ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116423 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◣ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

KIF5C
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
LIN28A
DUX4
MTRNR2L8
CEBPE
LMLN2
NBPF1
IQSEC3
RBM48
PEX1
PPP1R35
ZCWPW1
MEPCE
EPN1
NKX1-1
FAM24A
INSM2
PTPRN2
MTRNR2L1
NUP214
TMEM101
PYY
NAGS
RIPPLY2
CYB5R4
XKR7
FRG2
NAGPA
ZCCHC7
PDE4A
SPOP
DIO1
NOS3
IBA57
RTBDN
MAST1
UBE2O
AANAT
NPPB
TJP3
EPHA10
UTP20
GET3
ZC3H18
GPATCH3
GPN2
XKR9
LACTB2
SMIM17
LCN8
LCN15
LCN6
CELSR3
KCNH7
EIF2D
SPNS1
LAT
LPIN1
PKD2L2
RNF187
PDE1C
GBA
TTC26
ZNF335
CPPED1
DPF1
UBL5
PIN1
TTC9B
CCNP
SUMF1
RBM19
ART1
CA4
DHX40
DLGAP3
SMG8
TMEM204
TMED1
NACAD
HPCA
CRBN
RTN3
ATL3
UTP25
RFC1
NCLN
S1PR4
SLC44A2
DOCK6
CACNG3
ADAMTS14
RGPD2
RGPD1
KLHL18
KIF9
DRD2
OSCAR
NDUFA3
TRMO
CELF6
PICK1
B3GNT3
RAP1GAP
SCG3
TCIRG1
NDUFS8
DPH2
ATP6V0B
FOXA3
SYMPK
DIABLO
UBE3B
CEACAM16
CRKL
KPNB1
NSUN5
TNNI3
DNAAF3
PRAME
ANK1
SETD1A
ORAI3
MICAL3
PPP1R7
PASK
CPLX2
RIPOR1
NUF2
P2RX6
EBI3
HEXA
UBE2L3
GTPBP6
ERCC1
PRG3
SYT11
GON4L
CAPN2
FHL3
UTP11
RSPH14
RAB36
TYMS
TYMSOS
LSR
STEAP1B
ZC3HC1
VPS50
HEPACAM2
CELF3
CDK5RAP3
SPTAN1
RXRA
PPM1F
NBPF3
IQSEC1
UFD1
CDC45
PAFAH2
UBE2H
MAMDC2
HAGH
FAHD1
QTRT1
DNAJC11
TKT
ZNF23
ZDHHC24
ACTN3
PTPRH
EVI5
MEGF9
CHGB
GPR107
FNBP1
SLC29A3
CAMTA1
TRMT1
NACC1
THAP7
ZNF280D
RTL10
GNB1L
N6AMT1
NRCAM
TIGAR
EIF3H
NFIC
PHRF1
AP3B2
BARHL1
RFX1
COL23A1
POLE4
TSPOAP1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RAB42
VPS37C
TIMM10
SMTNL1
NDST1
CCDC116
PRKCSH
CCDC151
TRIP4
PCLAF
ATG14
RAB40B
DNAJC18
SARS1
GADD45B
FCHO1
PDXK
CALB1
LCLAT1
SFSWAP
SMARCD2
TOP3B
HSD17B1
COASY
MLX
SOGA1
IDH3B
TAS1R3
PAF1
DVL1
MARCHF8
CDC42BPG
WASHC2C
CENPS-CORT
CENPS
SNRNP25
POLR3K
PDE4C
POLD3
ADGRB2
TSEN54
LLGL2
CASKIN2
GAS8
TMEM242
PRRT1
PPT2
COA7
DCANP1
TIFAB
EIF4EBP1
TASOR
BAIAP3
NRROS
TTC7A
MCFD2
CYP21A2
EXO1
VPS37D
RPS13
RARG
KTI12
RPA2
HSH2D
USP54
MRPL40
HIRA
PRR5L
COMMD9
CPNE9
C8orf33
UBN2
SPATA2
EGLN1
MOCS3
DPM1
AATF
KAT2B
QKI
XYLB
CCDC69
VWA7
GNB4
TK2
CKLF-CMTM1
CKLF
PI16
HMGN2
SYCP2
PPP1R3D
FAM217B
TLCD3B
C16orf92
MICALL2
EPC2
ALDH4A1
SCRT2
TNFAIP8L1
RCN3
TDRD7
GSN
RAB14
ZNF555
ZEB1
KCTD18
RAB37
FRG2C
POLR3H
ZNF77
CCDC200
TPH2
STAT1
SNAP25
MARCHF4
