ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140208 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◣ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
MTRNR2L9
FRMPD4
HDAC9
MAMDC2
MTRNR2L10
EMILIN2
PCM1
ZBTB38
SLC25A20
FNDC3A
SSBP1
PPP5D1
CALM3
TOP2A
EPS15
ARID5B
IARS2
BPNT1
MTRNR2L1
CCL3
SYT7
RPAIN
NUP88
INO80C
CSDE1
HNRNPUL1
BRWD1
GLIPR1L1
CAPS2
TRAPPC9
PTEN
KLLN
INTS10
SPATC1L
UBE2J1
SF3A3
MYOM2
PMF1-BGLAP
PMF1
ARHGAP17
TJP3
SIX1
PHF19
PNKP
ARHGEF2
ENPP4
CLIC5
KLHL29
TOMM40L
DENND1B
APOA2
KLF2
PROSER3
HSPB6
ATP2C1
KLF6
FUT10
TARS2
CCDC90B
RAB11B
MRPS18C
HELQ
RAP2B
C1orf198
NGB
GCLC
LNPEP
MDM2
SCT
CDHR5
ACTL6A
WDR74
RUFY3
H4C4
TRIP4
CXCR5
CCL5
CCDC39
ATP6V1G1
PSPN
ALKBH7
TMEM256
NLGN2
MDM4
SMCO1
ZPBP2
IKZF3
NCOA7
MNT
ILF2
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
NAT16
HCAR3
CHST12
KATNB1
ANP32C
KMT2C
EML2
DPP9
POLG
FGG
CRYAA
CRYAA2
XAB2
RGS8
PCP2
DUX4
SKA2
PRR11
KANSL3
FER1L5
TJP1
NDUFS7
UBE2H
DRAP1
C11orf68
LOC102723996
ICOSLG
COMMD2
USP3
MUC3A
CCM2
MRPS23
HSD11B1
CDYL
CDC20
USP30
PSMD4
MED23
LIME1
SMARCD2
WHAMM
FSD2
AURKAIP1
TRIM48
FMO4
TP63
BBX
FOXK1
FAAP24
CEP89
LEFTY2
CMSS1
TEPSIN
NDUFAF8
HOOK1
AQR
LSG1
RAD51AP2
C2orf42
RBBP5
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
INSR
H4C15
H4C14
GBA
SATB1
KDSR
CSNK1G3
CCR2
H4C3
H1-6
CRB1
TACO1
SPTLC3
KIF16B
TIMM22
LRRC14B
PRPF18
INTS1
TMEM109
SLC33A1
PRPF19
NR1H2
CCDC77
PWWP2A
STAP2
MPND
DPEP3
DHX8
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
POLR3F
DZANK1
ARHGEF1
STOML2
MFAP3L
ERVMER34-1
EPYC
COPZ1
CCL3L3
CCL3L1
ZNF451
TYK2
RBM28
SCNM1
LYSMD1
ZNF609
TLR5
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
MYCBP2
EPRS1
NDUFS3
KBTBD4
DHX16
CLEC7A
NPIPB5
CHD6
RHOT2
PNISR
GORAB
BIN2
KHSRP
ZSWIM1
UNC93B1
RPL35A
RAB40B
PPP6R1
IQCG
HAX1
ECT2
CRYBB1
COMMD1
CCT4
NUF2
SLC9A1
OXCT2
MAPKAPK2
KLHL20
PLCD3
DMAP1
ARNTL
ACBD4
TDRKH
LTA4H
SMARCA4
IFIT1
TMEM107
MGP
NLK
SSR3
TSC1
PSAP
MTFR2
GFI1B
TOMM40
MACIR
TUT1
SCAMP4
MYNN
EMX1
CLPTM1L
ADAT3
ACTRT3
FRG2
UTP3
ZNF668
ZNF646
SH3GL1
P2RY10
OCSTAMP
DAPK3
CHAF1A
EVI5L
BAHCC1
NSMCE3
FAM207A
CSTB
TFB2M
CYP2R1
CNST
CCDC61
KIF22
ITGB1BP1
CPSF3
ZBTB5
FRG2C
YJU2
ZNF718
ZNF595
ZMPSTE24
STBD1
PGP
LCOR
FAM184A
BRICD5
FLAD1
EIF2AK3
TTC21A
