ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX701961 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◣ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

SNX12
KMT2A
ZFP64
WDR74
HOXC5
ZNF76
CXCL9
DUT
HOXA3
AP1M1
INTS9
HMBOX1
HOXC6
HSPE1-MOB4
HSPE1
HSPD1
RHOH
NFKBIZ
SLC30A10
GUCY2C
EPRS1
ZBTB45
HES1
MALRD1
HOXC4
TRIM2
ZNF143
ISX
C1orf226
ANKRD40CL
HK1
NEK2
HOXA4
DEPP1
FGFBP1
STX16
CDH17
TSPAN8
SPRED2
APOA2
UGT2B10
SH3D19
CLRN3
KRTAP3-1
GSDMB
ALG10
CYB5D2
TBL1X
ZNF226
DUS4L-BCAP29
DUS4L
COG5
CASP4
HEPH
DUSP18
SIRT4
YAP1
SLC17A4
MAVS
ADGRE5
CDHR5
SEMA3C
ROCK2
PDE4D
RBM47
ACOX2
ATF3
SEC23A
RBM39
RBM25
NXPE2
TMPRSS4
TM4SF4
PIK3C2A
MATR3
ARHGAP45
GCNT4
CDK5RAP1
RNPEP
HNMT
MCTS1
CASP5
TUT1
MBNL2
ARHGEF12
ADGRF4
LRRC59
SOX30
C5orf52
NWD1
H4C12
RNF145
NFAT5
E4F1
TFPT
PRPF31
LIMA1
MRPL44
MTRNR2L8
TMEM69
GPBP1L1
ENGASE
CXCL2
TPD52
MGAM2
UBR2
STAT3
MAIP1
TOB1
HACD2
CCDC186
ATP2B4
MIA3
GSN
ARHGAP27
COX16
CALML4
ARHGDIB
AMACR
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HNF4A
CTSB
KRT20
TTI2
IFRD1
CCDC90B
JMY
INTS4
FOXN3
ZNF341
H2AC19
H2AC18
GRAMD2B
SLC45A4
LRRC31
PPIL3
NIF3L1
MEP1A
AJUBA
ZFP62
MRPL21
IGHMBP2
PPP1R3D
NUF2
FAM217B
NR0B2
SLC3A1
GBA
ZNF721
PIGG
TCF20
SCAF11
CASC3
ZMPSTE24
PI3
ADAP1
KMT2D
HOXB4
NCOA5
C12orf57
ADNP
SLC12A7
RGPD6
RGPD5
TRIM15
ADD3
PCK1
TATDN3
NSL1
INTS5
GNA14
SRI
POLR2J3
SORL1
BTNL3
SLC33A1
MMACHC
METTL25
CCDC59
OIP5
NUSAP1
UTP3
UBB
AMOTL2
IL33
ALG10B
LMO7
CDC14B
FURIN
SYBU
LRP2
YWHAZ
RNF43
CACHD1
JMJD1C
PRPF19
RABEPK
MARCHF8
UEVLD
MADD
CALM2
ZNF501
ZCCHC8
ADARB1
KNL1
YAE1
TAOK3
LGALS4
RIC8B
PIK3AP1
ADGRG1
ZNF510
HHLA2
SRP9
SPOP
RAB3C
THAP1
OGFOD2
RDH11
NOSTRIN
MARK2
ACCS
SNX5
MGME1
CGGBP1
C3orf38
STAT1
EIF3D
MBTPS2
GOLPH3
EIF3F
BRCA1
CFAP69
BCAP29
NNMT
USP30
NPAS4
SLC11A2
UGT1A8
TPX2
SPATA2
ARHGEF38
OGT
GPA33
EMC9
BATF
SMG7
HOXB3
PSMD3
DDX23
MGAT4A
CEP120
NFE2L2
OR9Q1
TAPBPL
MOB4
DNPEP
SYNE3
KCTD5
UBXN1
FRA10AC1
TJP2
PPIL1
MAB21L4
CBFA2T2
NDUFS7
LDHA
STK31
KAZN
TMEM114
S100A2
PREPL
IBTK
HEXIM2
KHSRP
TINAG
TEFM
KRT8
SH3TC2
ELP3
TM9SF3
RAPGEFL1
MYO7B
MUC20
VIPAS39
AHSA1
TSPAN12
IQCF1
ARL14
ANXA11
SYTL2
VWA2
DAGLB
BANP
LRRC10B
PIH1D1
CDCA7
UGT2B7
TES
SLC7A6
RAB5B
EHF
VILL
CYP3A4
XDH
TMEM60
PHTF2
ZNF512B
SNX17
MRO
EIF2B4
H4C11
ZNF577
PRSS23
