ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111321 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◢ SRX111320: BE(2)-C

◣ SRX111321: BE(2)-C

◢ HOXC9: STRING

NRL
DCAF11
DEPP1
TNFAIP2
GALNT16
SLC6A2
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
GLDN
ING3
UBXN10
DUX4
FBXW2
NRSN1
ZSCAN31
STRN3
AP4S1
KIAA0319
SEMA5B
GPR68
LPIN1
PRR13
HOXC4
TOMM40L
APOA2
SLC25A25
WIZ
KATNB1
PIH1D1
ALDH16A1
KCNAB2
SLC17A8
OLFML2B
HES6
CMTM4
SMYD3
DIABLO
RIMBP2
PPP5C
ZNF654
CGGBP1
ITGB5
C1orf185
CPO
GFRA3
SYBU
CITED2
C6
MFSD6
RMDN3
WDR74
MTRNR2L2
MSH3
DHFR
DRGX
CENPF
GABRA1
SRGAP2C
SRGAP2B
PHLDB1
GRWD1
NCK1
TIAM2
RAPGEF2
LIMS1
GDF11
ABCA12
BFSP2
C14orf180
C1orf100
TLE3
SULT1C4
TBX15
LENG9
IGFBP5
PHF14
GNL2
COMTD1
TCF4
ELAVL4
VAV3
CHD1
KCNK16
MACROD2
SLC12A3
ZBTB45
HOXC6
MTRNR2L8
SLITRK5
IFT57
PRKD3
ATG9B
ABCB8
PARVA
CHCHD3
PRKAR2B
CRYBG1
EXOSC2
P2RX1
MECOM
NTN4
TNFRSF19
COX16
ZZZ3
KBTBD11
DCLK3
PLEKHS1
RSAD2
TAS2R20
ADGRD1
LRRC15
MAD2L2
GGT1
TSHZ2
KHDC4
IGDCC3
FOXN4
HAPLN1
PHOX2B
EVI5L
OPRM1
NTN3
RBKS
BABAM2
ZBTB39
DNAJB8
DAOA
CYTH3
ADCYAP1R1
GJA5
GSX2
STON2
ATF3
ZNF488
TRIO
FAM163B
IQSEC1
TRIL
EEF1AKNMT
PPM1A
TFPT
PRPF31
CHRM3
MTRNR2L1
SYNE3
ABAT
SMAD9
VPS52
RPS18
EPOR
SPINK5
KL
PLEKHA5
SLAMF8
KIF26A
GGCT
KDM4B
NRG1
PLXNA1
VSTM2A
B3GLCT
CDCA3
NPTXR
LIMA1
PWWP2A
CHST6
RARB
PRKG1
DRD2
SGIP1
DIPK1A
PPP3CA
H3C15
H3C14
H2AC19
H2AC18
DLX6
ZFAND6
WNK1
COX7A2L
TIMM44
DIXDC1
RAB11B
NSD2
RGS4
AOPEP
MPP4
CATSPER3
AFF3
C3orf52
FRG2C
CDH18
CARS1
MFSD8
ABHD18
FRG2
USP7
LOXL1
ZNF350
MFSD12
SIRT4
SLC31A2
SLC7A14
ZNF510
USP40
SH3GLB2
BAMBI
RIC8B
MTHFSD
ANKH
FAM219A
DNAI1
TMOD1
SLC17A2
GPR107
LYN
UTS2R
PRKAG2
ZNF552
RAB39A
MAPK13
KHSRP
BEND4
SEMA4B
CCNG1
MTA1
ICA1
PLA2R1
HEBP2
TECTA
PAFAH1B2
COL21A1
ZNF555
ACVR1
TOM1
SRP14
GOLGB1
SNAP23
CHD9
ITM2C
CYP8B1
RAG1
ARFIP1
PMVK
PDZRN3
PSMB2
RMDN2
SH2D3C
CRYGB
GPR83
MRPS14
PDE3A
SLC35B4
ABT1
PTBP2
TUB
ARL14EPL
ASNSD1
ASDURF
FAM107B
RNF4
QSER1
EFCAB6
ITSN1
CRYZL1
APMAP
HEXIM2
MUC3A
CAPN10
RNF24
MAP1LC3B
FBXO31
AGL
ILF2
KCNAB1
ZNF608
NEMP1
ANKHD1-EIF4EBP3
ANKHD1
RBM15
EIF3D
EPRS1
PCOLCE2
RAB14
GSN
LSMEM1
XAB2
PCP2
AMMECR1L
PSMC1
VEPH1
FDPS
BCL9L
TMEM126B
DLG2
PSENEN
LIN37
TJP2
HTR4
TCERG1
GP5
UBE2V1
ZFPM2
PBX3
PRRC2B
SNX7
TPM1
TBRG4
TMEM60
PHTF2