USP30
ASMTL
KXD1
ZNF581
ZNF580
STX16
PDE6D
COPS7B
NME1-NME2
NME1
FANCD2
CADM3
ASF1A
ARID3B
SRA1
SLC35A4
APBB3
SLC39A3
SVOP
DNAJC5
CCDC106
CDKN1A
EAPP
LOC102724770
DGCR6
SCFD2
NEIL3
TIPARP
POLR2J3
VIM
WASHC2A
AFAP1
U2AF2
IFT46
ARCN1
LARP1
RAD23A
CALR
MAPK8IP2
FARSA
TTLL4
MTFR2
RRP15
SSBP1
SCRT1
INTS12
GSTCD
SPATA25
GLRA1
D2HGDH
PRRC2B
DGAT1
L1CAM
VPS33A
FAM227B
DTWD1
TM9SF1
IPO4
EIF1AD
CST6
BANF1
AHCY
NEURL2
CTSA
CENPP
TMEM262
NEUROD4
WASHC5
NSMCE2
COMMD2
RHEBL1
DHDDS
PSEN2
KIF18B
BUB1B
GATB
TXLNA
PRR14
FBRS
TBC1D19
CRNKL1
CFAP61
NEK2
PGAM5
RINL
NOL8
CCNA2
GTF3C3
C2orf66
NUP107
KIAA0895
BIRC5
PSMD9
HPD
ITGB3BP
EFCAB7
HMGB1
P4HA1
SUPT7L
SLC4A1AP
SOD2
ESCO2
SEBOX
PEX3
ADAT2
WDR36
HDAC2
CDK5RAP1
RBBP5
MTRNR2L9
TTC24
IQGAP3
GPR158
WDR74
STX5
CFAP54
TSR3
GNPTG
SPDYE7P
POM121
CCNG2
ENPP3
TMEM248
FBXO5
STX18
RABGAP1L
CCDC107
ARHGEF39
PKDCC
SIT1
RBM28
SEPTIN9
TDRKH
CDT1
KDM2A
JUNB
HOOK2
ZSWIM1
TSFM
EIF3F
KCNB1
METTL15
KIF18A
APRT
PAXBP1
SF3A3
UNG
ALKBH2
COX16
UBFD1
EARS2
MTF2
MED23
PLEKHM3
MIS18A
SGO1
WTAP
KIF20A
BRD8
RPS7
FXN
RRP12
USP35
KCTD21
TACO1
CENPF
DRG2
VTA1
NMBR
NCAPH
ITPRIPL1
PGBD5
SEC24B
TOMM22
CSTF1
AURKA
HIBADH
SAP30BP
RECQL5
SHC1
CKS1B
NFE2L2
LRRC59
COX6A1
MRPL44
UBC
PBK
GOLGA7
EEF1AKMT3
FLAD1
PWWP2A
TIMM17A
LMOD1
CBLL1
ZNF830
CCT6B
NDUFS7
RTTN
CHCHD1
CERCAM
MTBP
MRPL13
DDX18
BEND3
TICRR
USP2
EBAG9
ZNHIT2
FAU
TMEM199
POLDIP2
METTL1
CYP27B1
MYBL2
PFDN4
NXPH3
CKAP2L
THAP9
SEC31A
DNPEP
USPL1
RGL1
ARHGDIA
NOTCH2
KDM5B
STAT3
LAMP1
TMCO3
TATDN3
NSL1
DCUN1D2
PHC2
WDR11
SEC13
ANKRD31
NUP54
FANCI
DCLRE1B
AP4B1
RPS19
NDUFS3
KBTBD4
ATR
FAM180B
ADAMTS17
TRIM24
VPS9D1
RTN4
PLEC
DYNC2I1
SNX1
CIAO2A
SPRED2
MTDH
GTF3C5
ZKSCAN8
NSUN4
ARPC5
STMN3
RTEL1
KHK
YARS1
S100PBP
ADNP
PPIP5K1
CKMT1B
POLR3F
DZANK1
PRRT3
DBNDD2
RRM2
RAE1
MTRNR2L3
TRAPPC6A
BLOC1S3
TROAP
MRM3
GLOD4
EMILIN1
FRMD3
TM7SF2
CCDC86
PSMC2
DNAJC2
SLC25A51
SLC25A40
DBF4
MRPS35
CYRIB
CDC6
VARS2
GTF2H4
ASIC3
SKA3
MRPL57
YIF1A
TMEM151A
TRIAP1
COMMD4
ANLN
EDC3
ZAR1L
BRCA2
RRS1
ADHFE1
CRYBG1
CORO7-PAM16
CORO7
AURKB
ZCCHC4
RBM47
PC
ICMT
HES3
GDAP1
UNC45B
SMIM12
NLE1
CAND1
MTIF2
ELOVL1
CDC20
NOTCH2NLA
LTV1
CCDC59
RDH5
ITGA7
BLOC1S1
KMT2D
ANAPC5
C12orf66
SPG21
XRCC2
POLR3GL
ANKRD34A
RNF166
CTU2
ATP5F1E
CYP27C1
KLHL20
TEAD1
PPP2R2C
