPTM1
APOC2
UQCC1
PRR3
GNL1
TGFBRAP1
C2orf49
TRIP13
BRD9
MRPL55
VRK1
ZFYVE26
RAD51B
TSFM
GOSR2
SURF2
SURF1
RPL7A
MED22
CWC25
UTP20
COQ7
TRAIP
TBC1D23
PELP1
ARRB2
PARG
MRPL58
MRM3
GLOD4
TMED9
B4GALT7
FCF1
AREL1
KCNJ14
GRWD1
DBF4B
TRMT61B
GINS1
MRPL21
IGHMBP2
MKS1
ECSIT
CNN1
TYW3
CRYZ
NPM3
FGF8
AP1G1
EXOSC3
FAM149B1
ECD
SART1
FAM98B
NDUFV1
CLPTM1L
CENPS-CORT
CENPS
USP16
RWDD2B
LSM5
AVL9
ANAPC11
ALYREF
SENP5
NUP133
RNF166
CTU2
INTS1
PHF5A
ACO2
ZACN
SRP68
GALR2
TIMM22
BMS1
CTCF
ZNF212
RRNAD1
ISG20L2
TSSC4
ZNF514
ZNF2
DOK3
DDX41
CIAO3
STIL
DDX21
DNAJC30
BUD23
TIMM9
KIAA0586
TAF11
ANKS1A
UBOX5
FASTKD5
SEC13
UMPS
CEP128
NOL8
CENPP
SPATA25
NEURL2
CTSA
LYRM4
FARS2
ZFAND2A
ZSWIM1
STARD10
POLR1F
C15orf40
NSUN5
PRR5L
COMMD9
CCDC43
FAM161B
COQ6
NDUFB3
FAM126B
IBA57
SMC2
RPUSD4
FAM118B
SREK1IP1
CWC27
GTF2H3
EIF2B1
MYNN
ACTRT3
AAR2
PRSS22
VCPKMT
UBE2V2
C16orf95
KNTC1
PSMD3
NSA2
GFM2
NDUFC2-KCTD14
NDUFC2
POMZP3
TELO2
PTX4
BUD13
LOC102724770
DGCR6
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RTF2
KLHDC4
SDHC
MPZ
WDR24
STUB1
JMJD8
VPS13B
PGP
MLST8
CASKIN1
BRICD5
ZDHHC6
VTI1A
TRDMT1
MED4
DDX49
COPE
PSPH
CCT6A
HNRNPA0
TCTN2
BRIX1
VMO1
PSMB6
GLTPD2
TEDC2
RTN4IP1
QRSL1
ZKSCAN4
NKAPL
MRPS30
SMN2
SMN1
SUPV3L1
COA6
MRPL20
CCNL2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
SZRD1
CWC22
RBM42
TONSL
TSN
EMC4
FUBP3
WNK4
VPS25
C5orf51
CWF19L2
RBBP5
PIK3R4
STK36
RNF25
UBL5
FBXL12
TMED4
DDX56
POLR2J
UBE2L3
SNRPB2
ATP5MG
ANAPC5
WDR25
WARS1
EIF3F
CCDC97
ZNF268
MFN2
TMCO6
NDUFA2
IK
LIN7C
CENPF
RNF26
C1QTNF5
PPP1R11
POLR1H
MRPL3
COA8
BAG5
IQCH
AAGAB
MAMDC2
TEKT2
ADPRS
THAP10
LRRC49
PUS10
PEX13
PIGL
NCOR1
RAB24
PRELID1
MXD3
NCBP2AS2
NCBP2
DDX11
PLEKHN1
NOC2L
KLHL17
ZCCHC4
CACTIN
PEX3
ADAT2
ZNF696
TRIP4
PCLAF
RCE1
RPS6KB2
PTPRCAP
BBS10
ZNF23
GSTT2B
GSTT2
DDTL
DDT
PRPF18
VPS52
RPS18
B3GALT4
DNAJC19
RBM8A
PEX11B
YIPF2
TIMM29
ZSCAN25
AARS2
WWP2
NOB1
FAM207A
SPC25
PGGT1B
AMBRA1
ZGPAT
ARFRP1
ZNF263
ARFGEF2
TMEM126A
MRPS2
C9orf116
MZT2A
NOM1
AURKAIP1
CLPB
LARS2
ERGIC2
RPP30
ITGB3BP
EFCAB7
NDUFS7
PDHX
APIP
TOMM6
PRICKLE4
FRS3
CENPH
MNAT1
FIGNL1