RACGAP1
PRPF4
CDC26
SUGP2
ARMC6
RAPGEF3
MRPL28
KNL1
DHRS2
RHBDD1
TBCC
BICRAL
KCNK15
MRPL27
EME1
PC
SLC48A1
HOXA6
HOXA3
ZNF132
PDCD1
ADAMTS19
TPGS1
PSMD6
FLYWCH2
C14orf93
PHKB
ITFG1
CEP152
NOMO1
DBH
IGFBP3
MARCKS
ZNF667
ARID5A
SHC1
FLAD1
CKS1B
PRUNE2
TBX2
RAB31
TBC1D4
DPH2
ATP6V0B
MC4R
REX1BD
LIPG
SLC18A1
CPN2
TCP1
MRPL18
ASF1B
AP1M1
PTPDC1
SPSB3
NUBP2
MEST
ARHGEF3
AKAP11
SORL1
MAP2
SELENBP1
EHD4
ARID5B
MDM4
STAMBP
GBA
RPS7
SMCO3
GDF5
CEP250
OSBP2
VSTM5
MN1
TBC1D2
PRKAB2
CHD1L
GNG12
SNX6
C3orf38
TTC12
ZSWIM4
TLN2
ZNHIT3
MRTFA
NOSTRIN
PRR25
CAND1
THRAP3
TLX3
ETS2
SYNPO
CCDC33
ASXL2
CAMK4
BAX
ERMAP
KIAA0895
ANLN
NME7
BLZF1
SORT1
ZNF566
B3GALT2
SDR39U1
PHF19
HOXA5
ADGRE5
CREBL2
FOXP1
RASGRP1
RFTN1
ACSS2
FCF1
AREL1
MKKS
KRT19
NUMB
SEPTIN11
TIGD6
HMGXB3
ZNF749
PTBP1
GPRC5A
WRN
PURG
ESRRB
HERPUD1
ZNF417
INTS4
NGDN
TUBB2B
RIMS2
RUFY3
RPP25
NFYC
TUBB1
ANO6
TRERF1
NCOA2
RABGAP1L
AHCYL1
POGZ
GCSAM
DDX41
NDUFB5
MRPL47
TUBA1C
RPS26
WBP4
ELF1
ULBP3
STYX
METTL25
CCDC59
LARP1
TNRC18
LOC100129484
CCDC38
AMDHD1
RP1L1
UHMK1
ANTXR2
TXNRD1
LRRTM3
WAC
MLLT3
TMEM100
ABCC5
CCDC130
CERKL
POLR1H
RBM25
GALK1
FRMD3
HES1
LCN9
PABPN1
PDE4D
CCDC89
SKA2
PRR11
ZBTB40
GABRR1
FOXN3
GRAMD1B
GAST
ZNF430
MEX3B
SYT15
LOC102724488
SRPK2
ALG10
UBA5
YLPM1
SEL1L
TDRKH
ZSCAN32
ZNF174
FAM214A
BAHCC1
B3GNT4
DCC
PDIA6
COA1
LRGUK
LPAR5
BBX
PLAC1
CHST12
PCSK6
PRSS41
WDPCP
PODN
CFAP69
USF1
C12orf73
PALB2
DCTN5
GTF2A1
EGR1
HS3ST5
CEP41
SULF2
CNPY2
CNIH4
CYP19A1
FBXO34
CNOT3
UBE2J1
MAIP1
ZNF148
HAPLN2
VPS72
TRAF7
LGALS8
SLC36A4
SH2B2
ZFYVE26
RAD51B
HNMT
TRIP10
GPR108
ECE1
FOCAD
COX7C
DMAC1
NAPB
EHBP1
ID4
CALM2
E4F1
RPL27
MYT1
MRPL34
DDA1
UBE2S
RHOQ
CFAP20
CDIN1
CAPNS2
ATP6V1E2
MOV10L1
AGTR1
PKD1L1
LRMDA
HIGD1C
CLASP2
PTPRE
SRRD
HPS4
UTP25
PRL
AKAP6
SPATC1L
ASB6
TOMM40
CYTH1
TMCO5A
TMEM94
CEP85L
TM7SF3
ALG10B
DACH1
ZMYND8
HAND2
ZNF331
DHX8
CHAC1
CLDN4
FGF14
B3GNT3
RNF224
CYSRT1
POLR3E
HIC2
MRPL11
SLC8A1
SLC34A3
JPT2
TDRD9
ATP5MPL
WDR46
PFDN6
PPP2R2C
SLC26A7
MAP1B
COX20
SLC7A5
GTSE1
ERCC6L2
METTL7A
ICE1
SMAD1
TUFM
SH2B1
LARS1
SFRP4
EPDR1
C15orf62
ZNF25
RBM12
CPNE1
MTA3
KCNG3
NECAP1
EML4
SERP1
EIF2A
ZNF226
COG7
BCL2L13
RHOB
EPB42
BCAS3
ASB8
LINGO1
ISLR2
THEMIS
KDM7A
KCNT2
FAM13B
PTGER2
SRCAP
LOC730183
GRK5
RET
C12orf43