MYL6B
TACO1
ZGPAT
ARFRP1
ZNF384
CSNK1E
NR1D1
MRPS16
HOOK1
HEPHL1
ZNF770
GSTO1
DDX41
PHF8
H4C14
SLC25A45
FABP1
BCAR3
SMIM31
DKK3
SHF
NOX1
TMEM126B
DLG2
EIF2AK2
BUD13
AKR1E2
MAZ
KBTBD8
BLCAP
HAL
GTF2H2
EMP1
NCAPD2
MRPL51
RPL38
UBAP2L
SYMPK
DLL3
C1orf43
TRMT1
RTTN
STAT6
PHKG2
CBLB
ARIH1
MKRN2
UBE2J1
TCIM
NR5A2
CFAP45
TOB2
MRPL53
SMUG1
SPINK1
YWHAB
FEM1A
LEKR1
IDH1
ZSWIM3
NOTCH2
ARMH3
ACOT8
TRMT61B
PMVK
GOLGB1
TM9SF4
GSPT1
FABP2
MUC13
DYNLT3
WDR36
STX18
SELENOP
CHPT1
AGR2
TMEM230
TOP3B
SUPT7L
SLC4A1AP
DNMBP
CYP4X1
ABLIM1
KLRC2
VSX1
TYMSOS
TYMS
THAP10
LRRC49
CCNL1
TMEM248
SKIL
MRPS15
ETFB
CCAR2
MBNL1
DCP1A
ANKRD17
ZNF438
CCNI
USPL1
MTF2
KDSR
HMGB1
CYP3A5
CTNNBL1
CLPB
ZNF484
PEX3
CTU1
ADAT2
RAD51B
MRPL11
MMP1
BBS1
SULT1C2
RAB30
GSKIP
SH3BGRL2
PCBP2
ACVR1
DCTN3
MRPS31
SMG5
SALL4
PIF1
OPA1
TMEM41B
HPN
HIBADH
MRPL30
MITD1
ZW10
VPS52
RPS18
U2SURP
KPNB1
GMDS
CCDC174
ZNF749
VWA5A
ZC3H10
TUBAL3
TRUB2
COQ4
CBLIF
PGBD4
EMC7
EIF3E
TRIP4
NMNAT1
LZIC
DPP9
CYTH1
TARBP2
SP2
SCNM1
LYSMD1
PPFIBP2
CRBN
ZBTB40
HNF1A
ERGIC2
TFDP2
RBBP5
MBD2
SI
AURKAIP1
SLC30A4
TBC1D19
PRR5L
IQSEC3
ZSCAN9
UGT2B15
SLC38A1
ACOT1
SERTAD3
KIAA0319
CXCL11
ZNF622
ZC3H6
HRH1
KANSL3
WASHC2A
MRE11
ANKRD49
PSMB4
MYADM
CWF19L2
SDHAF3
METRNL
LAMA3
TOMM7
TOMM40L
SEPTIN9
PRH1-TAS2R14
PRH1
ZNF248
VPS50
PLEKHM3
HEPACAM2
CRLS1
MRPS14
KLB
KHDRBS3
MRPL3
GALK2
CSDE1
COPS2
SLC51B
PRPF18
SLC46A1
ENKUR
DDX59
SELENOH
RPL23A
CPSF4L
ANAPC5
ALOXE3
RPS7
RETNLB
CXCL8
KIFBP
LRP6
DUSP6
MTERF4
G3BP1
DIS3
KAT6A
GTF2H2C
GTF2H2C_2
ZNHIT3
JUP
CDK12
AP3B1
WNK4
RTN4
POLDIP3
ANK3
ZNF789
YARS2
NCOA3
COA1
REG4
ZNF587
PPME1
PHF12
NDUFAF5
MTRNR2L2
ESF1
C2CD3
TMEM199
SYF2
POLDIP2
NUP58
MYL6
CFAP20
ALKBH3
STK19
PPIP5K2
NME1
DXO
ATP5F1B
APOBEC1
NDUFV1
ID1
TSR3
TMEM182
RPL27
NR1H3
GNPTG
CSTF1
BCL9
AURKA
ACP2
RAI14
NHSL1
MRPL19
ATXN2L
ZNF761
PDPR
KIF3B
ILF2
DUS3L
DPYSL2
SREK1IP1
SLC26A7
FDPS
CWC27
C17orf75
SPRING1
RNFT2
PLD3
IMP4
CCDC115
CAMKMT
C19orf47
STMND1
PLEKHG6
NODAL
FRYL
EPCAM
ADGRF2
TMEM125
ICE1
BMF
MANSC1
CS
TSFM
SLC18A1
REXO4
HERPUD2
TTBK2
BTNL8
ZNF362
ZNF219
SCAND1
MST1L
TNFAIP1
IFT20
COL5A2
ZC3HC1
CIAO3
TMEM123
RNF7
RASGRP3
GNAL
FGF1
CGRRF1
ZNF395
GALNT8
DDX39A
SEMA4B
RNF5
RASAL2
CHKA
ANKRD1
AGPAT1
ZNF25
INTS6
HOXB9
BFSP1
ZNF33A
TNFRSF10B
TARS2
PRELID2
