ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2A
HEXA
LAMP1
AP5Z1
KCNMA1
TNC
NEURL2
CTSA
WASHC2C
STRA6
ARID5B
CCDC200
GET4
SUMF1
KAT5
CLCN7
ZNF668
COMMD9
WBP1L
CLN3
C1QTNF1
RMND1
ARMT1
MSS51
RRAGC
PVALEF
AATK
TRMO
SEMA3D
MTHFR
CLCN6
MTRNR2L2
MYOG
FHL2
VPS33A
AMDHD2
ZNF507
NAGPA
MTRNR2L8
DOK7
SLC35A5
ATG3
HAGH
FAHD1
FSCN1
ETV4
PDE4DIP
C20orf141
SPNS1
SULF1
SYNPO2L
TBL1X
MEF2D
BAX
HNRNPH2
GLA
ATP6V0D1
CLIP1
CEP162
TBC1D1
IFNAR2
UBE2Q1
MXRA7
CDK4
HRCT1
TNNT1
CCN2
MYBPC2
TMEM167B
GPSM1
INO80C
FREM1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ACOT9
MCOLN1
ABLIM1
AFAP1
CDCA7L
NR4A1
CHD3
CNN3
BLOC1S1
CREB5
OPRD1
HHIPL2
ABHD2
HES1
DGLUCY
MFSD1
HOXC13
RYR1
SERTAD2
HNRNPD
EYA1
ATP13A5
LFNG
VPS11
HPS5
GTF2H1
ETS1
KDM1A
MINDY2
TRIM62
GUCA2A
FAM110A
AMOTL2
INTS12
GSTCD
SMYD1
TRIM55
ZNF609
POLR2M
CCNI
HERC5
TXLNB
SBK2
SCN3B
SMARCD2
CITED2
YBX3
TBC1D9
SPATC1L
KAZN
ATP6V1C1
MAST4
OSGEP
APEX1
DUSP5
ZAR1L
BRCA2
GRN
KDM3A
WASHC5
NSMCE2
HMX3
TBC1D19
COMMD4
BLCAP
ZBTB18
MNAT1
PPP1R3D
FAM217B
TNNT2
INTS10
KCNF1
DUSP6
NCAM1
RIN2
ITGB3BP
EFCAB7
SLC4A2
CDK5
ATP6V1H
CXXC5
KDSR
S100A2
ZNF32
MRPL44
CUTA
TCEAL7
DYSF
ARID5A
LACTBL1
ARID1A
SSX2IP
ATP6V1G1
TCF4
SNRPB2
PIP4P1
FAM240C
MSMO1
SUPT7L
SLC4A1AP
LTBP1
CAPS2
KANSL3
FUT10
MYL4
SSTR5
USPL1
HMGB1
MAPRE2
C2orf49
CFLAR
VASH2
KLHL12
TXNIP
GFRA1
LIMCH1
MTF2
PEX3
ADAT2
RGS3
RBM28
MARCHF8
RAD9A
GTF2B
PROSER1
NHLRC3
INMT
KANSL1
EPHA3
PSMD3
MYLK2
SSBP1
NAV2
MAPK10
STYXL2
MTRNR2L9
WDR74
RPUSD4
FAM118B
VPS50
HEPACAM2
NDUFA4
METTL7B
SELENOH
SLC25A34
PELO
ITGA1
ICE2
PTPRD
CCNG2
ELOVL6
COLEC12
SH2D3C
ZNF292
EFNA1
MRPS23
OSBPL7
ANKRD12
TBC1D30
GNS
SUGCT
MPLKIP
CHMP2B
MUSTN1
TPP1
ILF3
SHB
RNASEK
HMGCS1
DES
RBPJ
CALM2
IRF2BPL
TACR3
SMAD3
MTRF1L
HES6
PPP6R1
FOSB
MC2R
INKA2
DDX20
ECH1
ALLC
MDM2
E2F6
PAFAH2
NAGLU
TBPL1
NAA38
RCBTB1
PMEPA1
PLEKHD1
SH3BP4
ZBTB40
STMN1
MYLK4
CRBN
IRF9
SNX16
THOC1
IPP
ACHE
BHLHE40
NOXO1
CDC42EP3
AZIN1
TSR3
GNPTG
C5orf51
AMPD3
PTK6
SYTL3
SSBP2
ARHGAP24
CGGBP1
C3orf38
COMMD2
UTP18
RBSN
MBTD1
SRSF7
ATP8A1
ARFGEF2
RASGRP3
MAMSTR
WWOX
CDK5RAP1
G6PC3
PKM
AASDH
ZNF217
UVRAG
BCAT1
FZD1
VGLL3
NUP107
HIF3A
CTHRC1
METTL9
ANKRD1
OTUD7B
COPS4
TOR1AIP1
PELATON
SREBF1
RPS7
VTA1
NMBR
