ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1181993 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◣ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

KIF5C
RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L8
LOC102724770
DGCR6
MTRNR2L9
MTRNR2L1
PMF1-BGLAP
PMF1
COL23A1
BRPF1
PTPRN2
DUX4
SETD1A
ORAI3
MUC3A
PSMC3
NHLRC2
DCLRE1A
HARBI1
ATG13
TIMM22
ADAMTS9
CMSS1
TELO2
PTX4
SFSWAP
IL32
TRIM48
ARL1
FRG2
FRG2C
FBXO8
CEP44
SMARCE1
SNRNP35
ARMC8
RAD51AP1
C12orf4
MTRNR2L10
NUCKS1
TIMM9
KIAA0586
EMILIN2
ZNF195
WDR74
STX5
CEP295NL
PPP1R37
GARS1
LGR6
CCDC200
ZNF285
PDE12
ZFAT
MYO19
NPAS4
GGNBP2
THAP4
ATG4B
EXOSC8
ALG5
MBD1
CXXC1
H3Y2
TMEM139
CASP2
SNX16
NELFA
TCP11L1
EPN1
NUFIP2
GET4
RPL34
ART1
SNAPC1
ZNF101
ATP13A1
SH3BP5L
PRCC
SELENOT
UNC45B
NLE1
SLC35E2A
SLC35E2B
MYL12A
SETD2
FOS
CNOT4
KRT8
POR
CDCA7L
ZNF219
TMEM253
ARL4D
INO80D
IQCH
AAGAB
CMC2
CENPN
PAXIP1
PARK7
NOL8
CENPP
H4C12
ZC3H7B
RANGAP1
CNOT6
YY1AP1
DAP3
MED26
H4C11
HDAC2
SMIM41
ATG101
C21orf91
MARK2
POLG
TIGD5
EEF1D
PTDSS1
MTERF3
AKIRIN1
H2BC14
H2AC14
PIK3R3
TARDBP
RPN2
MROH8
DLST
SOD2
DNMT1
KCNAB2
UROS
BCCIP
EIF4A1
CD68
TCP11L2
PHRF1
MYO9B
HAUS8
FZR1
DOHH
MYL12B
FLCN
FRAT1
GIT2
ANKRD13A
ZMYND11
H2BC15
H2AC15
RHBDD3
EWSR1
SNAP29
PI4KA
FRAT2
WDR38
RPL35
ARPC5L
PSIP1
UIMC1
FBXO33
PRDX2
KDELR1
GRIN2D
NOCT
HYAL1
PRKDC
MCM4
SS18
TUSC2
PPIB
H3C4
ATF4
FAM53C
CDC25C
EED
LUC7L2
CENPE
PKNOX1
PPP1R10
MRPS18B
BCL6
ZWILCH
RPL4
H4C5
H2BC7
H2AC7
RNASEH2A
ATAT1
UBE2B
CDKL3
S100A13
S100A1
CHTOP
UFD1
CDC45
FBXW4
SRI
SELENOW
PRKCI
PCBP2
DPP9
HYAL2
EEF1A1
FMC1-LUC7L2
FMC1
FKBP3
FANCM
DGAT2
C6orf62
PFDN4
SNAPC5
HEXIM2
TRIP10
GPR108
ZNF639
CDON
PRMT1
TMEM260
FAM227A
CBY1
GMNN
UNK
H3-3B
H4C14
H3C15
H3C14
H2AC19
H2AC18
HSP90AB1
TRAPPC6B
RPS19
PNN
H1-2
USP15
H3C13
H2BC18
RPS3
TAF15
LRPPRC
CSNK1A1
SLC35B2
RNASEK
C17orf49
FUS
NEMF
SLTM
NDUFB1
CPSF2
MIA2
PTOV1
GNB2
EIF3B
UQCRQ
LEAP2
GDF9
GSTP1
CDIPT
RPL19
DSE
CACNB1
CSPP1
COPS5
CD164
RAB28
RPS29
TADA3
ARPC4-TTLL3
ARPC4
RPS20
RNF169
COMMD6
H2BC5
H1-4
EBF1
UQCRC2
PSMD3
PRDM10
STK35
IQCE
NDST2
ASAH1
UNCX
NOP56
TJP2
BAG2
PPP5D1
CALM3
H2BC21
H2AC21
H2AC20
TMSB10
RITA1
DDX54
SIGMAR1
GALT
WRAP53
TP53
RPS11
UFSP2
C4orf47
PPP1R13L
POLR1G
MAT2A
PMVK
CHMP3
AFF1
