ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX768290: HT-29

◣ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MAMDC2
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
KIF5C
PTPN6
C12orf57
ATN1
METTL25
CCDC59
PTPRN2
CCT2
ARL4D
ART1
MAN2C1
H3C15
H3C14
H2AC19
H2AC18
H4C14
SNX33
IMP3
S100A1
S100A13
CHTOP
MTRNR2L9
NDUFS7
SLC3A2
H4C15
SRCAP
LOC730183
LRP6
WDR74
STX5
PRMT2
CZIB
TMEM248
TMEM223
TMEM179B
OIP5
NUSAP1
TTLL4
TBRG4
POLR3B
MTRNR2L10
DUX4
LARP1
NFYC
ATF7-NPFF
ATF7
SPAAR
HRCT1
RTTN
STEAP2
FOLR1
CLK1
ZSCAN22
SF3A1
CCDC157
SRSF7
PURA
RAC3
DCXR
USPL1
HMGB1
LOXHD1
TMED1
MBD4
IFT122
EIF4B
HSPBP1
BRSK1
AMACR
PDCD2L
NBPF1
CAAP1
EHMT1
ARRDC1
EMILIN2
SPOP
TMBIM6
DCP1B
ZSCAN25
SUPT7L
SLC4A1AP
STAMBPL1
TP53I3
SF3B6
FAM228B
UTP23
PDCD6IP
RPL5
H2AX
DPAGT1
HMBS
VPS37A
CNOT7
CAPRIN2
MYO1G
DNAJB12
SMIM15
PISD
EIF2D
POLD1
NR1H2
NDUFB3
FAM126B
LMTK2
RSL24D1
SPTLC1
UBE3B
KCTD10
SNX8
SHANK3
NAGK
SMIM10L1
PRH1-TAS2R14
PRH1
ST3GAL3
WASHC4
TFDP1
CBWD5
RARG
SEMA4B
TTC14
COL23A1
FAM227B
DTWD1
TRIP4
PCLAF
VAMP4
DOK3
DDX41
TYW1
SBDS
DENND4A
TOLLIP
CYP51A1
RBM28
USP21
UFC1
C12orf66
GPN2
PGBD2
NDUFS3
KBTBD4
FAM180B
MOGS
CCDC142
MRPL53
PNP
PIP4P1
RAD51
EIF3CL
EIF3C
POLR2J3
DSTYK
TNPO3
KTI12
DYNC2I1
METTL1
EEF1AKMT3
CYP27B1
ESYT2
TMED3
GNL2
XRCC6
KIAA1958
DESI1
C9orf147
MTIF2
TAF10
RRP8
ILK
TPP1
FBXO22
STRAP
MPHOSPH10
MCEE
EIF3E
L3HYPDH
JKAMP
BAZ1B
ZNF408
ARHGAP1
POLG
ZNF687
DIABLO
PDE4A
AASDH
HMGCR
STAT6
MRPL44
GMNN
THNSL1
THG1L
MTPN
LUZP6
MRPL1
SLC52A3
LEO1
MRPL45
AKR1A1
VAMP1
CBWD3
GRPEL2
PPM1D
PAFAH1B2
TRIM59
AKAP9
TOR1AIP2
TOR1AIP1
P2RY2
XPR1
TMEM88
NAA38
CYB5D1
CUL5
REX1BD
LUC7L2
WDR6
COL6A2
GOT2
SMDT1
PHETA2
NAGA
XPOT
LOC102724770
DGCR6
NBN
KLHL12
ZWILCH
SNAPC5
RPL4
BORCS6
CRYM
OGDH
STYXL1
MDH2
MAP3K5
SF3A3
TTC4
MRPS17
AAAS
PRC1
PRCP
DDIAS
HACD2
SSBP1
MFAP3
FAM114A2
KLHL22
SAR1B
HUS1
NOP16
HIGD2A
C6orf226
PPFIA3
LIN7B
C19orf73
COX7C
PRR22
DUS3L
TCAF1
TLDC2
ANO10
ABHD5
CYCS
TSFM
MRPL48
RPS13
SEPTIN2
HDLBP
TNRC18
LOC100129484
FNTB
PPP3CA
KMT2E
LARP4
FAM186A
MZF1
BORCS7
MUC3A
SUGCT
MPLKIP
MGAT1
OSGIN1
MCCC1
ACYP2
H4C5
H3C4
H2BC7
H2AC7
H4C4
H2BC5
H1-4
MRPS36
PIK3R3
KANSL1
LSM5
AVL9
GPD1
COX14
FUT11
CHCHD1
SLC12A9
MEST
STXBP3
TARBP2
NPFF
MAP3K12
MTRNR2L6
NUP107
KRT8