NOTCH2
SLC24A1
TRIL
STING1
DVL2
SH2B1
SHPK
CTNS
CHRNA1
MAP3K7CL
PSIP1
GTF2A1
NFE2L2
MTFR2
TTC9
KDM4C
LZTS2
APP
GRAMD4
ARSG
USP15
SAV1
YARS1
S100PBP
SYT7
RPL27
TTC26
NACA
SYNRG
RTN2
RBMXL1
KYAT3
HSPB7
MADD
PUM3
RARB
TSPAN33
TRIM72
ELAC2
NDUFV2
NRAS
SPATA9
RHOBTB3
KYAT1
NBPF1
DYRK1B
FSD2
SLF2
DUSP10
ST7
USP30
MTBP
MRPL13
ANKRD40
NUF2
TNFRSF19
RAB5B
IMPACT
TMEM100
NEBL
NEXN
IL21R
CPA1
TNNC2
CCDC107
AAAS
ARL14EP
WDR11
COX16
PFDN4
MRPS31
ZBTB26
RAMP1
THAP10
LRRC49
RPS12
PRR5-ARHGAP8
PRR5
GSPT1
LRRC17
TM9SF4
ZNF654
ZNF572
MRPL34
DRG2
DNAJC25-GNG10
DNAJC25
DEPTOR
KAT6A
MYL12A
ACVR1
RTTN
CCDC88A
KDM8
POMZP3
ATP2A1
RARA
IKBKG
ATP6V0B
NKIRAS1
NR1D2
NME1
TARS2
KIAA0895
BRF2
ANLN
JMJD1C
MTERF1
WBP4
STAT3
GOSR2
ELF1
ZNF335
RGMB
PRKAG2
MYO18A
ASB18
MSL2
CAV3
HRC
NFIB
GPRC5A
ZCCHC4
KLF7
MAST2
TMEM242
SNRPB
STX16
HDAC9
SYTL2
RHOJ
MCM6
GBA
PBK
ARMC8
TEFM
AIFM1
CDK6
KLHL32
SLC33A1
NDUFAF4
PLEKHM3
TOP3A
SMCR8
TSFM
FAM185A
ATR
VPS13B
SETD3
INO80B
CCNK
NAPA
CBWD5
CBWD3
MMADHC
RPL5
CBWD6
WDR75
FLOT1
CDON
SH2D7
PLSCR1
DCLRE1B
AP4B1
TNFRSF12A
RPN2
RBL1
MROH8
MTHFD2L
SF3A3
PALLD
CASZ1
ZSCAN30
ZCCHC3
TERF1
TBL1XR1
PIKFYVE
AXL
THAP5
DNAJB9
MPHOSPH10
MCEE
RUSC2
PSMB7
MEMO1
PNKD
MTMR14
PCNX4
EPM2A
POLDIP3
BET1
ARHGEF6
PTK2
LAMTOR1
CLK1
NPEPL1
VMP1
PTRH2
PDZRN3
DMAP1
DDX1
COMMD8
PRDX6
PLAAT5
POLR1F
NSUN4
KCTD9
H2AZ1
COL12A1
CDCA2
LRRC58
ELAPOR2
RFC1
SEMA6A
LEFTY1
IRAK1BP1
ATF3
SULF2
SLC25A32
DCAF13
USP37
THRAP3
NLK
MFAP4
FOS
CNOT9
CBLL1
ARL8B
HELB
MTREX
DHX29
RBM39
KLHDC10
AIG1
CRNKL1
CFAP61
EIF2B3
WDR36
LRTM1
GTF2H2C_2
GTF2H2C
SGIP1
TRIB3
SLC1A4
RBM24
OBSL1
INHA
BDKRB2
ACSL3
PLS1
SDHD
RCAN1
OSBPL9
HBS1L
FITM1
USP47
MRPS5
MFAP3L
ID1
HSPBAP1
EML2
CXCL3
CALD1
LRIG3
FAM200B
ZC3H15
XKR7
TRIM32
BMPER
ASTN2
APBA1
TMBIM4
PCOTH
MIPEP
SERPINI1
PDCD10
SLC30A6
SECISBP2L
IARS1
HOMER3
DDX18
CSTF1
AURKA
NKAP
GBE1
TTI1
STX18
RPRD1B
KRTAP4-1
KIAA1522
DHX35
CTBP2
SVIL
HIBCH
RPS6
METTL3
MEGF10
GRPEL2
DCTN1
C12orf66
RAB18
TGFBR2
RPL11
NPAS4
CSRP1
SLC25A26
DENND2A
ARNT
ZMIZ1
SLC51B
PALB2
FAM200A
DCTN5
PGM1
DPH5
UBE2B
UBC
SS18
PHACTR2
PDSS2
PDCD11
DOCK7
CDKL3
ATP5MD
SDHAF3
MAPKAPK3
CCDC174
TPM2
YTHDC1
RXYLT1
PIGL
MRPS15
ECHDC1
CYP2U1
CISH
CACNA2D4
ZCCHC24
IMPDH1
TAMM41