RAB11A
LOC101927572
GTF2H2C
GTF2H2C_2
GORASP1
FBXO38
ALKBH6
METTL26
WIPF1
UBE2I
RSF1
POLR2J3
MCRIP2
AAMDC
TMEM218
STK17B
LYZL2
GGCT
PRR14
UTS2R
TRNAU1AP
SRI
KCNN3
KAT7
DNAJC14
CCDC167
PRRG2
NOSIP
TAS2R38
NAA35
GSR
ATP5MC2
OSBPL2
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
ZBTB32
TNFRSF17
NPIPB2
NBEAL2
KCNH1
DDX1
CCNC
RFX1
SMARCE1
ISOC2
GOLPH3L
FMO1
RPS27
RAB13
NUCKS1
IDH2
HSD17B4
SF3B6
FAM228B
PCDH1
NCBP2AS2
NCBP2
MORC3
HARBI1
DCP1A
ATG13
CCNL1
TLDC2
TAF3
BABAM1
AP2M1
PAFAH2
H4C12
UBE2T
INTS4
GATD3B
GATD3A
CHD9
AK2
ZNF519
TRAPPC6A
RPL27
PPP1R37
MRPS17
MKNK2
GABPB2
EMID1
BLOC1S3
ALG10B
AHCY
PRICKLE4
LRRC45
FRS3
FBXO11
CENPX
ARL1
TLR4
TAB1
RSPH6A
NR1D1
MLLT1
GTF2H2
FLT3LG
PSMD5
FAM72D
FAM72C
TATDN3
NSL1
KRR1
TSACC
THADA
STIL
CCT3
SLC25A25
RABEP1
PXMP4
FBXO40
EIF4A2
PARP8
LY9
GOT1
DNM2
SLC39A3
RBSN
P4HB
NOTCH2
NOL6
TIPRL
SOD1
SLC9C1
PLEKHA8
PDE12
KNL1
UNC45B
TPD52L2
SETD1A
ABHD16B
UCHL5
RPL26
RO60
PRDM10
GPR89A
SP2
TRIP10
GPR108
FBXO8
CEP44
AFF3
PMVK
KAT6A
ZSWIM4
WWOX
TRMT2A
TRAF3IP3
SMG6
RER1
RANBP1
RALGPS2
PRMT5
PIK3C2A
MORN1
BARHL1
SSBP2
STK17A
LARP4
HHLA2
FAM186A
RUVBL1
KLHDC10
RPL37
TBC1D10B
MYLPF
SLC35B1
REEP6
PCSK4
EPS8
DNAJC24
DCDC1
CASP8AP2
BTN3A2
ATF7IP
TSSC4
NAV1
LARS1
RFX5
MAP1LC3B2
BUB1
RIC1
PHF1
OPA3
HUS1
LOC645177
CD69
C12orf77
PSMD3
OAT
NOTCH1
CCAR2
C8orf58
WDR24
STPG3
NELFB
CEACAM21
ATP5MC1
TRUB2
LAX1
ETV5
COQ4
CDK5RAP3
ATG5
ACTR2
TMEM259
RPL15
NKIRAS1
MRPL1
CNN2
UFC1
TIGIT
DNAJC19
KDM4D
CWC15
ZNF286A
MTOR
ZNF443
RUBCN
PM20D1
NPIPB6
TMCO1
RGS1
NIP7
COG8
SNX16
ADAMTSL1
CABCOCO1
TNFRSF19
COL23A1
CLPB
DDX23
BOD1
NAV3
SLC8A1
H4C11
VPS50
HEPACAM2
UNK
H3-3B
TMEM115
CHMP4B
CCDC200
CDCA3
TCEA2
DDX49
COPE
IFRD2
RWDD1
SP1
EHF
TBL1X
PHF12
FBXL19
H2BC4
H2AC6
THRAP3
FEM1A
MAPKAPK5
AP2S1
H4C2
H3C2
WDPCP
MDH1
TSN
FAP
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
GALM
CIC
TSNAXIP1
RANBP10
ST3GAL2
PRCC
PHB
SUCLG1
RPS20
MRPL24
BANP
NEBL
ID3
ARID2
PEX14
DFFA
FAM168A
SMPD3
TSC2
NTHL1
RAG2
IFTAP
PPRC1
OR4M1
LRRC29
CALR3
C19orf44
NUDCD1
TOM1L2
NCLN
DRC3
PAK1IP1
MMACHC
C6orf52
RAB5B
ZFYVE1
PPP1R12B
GSPT1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
OR4Q3
SPSB3
NUBP2
HNRNPC
LRCH4
GATB
FBXO24
INVS
ERP44
PES1
COMMD9
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
