ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708085 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX4708037: Hep G2

◣ SRX4708085: K-562

◢ RBM39: STRING

WDR74
MTRNR2L2
MSH3
DHFR
POLDIP3
CCDC200
MAMDC2
PMF1-BGLAP
PMF1
MTRNR2L8
UNC45B
H4C2
H3C2
H2AC4
H4C15
H4C14
H1-2
FRG2C
TOP3B
NPAS4
ADARB1
H4C11
MBLAC1
SIRT4
MTRNR2L1
DMAP1
PRAME
USP30
CCNI
TMEM107
H4C3
H1-6
H2BC8
H2AC8
PTPN6
C12orf57
SRSF3
CCDC125
MUC3A
SRSF7
KLHL22
MTRNR2L9
KMT2E
H2BC12
H2AC12
FRG2
GBA
TMEM167B
TMEM242
ZBTB4
SLC35G6
POLR2A
PAXBP1
EEF1A1
INTS12
GSTCD
H2BC11
H2AC11
CRKL
SNX16
COL23A1
EXOC2
TMC4
MKRN3
PRDX1
H4C12
H4C5
CALM2
SF3A3
PAFAH2
PPP6R3
POLR3E
RGPD2
RGPD1
PUM1
EIF2B3
PBLD
HNRNPH3
ZKSCAN8
DUX4
EFHB
GTF2IRD2
GTF2IRD2B
NGB
ZC3H10
RPL41
LIN28A
RPS12
MRPS15
RPL5
H3C12
H2BC17
H2AC17
TUBA1C
HSPA1B
WDR36
LACTB
RPS27
RAB13
RRP15
SACM1L
SLC25A51
CTNNB1
HSP90AB1
NASP
TNPO3
RBBP5
SREK1IP1
CWC27
TTC26
H3C15
H3C14
H2AC19
H2AC18
KLHDC10
NCOA7
SUGCT
MPLKIP
TRIM48
SNRPB2
PRMT5
INTS6
BMS1
TOR1AIP2
TOR1AIP1
SLC9A1
RBSN
SSBP1
COX16
NUF2
KDM8
MAT2A
RPL15
NKIRAS1
METAP1D
UBE2D3
BCR
KANSL3
FER1L5
NDUFS7
TRAF7
PCBP3
TATDN3
NSL1
LUC7L2
RAP1GAP
PHF19
DSTYK
BRF2
LTA4H
TTI2
TUBA1B
FAM133B
RPL12
LRSAM1
NXF1
RPL32
FUS
INO80C
NFKBIL1
DDX39B
ATP6V1G2
MTF2
EGR1
STX10
IER2
P4HA1
POLR2J3
FAM98B
KNL1
COMP
H2BC5
H1-4
GDF15
VILL
STAT3
GINS3
EIF4B
BNIP1
SEC22B
CETP
MTIF2
KMT2D
BRMS1
B4GAT1
NME1
OR2T1
H2BC21
H2AC21
H2AC20
RPS3
PPP1R10
MRPS18B
PLEKHM3
ZNF391
UBE2L3
HTR5A
H3C4
H2BC7
H2AC7
RFXANK
BORCS8-MEF2B
BORCS8
ZC3HC1
CYCS
ZSCAN30
H2BS1
HSPA6
LTF
L1CAM
YARS1
S100PBP
ACBD6
TACO1
EIF4A2
MRPL44
ZKSCAN4
AAR2
GTF2A1
TBC1D19
ITPR1
TRUB2
COQ4
SLITRK3
RPS26
RTBDN
MED23
RBM28
CRB1
PPP6R1
RTL10
GNB1L
CCAR2
C8orf58
BCAR3
RXFP3
NBPF1
FIBCD1
VPS52
RPS18
B3GALT4
ATXN7L2
EIF4G2
XKR7
SPDYC
HMGA1
SSBP2
SHF
ZBTB37
RPLP0
H2AZ1
DNAJB14
DCTN6
SFPQ
FMC1-LUC7L2
FMC1
IGLL5
JPT1
METTL25
CCDC59
TSC1
GFI1B
MRPL21
IGHMBP2
TMEM259
CNN2
SRSF2
MFSD11
TUBB4B
CSDE1
ST3GAL4
RPS20
NUP214
SPATC1L
TRIP4
DCAF10
ZNF385A
SLC24A1
PSMD5
HSPA1L
HSPA1A
PPP2CB
DCLRE1B
AP4B1
ASH1L
H2AC16
H1-5
H3C11
SDF2L1
ILF2
GSTA4
RPS7
VPS72
PPIL2
SNRNP35
TIMM17A
IER5
SLC30A6
RPL7A
MED22
RPS24
POLR3A
E2F6
ZNFX1
DCT
BRD2
FRA10AC1
UTP3
ZNF280A
ZDHHC8
HTR3D
IPO4
RIF1
YDJC
CCDC116
GPN3
