ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
KIF5C
MTRNR2L2
MSH3
DHFR
HTR5A
MTRNR2L8
XKR7
IQSEC3
LIN28A
EPN1
RTBDN
MAST1
NKX1-1
DUX4
HPCA
NUP214
CEBPE
LMLN2
TUBA1A
SPTAN1
RBM48
PEX1
ZNF335
INSM2
FAM24A
MICAL3
TDRD7
MTRNR2L9
RFX1
CPLX2
EIF2D
SFSWAP
L1CAM
SUMF1
TMEM101
PYY
NAGS
MTRNR2L10
SYT11
GON4L
FRG2
EPHA10
PDE4A
NACAD
SMIM17
RGPD2
RGPD1
RIMBP3C
RIMBP3B
NCLN
S1PR4
RIMBP3
NACC2
TOP3B
RIPPLY2
CYB5R4
DIO1
MTRNR2L1
ZNF23
ZCCHC7
CHGB
MACIR
UBE2L3
UBL5
TIGAR
PIN1
DLGAP3
RAB42
CACNG3
NBPF1
P2RX6
CADM3
MAPK8IP2
CKMT1A
OSCAR
NDUFA3
PPIP5K1
CKMT1B
PTPRN2
CELSR3
MANEAL
NPPB
UTP20
MFSD4B
NAGPA
BARHL1
ART1
PRAME
CLVS1
GSC2
GPR158
SCG3
NUCKS1
FAM72C
COL23A1
NEU1
PSMD9
HPD
UFD1
CDC45
SHFL
SNAP25
TJP3
SDC3
GET3
MTRNR2L6
PAQR4
KREMEN2
RTL10
GNB1L
GJD3
TTC9B
CCNP
EMILIN2
PICK1
ADCYAP1
UNC13A
MEGF9
USP30
SVOP
ZC3H18
RBM19
TMEM181
ERCC1
ANK1
CIZ1
SLC18A3
CHAT
FIBCD1
USP35
KCTD21
GNB4
SPATA2
FBXO5
UQCR11
TRAF1
MAPK1
SCRT1
DGAT1
ANKHD1-EIF4EBP3
ANKHD1
TPBGL
TTC38
PKDREJ
TOMM22
DHX40
NEK6
GTPBP6
KCNH7
TEKT2
ADPRS
VPS37D
GPR78
CEACAM16
MUC3A
CRKL
RTN3
ATL3
UBE2O
AANAT
SLC6A6
PGBD5
PPFIA3
C19orf73
LIN7B
RAB37
PPP1R35
ZCWPW1
MEPCE
ACBD6
VARS1
TRMT1
NACC1
KLHL18
KIF9
PHRF1
SETD1B
WASHC2C
C1QTNF8
KIF18B
CYRIB
GFOD1
COL6A5
GTF2H3
EIF2B1
MRPL40
HIRA
FEM1A
MICALL2
FHL3
TSR3
GNPTG
UTP11
TRIP13
BRD9
CASTOR2
CDKN1A
GPR107
FNBP1
DYSF
CHRM4
GBA
NBPF3
PDE4C
RRM2
TSPOAP1
C6orf136
DNAJC11
ADAMTS14
SST
TSPAN13
YPEL1
ESCO2
LHFPL4
PCBP3
YTHDF1
IDH3B
METTL2B
IER5L
LPIN1
UBE3B
SRGAP2B
FAM72D
TSEN2
MAMDC2
CRBN
RAP1GAP
RFC1
CREG1
ARHGAP28
HNRNPD
WASHC2A
ANKRD36C
CTPS1
RRP15
C12orf66
ODF2
TMEM121B
RASGRP2
NUP35
VPS37C
DYNC2I1
ESYT2
SGSM1
RABIF
DPF1
RPA2
FOXA3
SYMPK
INPP5B
DHX37
BRI3BP
CDCA8
C1orf109
IL1RL1
SLC25A24
SRGAP2
FAM72A
SEBOX
QTRT1
TMEM199
POLDIP2
CCDC92B
KCNK12
NFIC
FRG2C
SYNJ2
HSD17B1
COASY
MLX
SPDYE14
SPDYE10P
WSCD2
SLC4A1
LCMT2
ADAL
DNAJC6
SOGA1
POU5F1
CDC7
TCF19
CCHCR1
BRAF
CBX8
S100A8
EPC2
S100A7A
NRCAM
BOD1
TIMM10
SMTNL1
TRAPPC2L
GALNS
SPDEF
C15orf39
MAST3
IL12RB1
PHC2
ZC3H15
TRAIP
VPS50
HEPACAM2
NAXE
GPATCH4
TAS1R1
NOL9
NAT10
PPIL2
CDK11B
EML2
COLGALT2
CRNKL1
CFAP61
PAFAH2
NOP16
HIGD2A
KTI12
ACVR2A
SMYD5
CHST12
PIK3CD
MRPS26
GNRH2
ITPR3
SLC39A7
