ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957405 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◣ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

SIRT1
TGIF1
SNX16
DLX3
TUBG1
RETREG3
THEM4
KDSR
INSYN2A
RICTOR
SNX25
NFKBIL1
ATP6V1G2
FAM172A
PRRG2
NOSIP
RNF103
CCPG1
C15orf65
RBPJ
EPB41
OVCA2
KMT5B
PRKAB2
CHD1L
BRAP
ACAD10
CMTM6
MTRNR2L2
TECR
DNAJB1
PPP1R12B
IL20
IKZF5
ACADSB
TOGARAM1
KLHL28
SKIL
ICAM2
WDR74
CPT2
ZNF571
ZNF540
CENPA
TMEM263
FBRS
DERL3
TBC1D7-LOC100130357
TBC1D7
MACIR
SARAF
COPS8
UQCRB
SP4
B4GALT7
SIAH1
DNAJB4
LMO4
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC35E3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SERP1
EIF2A
DECR1
TNFRSF12A
GNB2
REV3L
DCAF10
SELENOO
KAT6A
NFIC
ZNF592
KMT2A
MFNG
BET1
SLC38A9
ZBTB45
ZNF341
CNOT1
MMP10
CDKN2AIP
LENG8
NTMT1
SLC25A25
NAIF1
TMTC4
CALM1
AXL
GRIA4
ZNF609
FKBP1A
PDPR
TINAGL1
PRRT2
LRP6
CALM2
CLTC
GTF2B
NEDD9
ID1
ASB8
ME3
GAB1
SLC39A13
RABEP1
LPCAT3
CCDC88A
STX4
ZRSR2
MEIS2
OTUD7B
SLC2A14
TTC30B
PTEN
KLLN
METTL11B
IL6
FLRT2
JMJD1C
NR1H3
ACP2
RNF139
FOXP1
KIAA0232
KCNN3
ZC3H6
PELO
ITGA1
RCOR3
MYLK3
KBTBD2
RRM2B
NFAT5
MTF2
PPP6R1
PDF
SMARCD3
FCHSD2
UNKL
RAD23A
CTNNB1
PANK2
FDXACB1
C11orf1
ZNF148
DSTYK
MED23
PXK
UBE2E1
FABP3
DCP1A
SIL1
KDM1A
KLHL24
VANGL2
WTIP
RAD54L2
PHF3
ZNHIT1
PLOD3
ELF2
TWF1
LAMB3
PMEPA1
SERPINE1
COL7A1
MTRNR2L8
NODAL
SPACA6
CCDC92
FSTL3
TRIB1
SMAD7
TTC39B
MTIF2
OLFM2
BRD7
KCTD11
PPP1R13L
POLR1G
ABLIM1
MTRNR2L9
MYADM
PAX6
STAM2
FMN1
LEFTY1
CST6
CCDC33
RASGRP3
CTCF
PSMD2
UAP1
PEDS1-UBE2V1
PEDS1
CAV1
FGF8
EP400
BMPR2
SNX18
DHRS3
COQ8B
TAGLN2
MRPL2
KLC4
ALDH18A1
DISP1
CLCF1
TNRC6B
STOX2
TRIOBP
WBP1L
ACOX3
LRRC2
RRM1
NPFFR2
IVNS1ABP
CHRNA9
INPP4B
TMCO2
SERTAD4
PLK3
WDR36
H2BC11
H2AC11
MTHFD1L
LAMC2
KLF10
DGAT2
ELAPOR2
ILKAP
SLC35F2
CER1
CXCR5
ZFR
AHCYL1
GATAD1
FAM118A
PSKH1
H2BC21
H2AC20
VWA5B2
ZNRF3
ITPRIP
SERPINB8
NOL4L
LUC7L2
CSF2RB
KLRD1
S100A2
SPON2
BRIX1
SLC9A1
RNF223
LAPTM5
MAP2K3
PGK1
TFPI
IL17B
DDAH1
HSD17B8
UPK3BL2
UBE2B
CDKL3
SLC1A4
PRMT5
ZZZ3
EPSTI1
ARHGAP24
GPR183
WWC2
LOX
GADD45G
AMPD3
ZBED2
PIM1
KRT80
DENND2B
CPNE2
VOPP1
SLC46A3
USPL1
HMGB1
NOTCH3
CXADR
FOXJ3
ACSS3
JCAD
BLOC1S2
ZNF655
VDAC2
KCNF1
LEMD3
CD8A
KRTAP21-3
HNRNPA2B1
GAS2L1
CBX3
LRP12
HSP90AB1
UPK3BL1