FAM216A
PSMB3
PCGF2
H4C8
RBMX
ANGPTL4
THOC1
C8orf37
PLXDC1
RPL24
H2BC4
H2AC6
YTHDF2
EIF1AD
BANF1
MAPK1
BBS1
EPB41
NABP1
MTERF1
TMEM101
SNAI1
POU2F1
COMT
EPS15
CPPED1
PARK7
EIF1
DDX18
RCOR3
AQR
NSUN4
SLC34A1
DRG2
RPL11
MRPS23
POLR3B
TPR
ODR4
MGRN1
RAF1
RPL23A
RAB34
IMMP2L
ZNF253
FUT7
C9orf139
ABCA2
TMEM238
RPL28
C11orf49
PLCD3
ACBD4
AIFM3
GTF2H2
RPSA
RPS15A
CCNC
STX6
ERMARD
ARID1A
PNP
AMBRA1
STXBP3
CLTC
CKS2
ZBTB20
C19orf12
NEK2
RPL19
CACNB1
BTG1
MYC
CNOT3
TRA2B
TNFRSF21
TAF1D
C11orf54
TMEM267
NECAP2
POP7
STX16
PSMD3
GLUL
NFE2L2
ZMPSTE24
LRIF1
BRK1
KANSL2
H3C10
H2BC13
H2AC13
RPL37
POLG
FOXJ3
ZNF747
SCCPDH
DARS2
CENPL
RPL10
TRIM7
PIGC
HNRNPA2B1
CBX3
MRPL39
SRSF1
NPDC1
SLC39A3
H3C13
H2BC18
CSKMT
C11orf98
AARS2
PPIH
MST1
R3HCC1
EIF2D
RSPH6A
PTPRF
ATF4
H2BC15
H2AC15
FOS
FAN1
MECOM
APOM
BAG6
SELENOH
ERVH48-1
GABBR1
STX18
ITGB3BP
EFCAB7
CCDC115
NDUFS3
KBTBD4
OLA1
KIF15
KIAA1143
ING3
FANCD2
SMIM5
MRPL40
HIRA
RAB11A
LINGO1
RBM17
ARL15
FBXO28
RPL34
LRGUK
LRRC37A3
WBP1
INO80B
H4C4
JUNB
MRPS18C
HELQ
NACA
PVRIG
TMEM209
SSMEM1
KNTC1
ST3GAL3
SLFN12L
CYP4F11
MRPS33
UCKL1
TSFM
SNRPE
RNPEP
MED18
C17orf75
GTF2H4
INTS7
DTL
UBQLN3
OR51B5
NUP205
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAN2C1
TEFM
VAMP4
AGBL3
THADA
FBXO8
CEP44
CEBPE
HINT3
SAR1B
CCDC90B
TMEM181
H4C9
MRPL1
NBEAL2
CCDC12
PMPCB
VPS25
ATP5F1B
ELAVL3
ARAP1
RNF6
RTN4
HEXIM1
ADPRHL1
RPL38
NUFIP2
MLH1
EPM2AIP1
OBSL1
INHA
GALK2
COPS2
BCL3
RPS23
ATP6AP1L
SMG7
REXO4
ADAMTS13
SLC12A5
ZFP64
TMEM222
TMA16
SNRPF
SUPT7L
SLC4A1AP
PALB2
DCTN5
C12orf73
LZTR1
TJP3
ZCWPW1
MEPCE
OPRL1
LKAAEAR1
KDM5A
CCDC77
SCGB1C2
SCGB1C1
RPL23
ZNF92
NDUFA9
AKAP3
DDR1
DDX1
TSPOAP1
ST7
ZWILCH
RPL4
GIMAP8
ZCCHC4
PRADC1
CCT7
FTL
SEPTIN5
POLR2K
GP1BB
FBXO43
EBI3
CALB1
PEX3
ADAT2
H2BC14
H2AC14
ACTB
SPAG11B
MRPL48
RAET1G
U2AF2
NOP10
NUTM1
NDUFC2-KCTD14
NDUFC2
RPL27
TFAM
BPGM
MTBP
MRPL13
MRPL42
PDE11A
RBM45
KDM3A
VPS13B
FZD1
TMEM168
GMEB2
ZEB2
KPNB1
CHEK1
SON
GART
MAP3K7CL
CCT8
SLC6A9
MRPS31
GDAP1
C10orf88
SF3B3
COG4
VARS2
PLIN3
ERAL1
PPIA
ZC3H15
POLR3D
TAOK1
MTMR9
KLHL20
TTC4
SECISBP2L
RPS8
USPL1
HMGB1
ZNF843
PRR3
GNL1
CNOT4
YBX1
TMCO1
METTL1
EEF1AKMT3
CYP27B1
YJU2
SMARCC2
GOLGA3
ZNHIT3
PRRG2
NOSIP
IFNAR1
NUDT5
CDC123
SIGLEC10
CCDC88A
ZSCAN12
ALKBH3
RPL31
C2CD5
