ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
CCDC92
FGF8
CAV1
PRKAB2
CHD1L
SNX18
ZNF148
SKIL
COPS8
STOX2
ID1
LEFTY1
FBRS
MTRNR2L2
BMPR2
GAS2L1
SPACA6
NPFFR2
WDR74
MRI1
STAM2
KLF10
OLFM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPP2R2A
CHST11
ZNF853
ZSWIM4
NPAS4
LARS2
BUD13
NOCT
ZSWIM7
TTC19
LRP6
RNF32
NOTCH3
KAT6A
FOXJ3
LDLRAD4
LRRC37A3
MARCHF3
MLLT11
CDC42SE1
DRAP1
C11orf68
GRIK2
MTIF2
FAM184A
CALD1
MAP7
MARCHF5
CPEB3
CER1
NUF2
MTRNR2L8
EP400
NEDD4L
GAB1
JMJD1C
CYB561
CD8A
DCAF10
DST
RCBTB2
ABLIM1
MTHFD1L
USPL1
HMGB1
PTGS2
ANKRD46
CCDC88A
NSUN6
BAMBI
GNB2
PCK2
RET
NOTCH2
CCDC50
UAP1
RAPH1
LRRC59
EML1
WWC2
SNX14
PNMA1
TBC1D5
TEAD4
PLPPR3
SMAP1
GNL2
DNAJC6
PMAIP1
ZNF609
PTPN18
SLC20A1
GRM1
ARL4A
GPR180
E2F3
VANGL2
SMIM8
PCCA
TBX22
BOD1L1
MIPOL1
MAML3
COPS7B
ATXN7L2
FAM168A
HTR5A
AFF1
TRDMT1
HINT3
USP47
ZC3H7B
RANGAP1
NFIA
RCAN3
C3orf52
KANSL1L
RNF213
ZFYVE16
JDP2
DGAT2
RGPD8
RGPD6
RGPD5
BAZ2A
P2RY2
XKR7
WDFY1
KHK
SLCO5A1
RAB23
NCOA3
ZNF521
USP15
SAR1B
IKZF5
ACADSB
PCDHAC1
FEM1C
FDXACB1
C11orf1
RRP8
MTDH
ILK
ASCC3
LOC100287896
LIPT2
KDM5B
FBXL12
C4orf36
LEMD3
SRF
LSM14A
CBWD6
CBWD5
CBWD3
SOWAHC
SEPTIN10
PARL
MARCHF4
FAM227B
DTWD1
RNF103
TLCD5
MMP24OS
MMP24-AS1-EDEM2
SMPD4
MZT2B
MRPL39
IQSEC3
GGT7
AMOTL1
PDE4DIP
NRSN1
GTF2H2
GADD45G
TSPAN12
PXK
RNF11
PPT1
IGF2BP3
FAM162A
CCDC58
REEP5
MEX3B
MCOLN1
MTRNR2L9
FRA10AC1
XPO5
POLH
NCOA5
TTC39B
TNPO1
PRC1
TMEM121B
SYNJ1
REST
C9orf40
LRP12
MNAT1
SLC44A1
TCEAL8
RNF6
MFAP3L
AVPR1B
LPCAT3
IFT52
ZBTB45
TMEM215
LRCH1
E2F2
USP37
NMRAL1
HMOX2
ERLEC1
CPNE4
CNOT9
ASB3
ACSL3
CTNNB1
OCIAD2
ZNF395
TBPL1
MYO6
KLHL18
KIF9
ERI1
DCP1A
ZNF664-RFLNA
ZNF664
STX16
CDKN2AIPNL
ZNF341
ARHGAP28
ZNF839
SPSB2
EXOC2
CHST13
TMEM250
PIGO
PTBP2
POLE3
PDE1C
CEMIP2
C9orf43
AGO3
HEXB
GTF2H2C
GTF2H2C_2
FOSL2
EXD1
ERBIN
CHP1
CERCAM
ARHGAP26
GLRA3
MDC1
EIF2B2
CCNH
ZDHHC23
RTN4
PPIH
GARS1
USP42
NTSR2
LOC728392
HTR1E
CRBN
CPVL
LAMC2
ZCWPW2
METAP2
ERMP1
DDIT4
AZI2
WBP1L
MOB4
SEC22A
KIAA1841
ANKRD18A
ITGB1
HDAC2
FABP6
RWDD1
MRM3
GLOD4
GADD45B
EFHD1
CAMSAP2
TMEM132A
KLF17
BPTF
SOCS2
POLR3E
DESI2
CLDN6
AAR2
TMEM170A
SHF
NCBP3
LAYN
FCHO2
CFAP161
B3GLCT
ATP23
BRIX1
USP53
ZNF354A
ULK2
PRMT9
IFNGR1
EIF4G1
AK3
MRPL2
KLC4
ZNF654
ZFHX3
OXTR