LRRC47
RANBP6
KIAA2026
ZGRF1
LARP7
ZC3H3
RNASEH2C
KAT5
PSKH1
NRN1L
UBA5
ACAD11
DPH7
ZNF777
PTCD3
POLR1A
MAN2C1
COMMD2
ZMPSTE24
TMCO2
PEX12
AP2B1
SRPRA
SLC24A1
INTS14
PPIL4
MON2
RHEBL1
KMT2D
POLE3
C9orf43
ALAD
FASTKD2
METTL14
VPS37A
CNOT7
SOX15
MPDU1
LOC100996842
CD68
RAVER1
ICAM3
LAMTOR1
ANAPC15
DNTTIP2
TATDN3
NSL1
SGO2
HSPBP1
BRSK1
SAMD10
PRPF6
AKAP10
SNRNP35
TDRD9
ATP5MPL
P4HB
ARHGDIA
SKIV2L
NELFE
ZSCAN22
KLF1
GCDH
DNASE2
NOL10
SMG5
TMEM79
ZBTB17
BDP1
PROX2
POLR2J3
WDR36
HBS1L
TRMT6
MCM8
EDC3
MIS12
DERL2
HTATSF1
BRS3
USP14
FAM156B
FAM156A
SPSB3
NME3
MRPS34
EME2
DLAT
ZNF16
SMARCE1
LRPPRC
UTP15
ANKRA2
MLX
HSD17B1
COASY
NBEAL2
CCDC12
MAP3K7CL
CCT8
FAM187A
EFTUD2
CCDC103
VPS53
RBSN
SRD5A1
YJU2
METTL18
C1orf112
ATP6V1G1
C5orf15
ZSWIM8
FUT11
CHCHD1
MRPS16
DNAJC9
ZNF17
PWP1
POLR3B
HUS1
NDUFS4
NDUFAF5
ESF1
TSEN15
ZBTB45
SLC27A5
PITX3
GBF1
METRN
HAGHL
CCDC78
ANTKMT
SPOUT1
WDR83OS
WDR83
MAN2B1
SF3A3
TWNK
MRPL43
LZTS2
BIRC5
SIRT3
PSMD13
RBM28
NOP16
HIGD2A
TUBD1
RPS6KB1
KCTD5
TBCCD1
DNAJB11
ASB6
CCNT1
MRPL44
ING4
MRTO4
EMC1
THBS3
MTX1
CENPW
PSMB2
GINS3
TRUB2
COQ4
PCYT1A
IKBIP
APAF1
MRPS28
PHKA2
TRIM65
MRPL38
EXOSC2
C6orf47
BAG6
APOM
PSD
FBXL15
OTUB1
CDK11A
NDUFB8
HIF1AN
CEP20
ALG8
ARMC1
MTFR1
TMEM109
PRPF19
VAMP3
KDM4D
CWC15
RHBDL1
THAP7
SMU1
NOP58
SNRPD3
GUCD1
RFC1
MTRNR2L1
COG2
MRPL1
MRPS23
WASHC5
NSMCE2
PLEKHM3
SSBP1
INKA2
DDX20
NUGGC
ELP3
NUP153
RBL1
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
PEMT
BNIP1
SKA3
MRPL57
DCPS
TIMM13
LIN52
ALDH6A1
UBXN11
PSMD12
ZNF623
ZNF75A
TIGD7
MRPL16
PITPNM1
ZNF789
ATP5MF-PTCD1
ATP5MF
PPP2R3B
WFDC3
DNTTIP1
TTC31
CCDC142
NUDT1
MRM2
MAD1L1
RFNG
GPS1
BLOC1S2
FBXW2
FBXO38
MRPL4
TAF2
LIM2
THUMPD1
MRPL2
KLC4
CUL7
PISD
ZNF839
RPS5
RPL27A
TAX1BP3
EMC6
FANCF
MDM4
THNSL2
SRRD
HPS4
EIF4B
FAAP20
RPS26
SPRTN
EXOC8
SLC33A1
LTN1
LTV1
TMED10
VPS26B
NCAPD3
C18orf21
RPLP2
PNPLA2
PIDD1
HARBI1
ATG13
PSMC6
EMC8
COX4I1
COMMD4
PSMD2
SLF1
KIAA0825
TBC1D15
TMUB1
FASTK
AGAP3
SETDB1
RARS1
UBFD1
EARS2
ZNF207
C17orf75
NOL11
METTL2B
SEC24C
TSPAN19
LRRIQ1
CCDC137
CSE1L
PDE6G
MTIF2
SENP2
NVL
PITHD1
SLC39A7
RXRB