PFDN5
MYG1
PSME3
BECN1
KRT18
TXN2
TEKT2
ADPRS
TSSC4
EIF3J
SWSAP1
EPOR
FIGNL1
HEXA
ATP5MC2
SCAMP1
PPIL3
NIF3L1
EDEM2
MMADHC
LYSMD3
KCTD17
GTPBP3
FBXL13
ARMC10
ANO8
ZNF394
ZKSCAN5
GOLPH3
HPS5
GTF2H1
NDUFB2
ASNS
ZMYND15
PPIL2
MED11
CXCL16
UROS
BCCIP
ATG9B
ABCB8
SLC24A1
MRPL3
ADAM15
FRMD3
CEP83
YEATS4
RAB27B
CDK5RAP1
CCDC97
NACA
C19orf33
SLC37A3
RAB19
SEH1L
DCPS
PPIP5K2
AHCYL2
PMPCB
YARS2
BLOC1S2
NOP53
DMAP1
PTPA
CRAT
MRPL42
GNG14
DHPS
CCT5
ATPSCKMT
YIPF3
POLR1C
LRRC73
C12orf65
TCTEX1D4
PLK3
BTBD19
ANO6
ZNF391
MLF2
WDR97
MAF1
CYC1
PLEKHM3
PSMD9
HPD
SNRPE
MALSU1
VPS52
RPS18
B3GALT4
TPM3
MRPL35
IMMT
TSEN54
LLGL2
CASKIN2
NHLRC1
WDR4
UNC13B
DPY19L4
SECISBP2
CKS2
LTA4H
YTHDC1
METTL7B
CNOT2
CDC42EP1
RFC4
LGALS2
TRIM48
MRPS31
ZNF165
OR1F12
STOML2
PIGO
SIGMAR1
GALT
ZBTB45
SLC27A5
TDG
C12orf73
KCNIP2
CCDC43
AGK
TARS3
RNF111
IL11RA
LRATD2
ITGB3BP
EFCAB7
TIPARP
SLC35E3
H4C9
H2BC12
H2AC12
HAGH
FAHD1
SLC25A28
MYLIP
COX18
PAIP2
MCRS1
CHST12
RAB5B
PMEL
CDK2
DDX46
ELAC2
POLR2J
RPS6
RPS27L
SRGAP1
CHAC2
BNIP2
ZNF789
ATP5MF-PTCD1
ATP5MF
CLUH
INTS2
ZNF212
MRM3
GLOD4
TATDN3
NSL1
ABHD11
NRL
DCAF11
DCAF10
GARS1
ZMPSTE24
MBTPS2
TMCO2
SLC25A21
CASC3
SNX17
EIF2B4
SND1
BCDIN3D
TMEM87A
GANC
FAM71E1
EMC10
SLC25A13
TTC26
TMBIM4
PDE7A
PRLR
DDX21
SIRT6
CEP70
ANKRD24
CALU
TBC1D19
BLOC1S6
RGS11
HNRNPU
GPR35
TMCO6
NDUFA2
IK
CD14
FGFR4
ASCC3
ORC4
MBD5
HNRNPA1
CBX5
SLC11A2
GHITM
DRD4
RAPGEF6
TAF5
GABPB1
DLG4
ACADVL
PEX3
ADAT2
CCNB2
GPN3
FAM216A
CCNC
CFAP298-TCP10L
CFAP298
TMEM251
RBM6
MOAP1
KBTBD8
PCID2
CUL4A
TMEM168
B9D1
PDIA3
FAM120B
RPS26
UBE2K
SMPD1
BBS9
YY1AP1
DAP3
SMARCAL1
NDUFAF2
ERCC8
TRAF6
RAG1
AQP6
AQP5
TBK1
EID1
MBD1
CXXC1
WDR70
NUP155
COMMD1
CCT4
TRUB2
COQ4
POLR2J2
SEC11A
H2BC6
FIS1
ZNF561
CLDN15
NUP214
MRPS35
GET4
LPCAT4
USP30
BMF
TSSK4
MDP1
CHMP4A
TPRA1
THOC3
RNF14
ZCWPW2
UQCRHL
NPM1
FAM168A
AZI2
ATF2
VIPR1
NXT1
ARHGEF19
WDHD1
SOCS4
SLC25A6
CHMP7
RPS5
MRPS18C
HELQ
PSMC4
PRKRIP1
ATG5
TRAPPC4
RPS25
PDE4DIP
ARIH1
FAM185A
SLC10A7
RAD51AP1
C12orf4
NARF
CYBC1
SLMAP
PAAF1
COA4
FAM133B
SRSF2
MFSD11
LRRC57
HAUS2
RINT1
PUS7
INTS7
DTL
CHCHD3
TMEM238
TMEM190
RPL28
ZNF250
TFB1M
NAT10
NME1
CBWD6
TOMM22
GLCE
ZNF770
TRMO
FANCA
NUDT1
MRM2
MAD1L1
WDR61
TBC1D14
SYCP2
PPP1R3D
FAM217B
MTHFS
USP8
OCIAD1