PEMT
RPS3
ZNF17
CCDC146
PIGL
NCOR1
COX16
ING4
ZNF417
PANK4
HES5
BMF
SPAAR
HRCT1
ID1
TMEM11
PIN4
SP5
SRSF11
LRRC40
PNKD
KHDC4
EMILIN1
C16orf91
AAMP
ZNF608
STIP1
NUP107
BUB1B
ZNF268
OSBP
MED27
GPR137
DDX41
GUF1
NOP16
HIGD2A
GSK3A
ZNF547
TRAPPC2B
TTI2
INTS9
HMBOX1
TULP2
NUCB1
DYNC1I2
MTRF1
TFPT
TBL1XR1
PRPF31
TMEM70
ELOC
ZFPL1
TMEM262
TMEM242
CNIH4
CDCA5
SNX17
SCAF1
RRAS
RCAN1
NOC4L
EIF2B4
DDX51
RPS7
RABL2A
EXOC3L1
E2F4
RANBP2
GTF2H4
ZNF211
ZNF687
SYMPK
RPL32
PNPLA6
FOXA3
CYCS
NUDT13
C19orf53
TM4SF18
SLC39A1
NEDD8-MDP1
NEDD8
GMPR2
CRTC2
ZCCHC4
ZNF165
UBQLN4
LAMTOR2
TBP
STAM
SSBP3
PSMB1
PHB2
TMTC3
CEP290
ZSWIM3
KBTBD6
FCF1
COX7C
AREL1
ACOT8
TIMM21
STK25
H4C5
H2BC7
FBXO15
EMC4
ABT1
NUP205
METTL3
ATG4C
TBL3
MRPL11
ZNF628
ZNF337
PSMB6
NDUFAF5
ESF1
DMAC1
CAND1
TNFRSF12A
THOC6
HCFC1R1
BUB3
ZNF225
ZCCHC8
WDR46
SMG8
SEC11C
PFDN6
MRPL30
MITD1
TCERG1
RPS6KB2
NR6A1
MICOS13
HSD11B1L
NFKBIL1
MRPL53
MRPL28
DDX39B
ATP6V1G2
OAZ3
ZC3H12A
SHPK
NDUFB5
MRPL47
CTNS
TOR1AIP2
TOR1AIP1
SPHK2
SMARCAL1
SLC35E2B
RPL18
PSENEN
NFIB
MEIS1
LIN37
KRT15
GTF3C3
GSTO2
FAM83E
ANAPC5
ZFYVE19
VWA5A
PSMD11
HEMK1
DNAJC17
C3orf18
ZNF383
NPRL2
CYB561D2
C12orf43
ATP5MG
ATP5F1B
ZSCAN22
UBAC1
RPL14
SIRT4
ZMAT2
VRK1
SUFU
GOSR2
ACTR1A
ZNF140
TRDMT1
PPP1R12C
CTU1
UFD1
PSMC5
FTSJ3
CDC45
VPS25
UBR2
POLDIP3
TMEM94
STT3A
SEL1L
CCDC174
SLX4IP
MKKS
PEX3
FARSB
CA11
AHCYL2
ADAT2
ZNF444
UFSP2
SIRT2
NFKBIB
CDK5RAP2
C4orf47
KCTD5
MRPS7
GGA3
VCPIP1
PTDSS2
C8orf44-SGK3
C1orf159
CRADD
TIMMDC1
FAM187A
EFTUD2
CCDC103
SEC13
NMT1
DCAKD
SUGP1
MAU2
HEXIM2
FASTKD1
TRAPPC3
TMEM60
PHTF2
HEXA
G3BP1
CLN3
APOBR
ZNF773
ZNF691
TLE3
KRT23
ZNF548
RARB
POM121
LMAN2
HEXB
MT2A
EXD2
CD2BP2
ZNF500
ZC3H10
UBC
TSNAX
RPL41
PDE6D
COPS7B
ZNF776
RPIA
NME1
COX7A2L
SMAD3
COPS7A
VEZT
FGD6
DLGAP1
RPL18A
C19orf67
ZNF420
ZNF143
SART3
ISCU
FBXW11
SUPT7L
SLC4A1AP
TRAF7
RBM25
EMCN
ZNF335
SNX15
SUPV3L1
ZNF226
SNX1
LTN1
CIAO2A
TXNRD1
PITX3
H4C8
GBF1
CACTIN
MRPL20
TMEM63C
EIF3F
SCRIB
NBPF15
EXOC4
RNF121
LOC100133315
DYNC2I2
CTDP1
ZNF688
PEX2
EXOSC6
ZNF235
TXNL4B
DHX38
SECISBP2
MRPL21
METTL25
IGHMBP2
CCDC59
ZBTB45
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NTMT1
NSUN2
C9orf50
RPGRIP1L
FTO
CCDC124
SULT2B1
EXOSC5
BCKDHA
CLDN2