PRPF40A
ARL6IP6
RPL22
RNF207
DIPK2A
OXR1
ASH1L
PABPC4
H4C4
ATF7-NPFF
ATF7
WASF2
UCHL3
RPL11
CRKL
ZNF335
ALDH4A1
TACC1
HBD
HBB
FTH1
UBE2L3
CSNK2A1
TAF6
MBLAC1
CNPY4
OGA
C6orf226
UTP18
MBTD1
SIRT4
TSPAN4
POLR2L
CD151
CCDC22
CACNA1F
UBAP2L
C1orf43
MRPS24
SLC5A1
TBC1D17
PNKP
FTL
AKT1S1
MYL6B
MYL6
WASL
CDK16
OLFML2A
NR6A1
TRA2B
NDUFS5
H4C15
H4C2
H3C2
H2AC4
CD79A
BZW2
ANKMY2
KRT19
KRT15
H4C9
FAM110A
UPF1
JUNB
UBA1
ZC3H10
RPL41
SPSB2
RALY
UBALD1
GALNT10
H4C1
UQCRH
PDXDC1
LRRC41
AGRN
NAA10
ARHGAP4
DUT
GAPDH
HSPB1
TTPAL
RPLP1
PKIA
CELSR3
INTS2
GET3
PTCD2
MRPS27
TSPYL4
SMC3
KCMF1
ZNF300
NDFIP1
H4C3
H1-6
SERINC4
SERF2
HYPK
RPL13A
PGP
BRICD5
RPS16
TSKS
AP2A1
RPLP0
GCN1
SYVN1
ZBTB4
SLC35G6
POLR2A
FRMD6
RBBP6
ISG15
HEXIM1
LANCL2
DOT1L
GTF2A1
RNF103-CHMP3
RMND5A
HMGA1
H2BC6
C11orf94
TPBG
RCC1
RPL10
ATG16L2
H2BC11
H2AC11
KDM3B
NSD3
LETM2
LOC100996842
H2BC12
H2AC12
ID1
TUBA1B
ZFAND3
ZDHHC5
UBC
MORF4L1
SRXN1
RAB11B
PIP4K2B
ANP32E
CEBPB
EIF4A2
PTCD3
POLR1A
ZNHIT2
MRPL49
FAU
WTAP
NQO2
MIA3
ETV2
COX6B1
CCT5
ATPSCKMT
LYRM1
DNASE1L1
DCUN1D3
ZBTB8OS
RBBP4
SLC3A2
H2BC4
H2AC6
POLG2
DDX5
CEP95
RPS15A
SERBP1
PPP2R5B
ATG2A
H3C3
PRCP
DDIAS
RPS9
H3C6
TTF1
CFAP77
BMPR2
TM7SF2
MTMR14
CDKN2C
PRR3
GNL1
RBM39
HNRNPU
NIPBL
TBX3
OAZ1
PRMT2
LIN7B
PPIA
DAZAP2
CUL2
OOEP
NFYC
MAP3K20
RAVER1
ICAM3
H3-3A
TOP2B
HHIPL1
CCDC85C
TRAPPC3
SRSF3
MAP7D1
H2BS1
ZDHHC2
H4C6
H1-3
MRPS11
MRPL46
SMIM29
EIF4G2
SHC1
NUDT4B
NUDT4
UBE2S
ARAF
TRA2A
BZW1
DYNC2I1
NFKBIZ
INAVA
SPATA17
GPATCH2
MTCH1
COPZ1
H4-16
H2AJ
MGRN1
STRIP2
DUSP1
TNRC6B
HNRNPC
BRD2
STX10
IER2
SRSF1
PRR19
PAFAH1B3
RPL21
H4C7
H3C7
RAD23A
CALR
TST
MPST
LRCH4
FBXO24
ATP6V0C
AMDHD2
HDAC1
MCM5
H2BC8
H2AC8
GDI2
UBE2J1
BAZ2A
ATP5F1B
RPL39
LIN54
PPP2CA
HECTD1
CPEB2
MCL1
SEC23B
IFT52
TMEM129
TACC3
SLBP
SETD5
FAM160B1
WDR26
TUBB
TRAF7
RAB26
PABPC1
MDC1
KRT18
H4C13
H3C11
H2AC16
H1-5
MOCS3
DPM1
SREK1IP1
CWC27
HNRNPA3
SRCAP
LOC730183
H3C1
H1-1
LSM14A
NOTCH2NLC
XPO1
TPI1
NASP
HMGB2
SASH1
BTG1
PLXNA3
BCLAF1
PPFIA3
FKBP5
C19orf73
RPS27A
CLHC1
RPL12
LRSAM1
ACTB
LY6G6F-LY6G6D
LY6G6F
CASKIN1
ABHD16A
SMARCD2
PRKAG2
PYGO2
PBXIP1
LOC101928120
ZC3H6
PSMD14
PCNT
C21orf58
H3C10
H2BC13
H2AC13
NOTCH2NLB
NOTCH2NLA
EFCAB2
TMEM190
TMEM238
RPL28
ACTG1
FLNA
EMD
C19orf48
RPL13