RXRB
RING1
HSD17B8
EBI3
CSRNP1
ITGAV
ACE
LRRFIP2
ALX4
SLC12A9
PUS7
GRPEL2
PDLIM7
KCTD15
GATA1
SPNS1
LAT
RSPH14
RAB36
ASNS
C8orf33
GPATCH3
GPN2
ST6GAL1
CRYAA
CRYAA2
NBPF15
CD19
RABEP2
AMER3
ZNF503
BUB1B
AP3B2
TSTD2
NCBP1
ZBTB32
NOS3
NOL6
CLK3
DNA2
CCDC116
KCNH2
FABP6
CA4
CBLL1
IBA57
OGDHL
LRP11
CMIP
SCGN
CASZ1
SRXN1
AKT2
NTAN1
APOC3
APOA1
SLC27A4
HEXA
LTV1
ARID3A
KISS1R
R3HDM4
PGPEP1
DGAT2
GATB
JUNB
HOOK2
CHCHD1
XPC
LSM3
GRM1
DRD2
TAP1
PSMB9
PSMB8
TADA1
NDST1
FUT11
LOC388282
KIFC3
SNAP29
PI4KA
LYSMD2
DRG2
RPP25
PMS2
AIMP2
MARCHF11
CD83
AEN
ZFYVE26
RAD51B
GADD45B
PDE6D
COPS7B
PSME3
BECN1
THAP7
OXNAD1
DPH3
KLHL21
TARBP1
RCCD1
TMEM191B
VTA1
NMBR
PRRT3
ODF3L2
UBIAD1
KAT6B
GAS8
ZFYVE1
C20orf204
SETD1A
ORAI3
CRH
IQGAP2
PNPLA6
FAM78A
PYCR3
GFUS
PMF1-BGLAP
PMF1
CLN6
EXOSC2
DGCR8
NXPH3
OAZ3
MRPL9
PPIA
SLC38A10
SRRD
HPS4
CNNM3
PERP
XRCC2
AGBL3
ZSCAN30
TRMT2A
RANBP1
PRELID2
AIF1L
NME1-NME2
NME1
THOC3
BCAT1
HSPA1B
STOX1
C16orf89
ALG1
CDC25B
CNOT4
ZGLP1
CENPB
FDX2
CCDC200
NFE2L2
DUSP1
SFT2D3
ATP5PO
FCHO1
NSMAF
GRIK1
EAPP
PDE1C
IMMP2L
MAPK12
OR2L13
OR2AJ1
LUC7L2
ZNF596
IL4I1
FMC1-LUC7L2
FMC1
DGCR6L
SLC39A3
PWWP2A
PCNA
UBE2H
TMEM230
CDS2
CERS6
FNDC10
ZC3HC1
VAC14
TYMS
TYMSOS
EPS15
STX7
CCDC69
KDM4A
ASCL2
PKD2L2
OGFOD1
NUDT21
DGCR2
PPM1G
TSSK2
RBSN
HNRNPLL
SRSF7
ARRDC2
TRAP1
ANKRD36B
CXCL3
VHL
SPATA25
NEURL2
CTSA
MIS18A
ADARB1
RECQL4
LRRC14
LRRC24
MRPS11
MRPL46
MFSD3
DOLPP1
COTL1
C20orf203
FOXD4L1
CARD11
VPS33A
ZDHHC12
FBXL12
ATP6V0E2
TTC26
KCNJ14
GRWD1
KIF2C
HDAC11
GTPBP3
ANO8
SORBS1
CYP51A1
FAH
ANKRD63
SMIM11B
SMIM11A
DCLRE1B
AP4B1
SKA3
MRPL57
LINGO1
MRPL2
KLC4
CUL7
SRGAP1
CDC42BPG
TMEM70
ELOC
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
EBNA1BP2
CFAP57
GTF3C4
DDX31
E2F6
NR2F6
TMED1
OPRL1
EMC1
NOM1
MRTO4
RGS19
LKAAEAR1
FBXO21
RAB33B
GSTK1
SELPLG
TMEM242
MTFR2
YIF1A
TMEM151A
NUDT2
KIF24
PIGBOS1
PIGB
HRK
POLR3G
MBLAC2
PHF20
MYPOP
N6AMT1
DNTTIP2
TSEN54
LLGL2
CASKIN2
KCNN4
VPS11
JMJD1C
SAR1B
PIP4P2
TMEM191C
KLHL36
SUFU
ACTR1A
TMEM204
TRUB2
COQ4
C1orf159
KAT2B
NAGK
TCIRG1
NDUFS8
ZWINT
AGPS
MISP3
KIAA0895
BIRC5
ANLN
SYNJ1
LCN8
LCN15
LCN6
SDF2L1
H2BU1
H2AW
MYT1
LRRC8B
TBX1
DHDDS
MFSD1
CDK11A
NSUN5
URB1
HLTF
CCDC32
LZTR1
RPUSD2
AQP11