DNAJC10
CGGBP1
TXNL4A
TUT7
KIFC3
LIMK2
UCHL1
RFESD
MEIG1
CCDC107
TTC9
SEC62
SDHA
OPRM1
MANEA
GGH
FNBP1L
ELMO1
CCDC127
C12orf42
VPS28
TEFM
PRKAA1
NDRG2
HMGN2
HBEGF
DHRS13
BTC
ARHGEF40
AKAP12
KBTBD2
CAPS2
FXR1
STMN1
RPGR
NXPE3
NIT2
MTARC2
GNAS
EPCAM
ARL6IP1
MED23
HABP4
XYLB
SLC24A1
GTF3C3
GABRG3
ZNF165
OSBP2
MDFIC
MAP2K1
HECTD1
C12orf73
ANKK1
SLC9A1
PIK3R3
SMIM10L1
SLC35E2B
PRH1-TAS2R14
PRH1
PDE8A
MKX
MAPK15
SLC39A6
RUBCN
FYTTD1
FAM177A1
ELP2
UBE2B
CDKL3
HSP90AB1
CCNI
UBE2D2
PRDX1
CLTC
ZNF48
ZNF641
CCNL1
PRUNE2
PET117
KAT14
DMRTA1
CDC42EP3
TBL1XR1
PABPC5
LIG4
KATNA1
GNAI2
ABHD13
HERPUD2
XRRA1
UCHL5
SPCS2
RO60
PROSER1
PDE8B
NUDCD3
NHLRC3
EYA3
CPLX2
GATAD2B
PLK3
USP22
ATAD2
TMEM242
PHTF1
NANOG
CCPG1
C15orf65
GNAL
TOR2A
STX18
SPAST
RIPK4
RBM15B
PLEKHM3
PHIP
MRPL38
FYN
AKAP9
ITGAV
THAP4
TEKT3
PARK7
KLHL23
KCNH5
ATG4B
IL20
FILIP1L
SPEF2
RUSC2
NAALAD2
IQCH
HEXIM2
FGFBP3
DNAJC19
CHIC2
ATP5MPL
ANKRD50
AMT
AAGAB
DHRS3
ZNF860
TRIM9
TPD52
SPOP
OSBPL10
NLE1
MTMR6
FAM151B
EEF1AKMT4-ECE2
EEF1AKMT4
DEGS1
CYP2U1
CCDC71L
C15orf40
BICD1
ALG3
TSPAN14
SIK2
L1TD1
FAM98B
C8orf37
MTF2
STK10
RMDN2
NDUFS3
KBTBD4
FAM120B
PURA
TAF12
RNF224
NAT8L
MAP3K4
KTN1
FAM107A
ELK4
EBAG9
CALB1
TIPARP
CDC37L1
SYN2
TGFA
NFKBIA
METTL9
MBOAT2
INKA1
FAM221A
BLMH
AFF4
CALM2
TMEM37
PAK1
HNRNPR
HCN1
ARIH1
AMPH
PRMT5
SNAPC5
SKA3
PLCH1
NRSN2
MRPL57
MCM7
LRRC37B
KCNQ3
HTR7
CRYBG1
AP4M1
AFG3L2
AMOTL2
THOC2
SST
MYO1D
MND1
MKRN2
FUT8
FAM222B
DSTYK
MSRB2
GAREM1
ANKRD12
TRIAP1
RTKN2
PLCL2
KCNH1
CTSL
RBPJ
ZC3H6
WNT5A
DNAJC3
ASAP3
AP3B1
ADAMTS3
RAD54L2
TMX3
SLC30A5
PLAAT1
PHACTR2
METTL2B
INTS12
HIPK1
HECTD3
GSTCD
FOXN3
CYP2R1
CCDC102B
AMFR
TMEM263
SSBP2
SYDE2
PKN2
GEMIN4
GAD2
SLC35E1
BAZ2B
TMEM267
TJP3
SERPING1
POT1
GNG3
DCP1B
CNTNAP3
CEP78
BSCL2
TGIF1
STK32C
SLC35G1
RPTOR
LRRC27
FUT1
BAZ1A
ANKRD18B
CALM1
STEAP3
NAA40
MEF2A
ARL5A
YAF2
UAP1L1
TATDN1
SUMF2
SMAD3
NDUFB9
NCKAP1
EXD2
CDKN2A
ADAMTS18
MAT2A
FERMT2
CNTN4
CARNMT1
ADRA1B
HNRNPD
PAWR
TTLL7
TRMT6
TEX10
TCF12
RIMBP2
PTPN4
MCM8
HES6
SYT14
ACOT7
TTLL9
SLC35A3
RAB11FIP3
FRMPD1
CABIN1
YPEL3
RNF166
MAPKBP1
DTD2
CTU2
AIFM3
VDAC2
IFRD2
CCN2
NR1H3
ACP2
TSKU
SEMA6A
LYRM1
DCUN1D3
CCDC43
C17orf75
POLD4
VPS18
SMPDL3A
MRPL40
MAP4K5
HIRA
FBXO22
CREBL2
AXIN2
ATL1
ARID2
THRB