NSMAF
RASSF7
LMNTD2
CNOT3
HSPA1B
TTLL7
SNRPD2
QPCTL
H2BC17
H2AC17
CSTB
HNRNPUL1
DNAJB12
RBBP9
TBL3
RPS2
RPL3L
RNF151
NDUFB10
UBE2A
CXorf56
MBNL1
HOXB2
SMARCAL1
PTP4A1
IER5
ZFP91
LPXN
TMEM131
PHF8
FOSL1
CCDC85B
PDIK1L
MAP2K4
TP53RK
SLC13A3
NR2F2
H4C8
MDM2
LMNA
ARID3C
CSDE1
SYNCRIP
PSMA7
CLP1
MIB2
PCIF1
EIF1
RMND5B
GADD45A
TRPM4
HRC
BEST1
MIF
SLC38A2
TMSB4X
SCAND1
ASF1A
USP25
PTP4A2
ITGB1
NME2
TUBA1C
CTNNB1
LATS1
H3C12
FCHSD2
FHL2
SRSF6
MAML1
MTDH
SRSF2
SLC25A3
MFSD11
ZNFX1
LAMC1
LSG1
H2BC9
AURKAIP1
PHC2
OARD1
NFYA
RPSA
FGF2
FNBP4
ZNF517
RPL8
GTF3C5
HMGA2
TPM4
RCC1L
HSPA8
VCL
VIM
EMC8
EFNB3
COX4I1
SRSF7
SH2D3C
CDK9
DIAPH1
SYF2
POLR1B
PPM1L
KLF6
DCBLD2
CUL1
CITED2
ADNP
ZBTB37
TBCA
ZNF34
CDT1
APRT
RPS12
DVL3
BCL2L13
ATAD2B
ATP2A2
FUBP1
DNAJB4
RPS3A
PTPN9
HMBS
H2AX
DPAGT1
DDX17
ETS1
ZNF143
PPP1CB
FANCI
TLE2
UQCC3
LBHD1
CSKMT
C11orf98
TEX46
KDM1A
EGLN1
TWSG1
MARCHF7
KAT7
HSP90AA1
TAF1D
STXBP5
H2AZ1
DNAJB14
C11orf54
DCUN1D1
GOLGA3
PIF1
IRF2BP2
ACTR3C
GADD45B
UBTF
TANK
ZCWPW1
PPP1R35
MEPCE
FBXO30
SOCS6
CAPZA2
VEGFA
SLC20A1
NOTCH2
EEF2
CLIC4
ZC3H4
ATP8A1
RPL10A
ZNF207
C17orf75
RAB13
APTX
LSR
IER5L
WEE1
SOCS5
MATR3
RPL18A
TCF12
PHLDB2
CEBPD
TNPO1
DDX19B
AARS1
GINM1
TBCC
BICRAL
FBXL14
RRAS2
METTL23
SKIDA1
MLLT10
COMMD3-BMI1
COMMD3
BMI1
CNOT10
CYTH2
KMT2E
RPS6
NRIP1
JUND
IQCN
RBM22
SFPQ
PSPC1
MKLN1
DCP1B
EGR1
ZFHX3
NAA25
PPM1B
MTREX
GTF3C6
FSTL1
DHX29
ZC3H12C
HOXB8
MAP4K4
HNRNPH1
PRRC2A
AIF1
MED13
POLR2M
PBLD
HNRNPH3
FBXO11
RPL15
NKIRAS1
ITPRIP
GRIPAP1
SCYL1
LYRM7
HINT1
SMC4
IFT80
DNAJA1
ANKRD17
RPS24
POLR3A
BAG3
TNPO3
CREM
ZFYVE28
PTPA
CRAT
ZBED6CL
LRRC61
SENP3
ACAT2
SPATA9
RHOBTB3
WDR37
IDI1
GABPB2
CCNL1
GALNT2
DCAF8
PIK3CA
EPHB2
RTN4
JUN
PLXNA2
DYNC1LI1
HDLBP
ZYG11A
RPS27
RPS23
FBXO28
ATP6AP1L
CALM2
CDV3
AKIRIN2
ANKRD12
B2M
ZNF286A
IFI27
PPP4C
HMGB1
CEP350
PPP1R15A
PLEKHA4
PAK2
DYRK1A
RDX
ATP5PD
TMEM242
SYTL3
DYNLT1
RPL3
RPL5
POU3F2
SIX1
RND3
PPP3CC
SRPK2
MSL2
PDE4DIP
C16orf87
KLF7
ALDOA
TIMM17B
PQBP1
EIF2S2
HNRNPA0
SYPL1
ACYP2
ZFP14
CD70
PTMA
NUP205
PPP4R3B
HNRNPM
HIF1A
FLVCR2
HEXB
SOCS3
SUPT4H1
ACSL3
HOXB9
RPL22L1
ZNF319
USB1
DCAF5
RNF24
DDIT4
RNF146
CTSB
NMI
JMJD1C
PPM1K
KDM2A
CCDC115
ARIH1
JMJD6
SEPTIN2
CDKN1B
APOLD1
BAZ2B
FAM174C
CIRBP
SKP1
STK24
PLEKHG5