PSME3
NYNRIN
MED28
ITGB1
FAM186A
CCSER1
UBE2D3
FLRT3
STK36
RNF25
DAB2
CCNC
CLDN12
ZSWIM7
WASHC4
TTC19
STRIP2
NT5C3A
HMGCR
GRWD1
CHRNG
OXNAD1
DPH3
VPS45
TAOK3
STX5
ERGIC2
N4BP2L2
PPCDC
KRT80
RUNX1T1
SLC26A11
NUDT9
UBXN4
RNF6
MCL1
TRDMT1
RTCA
PTDSS1
PMAIP1
PIGC
MTERF3
AAR2
NFIA
SLC38A2
ERMARD
CNOT2
HIPK1
TUBE1
RBMS1
FAM229B
ZSCAN9
ZMAT1
SEPTIN9
MMAA
LOC100996750
KRTAP4-7
HECA
EIF2S2
ATF6
AMOTL1
PRKAB2
CHD1L
ZNF780B
PLS3
PGM5
CLUAP1
PXDNL
NDUFB5
NANP
MRPL47
POLR3F
DZANK1
PNISR
STAC3
POGLUT3
CAP2
C21orf91
SRI
ETAA1
CACYBP
MYL12B
ZNF397
RTN4
ZCWPW2
AZI2
GNG11
ACTR3
PAXBP1
PRR29
AHI1
POLE4
PIH1D2
NKAPD1
NUP42
THAP9
SEC31A
ZNF790
ZNF407
ZNF155
TRAM1
SIKE1
SETBP1
PYURF
PIGY
NFATC2
NDUFS7
IGFBP5
HERC3
CLASP1
SPRYD7
SASS6
PELI2
BRD4
C10orf88
ATP5F1E
SETDB1
SP2
STX17
SP9
PEF1
AURKAIP1
ATF7-NPFF
ATF7
FGGY
HBP1
VIPAS39
VCPIP1
TOMM34
STK17B
SLC36A1
RIOK3
RECK
NXPE3
C8orf44-SGK3
ANGEL1
AHSA1
DENND2B
B3GALT5
DTNA
TIMM10
RAD18
PTPN21
PIPOX
NUB1
NFXL1
MTX2
ADGRL1
SKIL
MED18
CCDC146
GCLM
ZSWIM3
ZBED5
UTP25
TPRA1
STT3A
POLR1B
NUFIP2
MRPS18C
HELQ
DUSP3
CNOT4
C8orf37
ANKRD53
ACOT8
KRTAP5-3
TP53RK
RFC3
ZNHIT6
TNK2
SUCLG1
SHISA2
SH3BP2
RPL9
MORC2
LIAS
H2AZ2
DR1
DCTN6
CDC25B
ARHGAP29
TYW3
CRYZ
DARS1
RCHY1
CCDC138
UQCRB
TMEM106B
TAGLN3
TACO1
SCFD1
OSBP
KCNH8
HUS1
FBXO10
BRAF
ANKRD65
ACOT11
CCDC171
CEP120
UFM1
TRMT6
MCM8
ZBTB38
SS18L2
SEC22C
IST1
IMMP1L
GPR39
EMC2
ELP4
CWF19L2
CTNNB1
CCDC102B
CAMK2D
BLOC1S5
BCAP29
ALG10B
ROCK2
CAND1
SLC35A1
ERLIN1
ZNF484
SQLE
SNX5
SF3B6
SF3B5
RBBP8
NUDT4B
NUDT4
MGME1
MEGF9
FAM228B
DNAJB2
CSNK1G3
SOCS2
RPL31
MYCBP2
POMP
TPK1
TBCK
SLC9A1
SLC25A36
SDCBP
KLHL40
AIMP1
THAP1
ARHGEF12
NUCKS1
CDC7
PEX2
ADGRL2
FRS2
RPL37
VPS25
SELENOI
RHOBTB1
POT1
NCSTN
LYPD6
ICAM2
ETV1
COPA
CFL2
BZW1
ADNP
ADGRF3
PSMA1
ARHGAP28
ANO6
ODF2L
THUMPD3
CPED1
TOM1
SKAP2
RPL23
POLR3D
NAA16
MTRF1
MPG
MED13
FUCA2
CEP41
UBB
C17orf75
STARD3NL
TMEM64
YAP1
TTC21B
RPF1
PHTF1
MRPS10
MDM4
MAN1A2
EIF2D
CLTC
CD63
C12orf73
BIRC2
SLC44A1
ING3
RPL21
SCAND1
ZSWIM4
ZMYM5
SRP19
RAB30
IDNK
CMSS1
ALK
NUDCD3
TNPO3
SGO1
RPL15
ZNF684
EHBP1
POLR3B
U2SURP
TUT1
TOP1
SPHK2
RPL18
REXO4
PSMD5
MTR
FOXO3B
FNTB
FBXO48
EEF1AKMT1
CHCHD3
APLF
ANKRD46
AFTPH
YTHDF2
MRPL53
SHPRH