EIF4A3
SLF1
KIAA0825
ICE2
CMTR2
RPP25
PRPF8
PIGF
HECTD1
CRIPT
TFPT
PRPF31
ERAP1
DUS2
DPEP2NB
DDX28
TMEM209
SSMEM1
GOLGA3
POP7
STT3B
INO80
ZBTB3
POLR2G
TSPAN31
CDK4
AGAP2
FANCD2
ADIPOR2
PCNP
H4C8
TAF6L
RTF1
MARCHF9
TRIM36
HCFC2
GLT8D2
DNAJC19
BRF2
KAT7
SCAND1
CCDC77
PARP2
PPA2
CETN3
NUDT15
PARL
ATG4C
YWHAE
KDM5A
LIPH
GSTM4
MTERF4
SDHAF3
CRADD
DCP2
OTULIN
EIF2S1
ATP6V1D
NDUFB7
ZCWPW1
PPP1R35
MEPCE
RFC5
RASA1
PLEKHF2
TRUB1
TNS2
TMED5
TAF13
SLC25A17
RPRD1A
NUTM2E
NOP2
KLHL18
KIF9
CCDC18
BPHL
ANKRD13D
CNPY3
TMEM230
PCNA
CDS2
NUP42
ZDHHC17
PTPN23
PKD1L1
NAPRT
MROH6
DCTPP1
CFAP43
PSMD8
GFM1
IPP
ADSL
GTPBP10
FKBP9
SCFD1
H2BC4
H2AC6
TMED4
DDX56
NAV1
MAP4K5
HAUS1
CTSL
CLSTN1
ATP5F1A
ATL1
PPWD1
CENPK
PGAP2
COA1
MYO19
GGNBP2
SLC12A6
NUTM1
NOP10
RGL2
PFDN6
PIGW
RPS3
FGD4
SCAMP2
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
RASSF6
SUMF2
KBTBD3
EFHD1
AASDHPPT
AK2
STX18
SMIM4
NT5DC2
RPS15A
KIAA1217
CSDE1
TFRC
TRIM56
PUS7L
IRAK4
DTD2
CCNT1
PDIA4
PEX12
AP2B1
RPL6
PTPN11
THAP9
SEC31A
SCYL3
CENPS-CORT
CENPS
PLPBP
PWP1
PLD6
NR4A2
NAA35
CAP1
KNL1
ZNF786
NOL7
CLDN4
ZBTB49
LYAR
ZFC3H1
THAP2
TEDC2
TBC1D9B
KITLG
FBXW7
ADPGK
C1QTNF5
ZNF672
TMEM167B
FOXJ3
USP2
NOP14
GRK4
SDHD
THBS4
MTX3
MVK
SPATA5L1
GATM
MFRP
METTL8
DCAF17
BRMS1L
ASH1L
SMG8
TMEM267
EPS8
PA2G4
TBC1D2
SERINC4
SERF2
PPP2R5C
LPAR5
HYPK
HSD17B4
EXOSC10
ESR2
DYNC2I2
SRSF11
PNPLA8
TRIP6
SRRT
RAB11A
UNC50
COA5
ZBTB6
RC3H2
MACROD1
PSMD7
TMEM116
TMEM106B
SLC1A3
ERP29
CDK19
C6orf136
AMD1
PRR19
PAFAH1B3
MRPL24
CBWD1
ZNF740
CSAD
RIF1
YWHAG
PCLO
ILF3
EXO1
THAP5
DNAJB9
PLPP5
L2HGDH
EPRS1
DMAC2L
SMIM41
ATG101
IVD
COX5A
CSE1L
POLR2M
TRIM3
TIMM10B
MAPKBP1
STYK1
POLB
MIF
BCKDHB
TMEM260
TET3
MAP2K1
TARS1
OGG1
PPP1R10
MRPS18B
ATAT1
CYSTM1
SGK2
RPP21
SPRED1
NOL12
JMY
ANAPC10
ABCE1
PMVK
RMI1
HNRNPK
OARD1
NFYA
ZC3H10
RPL41
ESYT1
AGL
METTL2B
UTP20
DECR1
C15orf61
GLIS2
TIMM13
SETD4
RPL39L
PPP2CA
METTL2A
CBR1
MRPL16
ETNK1
C2CD2L
USP48
ZFYVE19
DNAJC17
CTH
CEP135
C11orf65
P4HA1
PBLD
HNRNPH3
LCMT2
ADAL
MBD6
DDIT3
VWA7
SYNCRIP
MARS1
GTF3C4
DDX31
CALCOCO2
BCAT2
ARHGAP9
ARHGAP18
APC
OTUD7B
LEMD3
LAG3
HEMK1
C3orf18
MAPK1IP1L
POLE3
C9orf43
ALAD
PRMT3
RHBDD1
PRMT9
GPT2
SEC24A
CHEK1
MATN1
MRPS30
MOCS2
FXYD5
ASCC1
ANAPC16
RNF13
BNIP1
ATR
LFNG