TMEM139
PTCD3
POLR1A
ARF4
SNX19
OTUD7B
METTL3
EPC2
UBOX5
TMEM140
SF3B6
RANBP2
FASTKD5
FAM228B
CLDN4
PIGU
HEATR1
CKAP5
ZNF764
TFRC
SH3RF2
SEC16B
NRARP
NDUFC2-KCTD14
NDUFC2
NDUFA5
MTIF3
FASTKD1
DBI
C2orf76
VTN
TMIGD1
PKP4
PKIB
GULP1
GTF2IRD2
ACP3
SLC25A16
SF3B2
AKAP9
WDCP
UBE2Z
SLC10A5
KRR1
KBTBD7
H4C4
GARS1
ATP5F1E
SIDT1
SDHD
DNASE1
SC5D
MTMR4
RPL37
NDUFV3
MMP15
EVI2B
ZSCAN32
ZNF174
PSMD9
MAPRE2
KCTD3
HPD
C11orf65
ATG4C
PPP6R1
SYT8
SMIM30
RPS5
RALGAPB
PAFAH2
DPY19L4
DENND1B
TEAD4
WDR89
SLC25A36
SERPINA1
PRRC2C
MRPS33
IPO4
FKBP14
EHBP1
EAPP
DGCR6L
CTH
CTDP1
CPVL
ABT1
ZFHX3
PBLD
OGDHL
LCMT1
HNRNPH3
TXNRD2
NEURL2
H4C3
CUL7
CTSA
AATK
TRIB1
DLG1
TMEM242
TLN2
SNRPC
SLC30A6
PHB2
MAF1
FBXO28
COPS7B
DSTYK
CRADD
CLCN3
CAPN8
CAND1
BOLA1
URGCP
UBE2D4
TSSC4
SLCO2B1
MTG1
LIF
FMO4
VTA1
PNLIPRP1
PHIP
NMBR
BLOC1S6
AQP11
SNAP23
KCNIP4
FANCD2
ARHGEF28
SURF6
SECISBP2
MED23
CLNS1A
ST3GAL4
FAM227B
DTWD1
NOP16
HIGD2A
GTF3C3
FOXA3
CLDN12
RHOBTB2
PRORP
PPP2R3C
KDM1A
ARHGAP24
AAR2
TMEM167B
PLIN2
OTUD6B
MAF
GSK3A
TNIK
TJP3
PTDSS2
GOLGA5
ARHGAP32
ARFGAP1
TMEM177
RCE1
EXD2
DIDO1
ANKRD13D
SF3B5
PRDM11
POFUT1
PLAGL2
MEIS1
LASP1
H4C15
DENND4A
STT3A
DHRS7B
CHCHD3
CDC42BPA
ARL8B
SAR1B
PDSS2
MFAP4
INTS12
HSD17B4
GSTCD
LTN1
AARSD1
SCAF1
CYCS
ZSCAN30
SYNRG
SLC35E3
PPRC1
FERMT1
CREBL2
COG3
BTG1
APOLD1
HOOK2
CWC25
CASP8
WDPCP
USF1
TMEM97
SSBP1
POC1A
NAGK
MDH1
FCF1
ETV4
AREL1
ZNF337
ZNF276
ZC3H12D
VPS9D1
VCPIP1
NEURL3
MCM7
FBXL17
C8orf44-SGK3
AP4M1
ZC3H15
RETSAT
ELMOD3
CCDC88A
ATP5MF-PTCD1
ATP5MF
RAB5IF
EIF1AD
DIP2C-AS1
BANF1
BCL2L15
TXN2
LIN37
GPBP1
DMAP1
ATP5MC2
ZNF573
RPIA
LGMN
CLTC
CLEC16A
C12orf43
TIMM23B
TAMM41
RESF1
PLEKHG1
PARG
ORMDL3
FAM98B
EIF2B3
ASXL1
S100A16
RTEL1
RPS3A
PUS7L
PSAP
IRAK4
RUNDC1
PTGES3L-AARSD1
PTGES3L
KIAA1671
MRPL27
KDM5B
EME1
CMTR2
PALD1
DPAGT1
CNOT1
BAX
ZNF233
TTC36
TMEM259
PEX12
ZNF225
ZBTB20
SMAGP
SCOC
RSRC1
PPP1R12C
MRPL40
HIRA
STAU1
SHANK2
RPL24
LY6G6D
LSM4
FGFR4
FEZF1
SLC24A1
RSAD1
NRBF2
ERP27
BMPR1A
ARRDC4
ARID4A
STX19
MRPS17
DPP4
ATL3
ARNT
ZNF805
NPHP1
IFTAP
G0S2
ATP5MC1
ZNF317
TTC31
TMEM176B
TMEM176A
SNRNP70
FITM2
CPA2
ATP5MPL
UQCRFS1
RALGAPA2
PSMD8
MTIF2
MRM3
LARS1
JTB
GLOD4
CYP51A1
CIZ1
CCDC15
BCAS2
ARL17B
ARL17A
UQCRQ
TMED5
SSBP2
OVCA2
HBP1
GDF9
EIF4EBP2
CCDC18
WDR33
TSN