TSPAN12
LRRC37A3
AQP3
MYOM1
NUF2
SOWAHC
SEPTIN10
MLLT11
CDC42SE1
IFRD2
SGK1
MRI1
BAMBI
HERPUD2
H4C12
LOC100287896
LIPT2
BEGAIN
PCK2
RET
AFF1
PURA
VDAC1
PLEC
PITPNM3
FEM1C
CCN1
KANSL1L
H4C11
EIF4E
DRAP1
C11orf68
POLD4
DST
SHKBP1
MINPP1
GEMIN7
CTNNA1
SLC20A1
SNX14
SLC25A45
NEDD4L
KANK1
AGBL2
TTLL8
CCNI
KPNA7
DOCK9
ALOX5AP
TBC1D5
TIPARP
HRH1
ZBTB5
PRC1
FLNC
RCAN3
AGXT2
SH2D7
ENOX1
PPP2R2A
SLCO5A1
MIXL1
SEC24B
GNL2
RHOB
RNF213
TTC9
PAFAH1B1
F13A1
UBE2D2
SLC44A1
FAM168B
CHST11
ZNF853
DNAJB14
BHLHE40
TP53TG5
ZSWIM4
PARL
GSK3B
ARHGAP28
DENR
USP53
PRDX1
P2RY2
NR2C2
CAMSAP2
ZNF697
RHOBTB2
NIBAN2
CAPS2
TEAD4
NPAS4
LARS2
TRPC1
BUD13
MTHFD2
NOCT
ANGPT2
DNAJA1
BPTF
APTX
TTF1
MAST2
HNRNPD
ADGRF2
GNAL
SSBP2
NINJ1
ZSWIM7
TTC19
MROH6
USP22
RAI1
GUCA2A
STAT5B
CDC37L1
ATAD2
RNF32
H1-2
GLUL
R3HDML
IL21R
USP47
TFF1
XPO1
LDLRAD4
CSF1R
CDHR3
MARCHF3
BMP8B
RUNX1
PAWR
TNPO1
SLC35E1
CLSPN
YOD1
QPCT
GRIK2
CCN2
SPRR1B
ACTBL2
USP42
ZNF354A
SEMA3E
FAM184A
CREB5
SYT14
CHN1
CALD1
MIPOL1
H3C15
H3C14
TMEM242
MCL1
MAP7
H4C14
TM2D1
RBMS1
MARCHF5
H4C3
CPEB3
PDE4DIP
KMT2E
FXR1
FERMT1
TMEM184A
MSANTD3
H4C15
CPA4
TTC6
MYLIP
MOB4
FOXA1
PSRC1
BAZ2B
USP30
SPTAN1
MAT2A
RIN1
SKP1
SH3BP4
FABP6
ZNF48
CYB561
TDGF1
SLC19A2
ADAM19
DNAJC28
BMP8A
ZNF641
PIK3R3
OCIAD2
SYN2
PALLD
COQ10B
ZNF587B
TNFSF4
RCBTB2
FAM53C
CDC25C
CLSTN1
TM6SF1
RXRG
PTGS2
ARIH2
GLRA3
ANKRD46
TMIE
ESM1
C2CD2
AMOTL2
ALS2CL
STK40
SETD5
IFRD1
FLVCR2
DNAJB2
RPL24
LRCH4
FBXO24
CYP3A5
ADGRG1
ACVR2A
PSMD10
LIMK2
ATG4A
UBN2
UBAC1
PTPRD
ACOT7
TRAK1
NSUN6
TCTEX1D4
NDUFAB1
CCNL1
KRT16
ID4
NOTCH2
HPCAL1
CCDC50
UBL4A
STK17A
RAPH1
LRRC59
KLF7
EML1
APOL3
SRSF7
PNMA1
FILIP1L
PCSK1
LAMA3
EIF2AK3
TLE2
HABP4
GATAD2B
THRB
PKHD1L1
SRSF3
ZSCAN22
PLPPR3
SMAP1
PRKRA
PJVK
BCL9L
ITGAV
HNRNPH1
DNAJC6
PMAIP1
NDST1
NASP
IL13RA1
ZCWPW1
PTPN18
MET
MEPCE
S100A13
GRM1
CHTOP
ARL4A
UBXN8
GPR180
E2F3
DDN
SMIM8
RELA
RAPGEF2
PCCA
LOC107986453
JUN
DDX59
CKM
ARID5B
ANKRD17
TBX22
SLC7A6
ARAP2
SYTL2
KIF27
BOD1L1
SREK1
SLC39A10
RUNX1T1
PDE2A
MAML3
DMPK
COPS7B
ATXN7L2
ARL15
FAM168A
ARF4
PCDHGC5
HTR5A
SERPINB6
ISCA1
FN1
DENND6A
TRDMT1
PPP1R14B
MDFI
KDM4A
HINT3
H4C5
ZC3H7B
SDHAF1
RANGAP1
NFIA
NEDD4
IMMT
TTI2
PAXBP1
H3C6
DLC1
C3orf52
SLITRK3
PFKFB3
NR1D1
IER5L
GPR68
ZFYVE16
LGR5
JDP2
RGPD8
RGPD6