MED15
GPANK1
C6orf47
PSMC3
CCT2
EEF1AKNMT
CSNK2B
GYPA
ARL6IP1
ACYP2
METTL8
DCAF17
PCBP2
NPM1
CHMP7
BAIAP2
SLC17A7
COX19
SPDL1
C14orf93
NFYC
TEX9
RFX7
DDX21
NUP107
ZNF703
ZNF429
PDLIM2
HNRNPAB
TIPARP
LARS2
MOB1B
NEU3
GNA13
INTS5
FFAR1
CCL1
CBWD5
CBWD3
MARCHF7
CBWD6
SNRPB
SYT7
PRDM7
SPOCD1
REV3L
IFRD1
CENPW
DPP9
SWSAP1
CACYBP
METTL26
MCRIP2
H1-3
DUSP1
RAD54L
DDX3X
ZNF184
TCF12
GOLM2
ZNF668
ZNF646
CRCP
ZCCHC10
HDAC2
MEAF6
GNAI2
RPS2
RNF151
ATR
IARS1
ZNF518A
HNRNPA1
CBX5
SMCO1
H3-3B
GTF2B
RPL22L1
RBM48
PEX1
MRPS36
MDGA1
SMIM12
BRWD1
PUS10
PEX13
ATAD2
PCNT
C21orf58
MTHFD2
MRPL16
ERCC6L2
RPS10-NUDT3
RPS10
RPL9
LIAS
SND1
MRPL30
MITD1
ZNF408
ARHGAP1
ADNP
SSR3
DYNC2I1
MTF1
TXNRD2
CSAD
KEAP1
SCG3
THAP9
SEC31A
NR1H3
ACP2
FUT10
CCNG2
THAP7
ABT1
SLC33A1
RPL6
JUND
PLEKHG5
LRP2
CEP85L
POU2F3
P2RX6
AJUBA
CITED2
PRMT3
AHCY
BRIP1
SMG9
H4C1
H3C1
H1-1
RAB3GAP1
RABGGTB
MTMR2
TFRC
VTA1
NMBR
SNRPD1
HMGB2
PSMA1
ZNF165
CCDC71L
BSDC1
OSCAR
NDUFA3
ZNF718
ZNF595
TANK
LAMTOR5
GPR89A
VWA7
TCP11L1
PPM1F
ELAVL1
GMNN
TTC30B
LSM5
AVL9
RPL36AL
MGAT2
RPL36A-HNRNPH2
RPL36A
BTK
SEMA6B
FAM53C
CDC25C
ZSCAN31
NET1
ZNF25
PPIP5K2
NDUFS4
SLC27A4
PCLAF
RBM39
NBN
REXO5
ERI2
SGF29
RREB1
DPY30
PIH1D2
NKAPD1
CTNND1
EEF2K
INTS2
RPS9
NAT10
DHX9
RPL7L1
PKIB
SERINC1
TYW3
CRYZ
ZNF56
HBG2
HBG1
ZNF76
XRCC4
TMEM167A
FAM149B1
ECD
PSMA5
CYRIB
CCDC88B
UBC
GTF2H2C
GTF2H2C_2
RPL10A
SLC35B1
SLC36A1
TOMM5
ISOC2
SLC29A3
SRRT
SNX30
MUC1
NAMPT
CCNL1
FER
ZNF574
RINT1
ARL4A
PTCD2
MRPS27
BRAF
TRIM41
DHPS
PDZK1IP1
CARD8
AIFM1
WTAP
SOD2
DR1
BECN1
EXD1
CHP1
EEF1AKMT1
DTX4
ZNF670
STOM
MZF1
PHLDB1
BIRC6
SDHAF3
KRIT1
ANKIB1
MBTPS2
ARL1
MIA3
GADD45B
MSH4
DIO1
RPLP1
C6orf62
PSMD14
STMN3
RTEL1
U2SURP
CHD2
SLC1A5
PPM1D
EIF3F
HEY1
ADGRL1
DHH
ZCCHC7
RGL2
AP1G1
FBXO4
HMGN4
PPP1CC
JMJD1C
POLB
PDE4C
NOL12
TMEM191C
KLK2
GABPB2
HSPA5
DIDO1
TMBIM4
GID8
ZBED8
PPIL4
ECHDC1
TRAPPC3
EGFLAM
E2F3
FOSL1
ZSCAN21
GFM2
ZNF839
TOMM6
SERBP1
ZNF189
MRPL50
NOL8
CENPP
TMEM87A
GANC
SPG11
UBB
ARMCX5-GPRASP2
ARMCX5
H2AX
PABPC1
SEC14L1
GTPBP10
HNRNPC
TANGO6
CENPC
ZBTB45
RPL22
CENPN
TSSC4
DUOXA2
DUOXA1
DUOX2
DPY19L4
TMEM41A
SIRT5
KIAA0895L
EXOC3L1
ATP5MF-PTCD1
ATP5MF
ARL2
KCNA7
MYL12A
PARP2
CETN3
ZBTB7B
FSCN1
SNAPC5
DDX19B
AARS1
THUMPD3
ACTRT3
NCDN
KIAA0319L
GPBP1
MYO1F
PIGBOS1