OAF
GLRA1
EIF3H
OIP5
NUSAP1
CNTRL
C5
ZNF75A
TIGD7
POLR1B
PHACTR2
CTF1
BCL7C
ZYG11A
CFAP73
PRSS16
PITPNA
ARID3B
SWSAP1
CYB561D1
WWP2
XYLB
MYCL
NOB1
MYLIP
TMEM210
LRRC26
ZNF74
OXTR
GALNT2
CPPED1
AGK
XXYLT1
CCSAP
TNFRSF8
CHCHD3
ATE1
TNFRSF21
RAD51AP2
AKAIN1
VSNL1
KLF1
GCDH
DNASE2
CCT2
ADGRE2
TENT5C
CENPE
ZNRF1
OSGIN1
MMP24
NSFL1C
PLK1
GPD1
COX14
VPS35
HACE1
NAE1
C3orf80
TRMT61A
CKB
CPNE9
MYO18A
ZNF280D
EXOSC6
PAX4
DLK2
PAXBP1
FBXO4
SARS1
RNF141
USP48
ZKSCAN4
NKAPL
ZNF398
TMEM184A
SPHK2
RPL18
FAM83E
GPC6
HACD3
STIL
CRELD1
RARG
TMEM51
SRSF10
RNF187
MARCHF4
UTP25
C5orf51
COMT
TXNRD2
WASL
FRMD6
FAM181B
TOP3A
SMCR8
THEM6
TTF2
ANKRD36
GALNT11
ZNF595
B3GNTL1
CFAP298-TCP10L
CFAP298
SFT2D2
CBFB
KAT5
RNASEH2C
TBC1D22A
GLIS2
PTPRB
CDKAL1
CREB3L2
TRIM67
GSDMD
ZFYVE19
DNAJC17
ANXA7
CFAP299
NUDT3
BRAP
ACAD10
ECI2
SNX8
MXRA7
TDRKH
DHH
GAREM2
ID3
PLD1
CMPK2
TBC1D5
HEXD
CMC2
GGCT
NPIPA3
NPIPA2
ITPR2
CENPN
EHD2
PLLP
BIRC6
SSBP1
RDH5
ITGA7
BLOC1S1
QKI
RAB39A
H1-10
ZMPSTE24
STX11
ITSN1
CRYZL1
RTTN
OXR1
SDF4
B3GALT6
POLR2J
NOL7
SPOCD1
DMTN
GPATCH1
VARS2
GTF2H4
SOD2
C16orf71
ANKS3
AKAP1
MCUB
C22orf39
ACAT2
RBBP8NL
SCAF11
RBM28
EEF1AKMT3
METTL1
CYP27B1
RAD51
GAA
SAMD13
GFI1
STK40
ZBTB16
GSN
RAB14
CAMTA1
ZNF555
ZEB1
KCTD18
POLR3H
ZNF77
TPH2
STAT1
ASMTL
KXD1
ZNF581
ZNF580
STX16
NUF2
FANCD2
ASF1A
SRA1
SLC35A4
APBB3
DNAJC5
CCDC106
LOC102724770
DGCR6
SCFD2
NEIL3
TIPARP
POLR2J3
VIM
AFAP1
U2AF2
IFT46
ARCN1
LARP1
RAD23A
CALR
FARSA
TRIP4
PCLAF
TTLL4
SPOP
INTS12
GSTCD
SMG8
D2HGDH
PRRC2B
TAS1R3
HAGH
FAHD1
FAM227B
DTWD1
TM9SF1
IPO4
EIF1AD
CST6
BANF1
AHCY
CENPP
TMEM262
NEUROD4
WASHC5
NSMCE2
COMMD2
RHEBL1
PSEN2
PRR5L
COMMD9
TXLNA
PRR14
FBRS
TBC1D19
NEK2
PGAM5
RINL
NOL8
CCNA2
GTF3C3
C2orf66
NUP107
ITGB3BP
EFCAB7
HMGB1
P4HA1
SUPT7L
SLC4A1AP
PEX3
ADAT2
WDR36
HDAC2
CDK5RAP1
RBBP5
TTC24
IQGAP3
WDR74
STX5
EXO1
CFAP54
ATG14
SPDYE7P
POM121
CCNG2
ENPP3
TMEM248
STX18
RABGAP1L
CCDC107
ARHGEF39
PKDCC
SIT1
SEPTIN9
CDT1
KDM2A
ZSWIM1
TSFM
EIF3F
KCNB1
METTL15
KIF18A
APRT
PDXK
SF3A3
USP54
UNG
ALKBH2
COX16
UBFD1
EARS2
SMARCD2
MTF2
MED23
PLEKHM3
SGO1
WTAP
KIF20A
BRD8
RPS7
FXN
RRP12
TACO1
CENPF
NCAPH
ITPRIPL1
SEC24B
CSTF1
AURKA
HIBADH
SAP30BP
RECQL5
SHC1
CKS1B
LRRC59
COX6A1
MRPL44