SNTG2
SEC11A
NSUN7
MYO1B
DHRS4L2
CCKBR
AS3MT
HECTD2
SPRYD7
LONP2
IKZF3
ABCC11
HNRNPA2B1
CBX3
STK17A
VGLL3
SLX1B
SLX1A
GPHN
DYRK3
CHST15
CACHD1
BOLA2B
BOLA2
ACOXL
XKR4
TCF4
SLC44A2
SEPSECS
RBIS
MPHOSPH8
C8orf88
BARD1
ATG7
ELF2
TTC14
SPAG1
KCTD18
COMMD8
ARHGEF1
ZBTB2
TTC23L
RBM47
PSMF1
NUP153
LOC101928764
CCNL2
LOC107986453
YARS1
TAP1
SSH2
S100PBP
PSMB9
PRLHR
PIK3C2B
PCID2
KATNIP
GTF3C1
EFCAB5
CUL4A
ATAD1
RBMS1
UBN2
URB2
TRAPPC11
TAF5L
SUPV3L1
SUCO
RWDD4
EIF3A
TM2D1
ZNF846
ZNF280C
UQCRC1
TTC37
SRSF5
RWDD2A
RNF144B
PGM3
NOL11
HERC6
GALNT3
ARSK
SDE2
RANBP2
GCLM
FZD1
ATR
LDHA
USP3
TIMP4
SNRPN
RCOR2
RB1
FEZ2
ASAH1
USP30
TMEM60
STXBP5L
PIGH
PHTF2
MKS1
IL17RA
FGD4
MIXL1
NEIL2
GOLGA8A
FSIP2
FAM83B
DENND4B
CORO2A
UBE2Z
SNX19
SIDT2
HBS1L
FGF9
SLC25A51
PATZ1
ELAVL2
CAMK1D
APCDD1
ZSCAN22
RBP1
PCMTD1
CHMP4A
RSPO2
SUGCT
PDCD6IP
MPLKIP
EREG
CNTNAP5
CD24
TLCD4-RWDD3
TLCD4
SOCS5
PSMD14
OXR1
FAM174B
OTUD7B
U2AF1L5
U2AF1
STK32A
RRM1
ZC3H8
SPATC1L
GPT2
SYNPO2
RNF7
LNPEP
ZNF594
GPR160
TMEM222
RTN3
FBN2
WDHD1
SOCS4
KDF1
MYL12B
PTBP3
CYREN
ICE2
CCN1
SEMA3C
ARL14EP
CRH
SIRT1
SERPINE1
SNX16
TUBG1
RETREG3
COL7A1
DLX3
FSTL3
TRIB1
SMAD7
TNFRSF12A
CMTM6
THEM4
ME3
PRRG2
NOSIP
PPP1R12B
ICAM2
TOGARAM1
KLHL28
BRD7
INSYN2A
KCTD11
PPP1R13L
POLR1G
RICTOR
MYADM
PAX6
FAM172A
NFKBIL1
ATP6V1G2
FMN1
CST6
CCDC33
RASGRP3
SMARCD3
MMP10
CENPA
CTCF
PSMD2
PEDS1-UBE2V1
PEDS1
PELO
ITGA1
SNX25
EPB41
KDSR
KCNN3
FLRT2
ZNF571
ZNF540
LAMB3
COQ8B
TAGLN2
DERL3
ALDH18A1
DISP1
CLCF1
TNRC6B
TECR
DNAJB1
TRIOBP
ACOX3
LRRC2
TMTC4
IVNS1ABP
CHRNA9
INPP4B
SARAF
TMCO2
SLC25A25
NAIF1
BRAP
ACAD10
NFIC
SERTAD4
WDR36
H2BC11
H2AC11
SIAH1
BET1
ELAPOR2
ILKAP
SLC35F2
CXCR5
ZFR
SLC39A13
AHCYL1
GATAD1
ZNF592
FAM118A
PSKH1
H2BC21
H2AC20
VWA5B2
ZNRF3
ITPRIP
SERPINB8
NOL4L
LUC7L2
DNAJB4
KMT2A
CSF2RB
PANK2
KLRD1
S100A2
MFNG
METTL11B
SPON2
MACIR
CNOT1
SP4
RNF223
CDKN2AIP
CPT2
AXL
LAPTM5
MAP2K3
PGK1
TFPI
IL17B
DDAH1
HSD17B8
UPK3BL2
SLC1A4
LENG8
ZZZ3
TBC1D7-LOC100130357
TBC1D7
EPSTI1
ASB8
ARHGAP24
GPR183
LOX
AMPD3
ZBED2
PIM1
KRT80
FCHSD2
DENND2B
CPNE2
VOPP1
SLC46A3
CXADR
ACSS3
JCAD
BLOC1S2
ZNF655
KCNF1
KRTAP21-3
PRRT2
SLC2A14
UQCRB
GTF2B
UPK3BL1
IL6
AQP3
MYOM1
OVCA2
NTMT1
SGK1
REV3L
H4C12
BEGAIN
VDAC1
PLEC
PITPNM3
H4C11
EIF4E
SHKBP1