STAG1
FAM207A
EBNA1BP2
CFAP57
LIX1L
NOP16
HIGD2A
RAD51AP1
C12orf4
SLC12A9
TXNDC9
EIF5B
TRUB2
COQ4
ZFPL1
SYTL3
CDCA5
RAD54L
VPS29
RAD9B
SRRM3
ATP6V0D1
AGRP
CCDC88A
CCDC77
SELENOH
WBP1
INO80B
DNTTIP2
FBXO4
MFSD1
XRN1
SNRPB2
TMEM41A
DLGAP5
HUS1
BHLHE40
FAM133B
MTRNR2L10
DNAJC25-GNG10
DNAJC25
TEX46
PRKAG2
KDM1A
DCAF10
PPM1B
NMNAT1
LZIC
DGKZ
SPAAR
HRCT1
CNOT3
SYNJ2
PSMD6
MXI1
ZCCHC14
ARHGAP45
PUS10
PEX13
BCAS3
ANKHD1-EIF4EBP3
ANKHD1
RARA
PIH1D2
NKAPD1
SLC39A7
RXRB
KIAA1586
ANTXR1
SSNA1
ANAPC2
OAZ3
MRPL9
UBE2Q1
CHRNB2
TTC27
YTHDF2
MAD2L2
NUDT15
MRPL39
KRR1
MRPS18C
KLHL32
HELQ
POLR2J
NOL6
GSC2
DNAJC6
SYNJ1
LHFPL4
PALM2AKAP2
GTF2H3
EIF2B1
VPS72
PIP5K1A
TRMT6
MCM8
CEP55
LSG1
ID1
GLI4
AEBP2
OLFML2A
ELMO1
OGDH
TMEM222
PUM3
BOD1
RBM42
KCNJ14
GRWD1
SASS6
VRK1
SUGCT
MPLKIP
CCNB1
TFIP11
CYB5A
INKA2
CLK3
RAB18
PARD6B
FAM98B
TEFM
EXOSC5
BCKDHA
TTC31
CHRNA1
CCDC142
NDUFAF5
ESF1
F11R
BNIP1
ICAM2
AAR2
DMAP1
SMIM5
PCNA
NEK6
EMILIN2
BNIP3L
MACC1
SST
TEKT2
TBC1D30
MOK
IPO11
DIMT1
ADPRS
ANXA5
KAT5
CWC25
NUP42
ERG
FRA10AC1
PSMD3
ENOSF1
CLVS1
NSA2
GFM2
C10orf88
TEDC1
FAM240C
NOP53
KNTC1
CCDC146
ASF1B
C2orf42
WDR4
SLC45A4
NUP35
WDR70
NUP155
DAZAP1
CKMT1A
C1orf159
TMED9
RAD51
BLCAP
ZHX2
TPCN1
ZSWIM8
NOTCH2NLB
SLC33A1
KCNN4
BAIAP2
PIKFYVE
GPSM1
MRPL27
EME1
SEC22B
NEMP1
NTSR2
MCM10
CDK7
E2F1
SGO2
INTS7
DTL
H6PD
SDAD1
NGDN
AP3S2
DNAH7
ZNF668
ZNF646
KCTD5
LRIG1
C2CD5
ACVR1
CUEDC1
RING1
NDUFAF4
MRPL21
IGHMBP2
HSD17B8
ZBTB45
B4GALT7
NR6A1
CHSY1
ATG9B
TMEM120A
PEDS1-UBE2V1
PEDS1
DPY19L4
ZNF398
DHX37
BRI3BP
NDUFC2-KCTD14
NDUFC2
MRPL10
LRRC46
NET1
MRPS15
CFAP299
RGS14
LMAN2
MRPL3
DUSP1
STEAP2
SLC25A45
KLF1
GCDH
FRMD8
DNASE2
MIS18BP1
KIAA0895L
EXOC3L1
E2F4
ARHGEF12
TMEM181
MRPS23
SH3GLB2
FAM228B
FAM117B
PSME3
BECN1
RNF181
DBNL
ST6GAL1
MRPL48
SMIM30
SERPINB6
PSMB7
SMN2
SMN1
AEN
ZNF391
DENND2B
TOP3A
SMCR8
WBP1L
PARPBP
NUP37
CENPW
GATAD2A
TBRG4
CRIP1
TSEN15
SWSAP1
THAP10
LRRC49
HNRNPF
DZIP3
CIP2A
URM1
H4C15
H4C14
H3C15
H3C14
FAM98A
ZDHHC12
SLC44A1
PPFIA3
C19orf73
PRCP
DDIAS
AGK
RNASEH2C
PPCDC
POLM
ZNF207
C17orf75
FAM72C
MCM7
AP4M1
SH2B3
DCAF4
CDC73
PPP1R18
NRM
ARID3A
MMP24
MFSD14A
GTF3C4
DDX31
CLCN3
NFXL1
ALKBH3
GTF2H2C
TCTN3
PSMF1
POLD1
NR1H2
ZGRF1
LARP7
TAF13
PNPT1
ZNF331
CDKN2C
KIF2C
ZNF558
TBC1D16
U2SURP
SCP2
SLC19A1