RBFOX2
SF3B6
FAM228B
MLC1
STARD13
WWOX
MIA3
KCNH2
SCAF4
IRS1
BAZ2A
SLC25A16
SHC4
APBA2
ETFBKMT
ANKRD40
ZNF792
ZC3H11A
ZBTB12
ZBED6
TXNL4B
SURF6
SEPHS2
PODNL1
LY6G6F-LY6G6D
LY6G6F
HOMEZ
EHMT2
DHX38
DCAF15
C2
ABHD16A
TNS1
MYL10
SLC26A2
ZNF586
COG3
CENPA
KCNMB2
CDK12
ZNF682
MICU1
LONP1
CATSPERD
CYP51A1
PSME3IP1
SSRP1
P2RX3
RFT1
INTS5
STX6
TSPAN12
TRIM24
PXMP4
KRT20
CDC25C
BICDL2
DAB2IP
LOC100289561
ELMO1
PRMT5
DST
OTOGL
PARP1
MED27
DOCK1
CDKAL1
SUPT7L
SLC4A1AP
SARS1
SEC22B
CARD8
BDNF
ZMYM1
TMEM231
GRIK4
ZNF30
UBALD1
OTUB2
KDM5B
SLC44A3
TAGAP
TRMT61B
IRF2BP2
VPS45
AUH
MXI1
FAM160A1
COBLL1
BTN3A1
CSMD3
COPS7A
TAF1A
HTR2B
DUT
DGKB
NT5C2
ZNF317
HPS3
STK11
SLC39A9
ERH
ZNF234
TSPAN14
TMEM178B
THOC5
SLIRP
PTPRR
CXCL17
CPLX3
ALKBH1
NOMO3
SLX4IP
PHB2
RBP5
CLSTN3
ARHGAP24
TUBG1
RETREG3
KCNJ3
VLDLR
ARL17B
ARL17A
ANXA2
ZNF227
SETD9
RAB30
SLC37A3
ZNF503
TFAP2B
MYNN
MESP2
ADAMTSL2
ACTRT3
MGAT4C
DPP9
STRA6
TRIOBP
SP2
SHD
SELENOW
TP53BP1
YIPF4
OSBPL6
TMEM35B
RBL2
MTFP1
OAF
H3C13
H2BC18
NBN
HP1BP3
GTPBP10
CDIPT
ZSWIM3
ACOT8
SEC14L1
RSPH9
PHF12
PIGM
AMOT
MAP2K4
TARS2
CNOT1
TTC31
CCDC142
CRYBG3
POLR2J3
ZNF773
ZBTB3
TMEM41B
MIR1-1HG
LDLRAP1
FAAP24
EML2
CEP89
CCDC86
SUGT1
ZFHX4
PRICKLE1
JMJD1C
RTRAF
SLC35A3
EPHA6
TMEM79
SMG5
TPD52
MSRB2
ZNF548
CRYM
ID2
GSK3A
ITM2B
MVB12A
ZNHIT1
UBP1
PLOD3
H2BC6
STK11IP
VEZF1
MBNL1
RBMS2
PCNX4
BCL2L10
WDR89
CUX2
HAGH
FAHD1
BANP
TNRC6B
MAST4
BAZ1B
DAPK1
SMIM30
HEPHL1
DESI2
BLOC1S6
VIPAS39
AHSA1
PCBD1
NAA16
ZNF423
MYH15
MTRF1
HIBADH
GINS3
RPRD2
NEURL1
H2BU1
H2AW
PLXNB2
OSBPL9
PPIL1
C6orf89
USP54
TYK2
PCBP3
MIOS
FOXD4L4
TPCN1
GLE1
ZNF251
HNRNPUL1
PRCC
TAS2R13
ST8SIA3
PIK3CA
TFAP2A
IRF2BPL
RAB11A
EPHX1
SLC2A3
ZNF738
POP5
P2RY12
GPR151
DEGS2
C5orf63
BCAS2
MATR3
TMEM101
SNX17
EIF2B4
ERGIC2
RAB5B
ZNF687
SIKE1
COQ7
BRD3
CSDE1
RAD52
PRKCSH
CCDC151
MYL6
MED25
FUZ
TAMALIN
MPV17L2
PSMD8
BOK
FILIP1
PRRT4
TMBIM6
GNA12
EYS
ATP2B4
SDE2
GLIPR1L1
CAPS2
LMAN1L
SYMPK
RGS10
FOXA3
DUSP6
CYB561
WNT5A
G3BP1
CLDN15
SEMA3C
TOMM70
NCS1
LNP1
PEX12
LCN6
RASA3
MMACHC
TVP23C
DPYSL2
ZKSCAN4
SLC25A44
SLC24A1
PTP4A3
NSUN3
KRTAP5-11
FAM72B
DHFR2
PGM2
MRPS33
TSPAN8
RBM28
ZNF225
MRPS23
ZNF264
DLC1
TANC1
FAM222B
EIF1AD
CDK17
BANF1
TRUB2
COQ4
SLC41A2
KRT13
TM9SF4
MYO18B
MSTN
NDUFB3
FAM126B
PTH2R