RGPD5
IL17RD
EEF1A1
DMXL2
DET1
BAZ2A
XKR7
WDFY1
VIM
ADPGK
SNX30
SECISBP2
POLR3D
KHK
H2AZ1
H2AC19
H2AC18
ACSM4
TMEM183B
RAB23
NCOA3
DDX1
ZNF521
ZFAND5
SPAG9
HOXA2
ZFAND2B
USP15
LDHA
GSN
TRMT112
PRND
PRDX5
SLC34A2
SAR1B
HSPA1B
H2BC17
H2AC17
AASDH
S100A10
LARP1
KRTAP2-4
PCDHAC1
CYP19A1
ACTB
CYP2S1
SFT2D3
RRP8
MTDH
ILK
ENKUR
DEPP1
ASCC3
ZBTB37
KDM5B
FGF1
FBXL12
C4orf36
TGOLN2
SRF
LSM14A
CBWD6
CBWD5
CBWD3
UBL3
RPL5
MTRNR2L6
MARCHF4
FAM227B
DTWD1
CSRNP1
TLCD5
NYAP1
MMP24OS
MMP24-AS1-EDEM2
MECOM
KDM5C
ATP2A2
SMPD4
SMIM14
MZT2B
MRPL39
MED13L
IQSEC3
GGT7
APOBEC3D
AMOTL1
TRA2B
RPS20
POMZP3
PBX2
PABPC1
NRSN1
MFSD12
HECTD2
GTF2H2
RNF11
PPT1
IGF2BP3
FAM162A
CCDC58
TRA2A
TMEM222
REEP5
NDRG1
NAGK
MEX3B
MCOLN1
ACTL6A
TMC7
SRI
RSU1
PLEKHA8
MAK16
KPNA1
H2BC8
H2AC8
FRA10AC1
FKBP14
CENPC
XPO5
SESN2
POLH
NFYC
NCOA5
H2AX
SLC25A51
PPIA
GCNT1
UBR4
TRIP10
TMEM121B
SYNRG
SYNJ1
REST
RBP5
H1-4
C9orf40
UBE2D3
H3C2
YWHAQ
SYT12
RGS4
PPCDC
NABP1
MNAT1
HSPA5
BDH1
WDR1
TCEAL8
RNF6
MFAP3L
IER5
AVPR1B
ZNF225
PTPN14
IFT52
CORO6
APOBEC3F
TMEM215
LRCH1
E2F2
ZNF326
USP37
SULT2B1
SLC24A2
SFPQ
RNF44
NMRAL1
HMOX2
H2BC5
ERLEC1
CPNE4
CNOT9
CLDN4
ASB3
ACSL3
ZNF764
ZNF395
TBPL1
SLC16A1
MYO6
KLHL18
KIF9
H2BC12
H2AC12
ERI1
ZNF664-RFLNA
ZNF664
USP48
STX16
SLC4A2
SH3BGR
HDAC4
CDKN2AIPNL
CDK5
ZNF839
SPSB2
PRSS23
MICALCL
KIT
KCNMA1
EXOC2
DUSP1
CHST13
APOBEC3G
TMEM250
S100A1
PPIL3
PIGO
NIF3L1
CAP1
ACVR1
ZNF644
PTBP2
PPP1R10
POLE3
PDE1C
MRPS18B
FURIN
DCTN2
CEMIP2
CCNG1
C9orf43
AGO3
PPP1R21
HEXB
GTF2H2C
GTF2H2C_2
FOSL2
EXD1
ERBIN
DNAJC25-GNG10
DNAJC25
CNN3
CHP1
CERCAM
ARHGAP26
MDC1
H2BC15
H2AC15
EIF2B2
CCNH
ZDHHC23
TUFT1
TSC22D2
RTN4
RPS9
PPIH
GARS1
NTSR2
LOC728392
HTR1E
EIF4A2
CRBN
CPVL
ZCWPW2
UFL1
TRUB2
TAF8
MTHFR
METAP2
MEFV
HSPH1
ERMP1
DDIT4
COQ4
CLCN6
AZI2
ABCB11
MYC
SEC22A
RPS12
KIAA1841
ANKRD18A
ZSCAN31
PIEZO1
LOC388282
ITGB1
HDAC2
ANKRD1
UBE2S
TES
RWDD1
MRM3
MAP3K2
ID2
GLOD4
GADD45B
EFHD1
TMEM132A
KLF17
HMGA1
ANKFY1
VCP
SOCS2
SLIT2
POLR3E
ITPKC
GSTT2B
GSTT2
FAM3C
DESI2
DDT
CLDN6
AAR2
TMEM170A
SHF
SETD6
NCBP3
LAYN
FCHO2
CFAP161
CELSR3
B3GLCT
ATP23
ZNF821
ULK2
TP53INP1
TMEM18
PRMT9
IFNGR1
H2AC21
EIF4G1
DNAJB5
AK3
ZNF654
ZFHX3
VMAC
SVIL
PDS5B
OXTR
NDUFA11
LIF
FER
DNAJC10
CTF1
CGGBP1
C1QTNF7
TXNL4A
TUT7
SRSF6
KIFC3
FSCN1
ZDHHC22