ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
PPP5C
KIAA0319
HOXC4
SEMA5B
ZSCAN31
PIH1D1
TOMM40L
KATNB1
TIAM2
PRR13
DRGX
SLC17A8
DIABLO
GFRA3
RIMBP2
MTRNR2L2
ZNF654
CGGBP1
SLC25A25
SRGAP2C
SRGAP2B
WDR74
ABCA12
KCNAB2
RAPGEF2
C1orf185
CHD1
HOXC6
LENG9
GRWD1
GABRA1
ABCB8
ZBTB45
MTRNR2L8
CENPF
CHCHD3
TAS2R20
EVI5L
PHF14
ELAVL4
ILF2
KHDC4
ZNF488
COX16
TNFRSF19
STON2
PWWP2A
PRKAG2
EEF1AKNMT
EPRS1
MRPS14
TFPT
PRPF31
H2AC19
H2AC18
CCDC33
ABAT
TIMM44
TBX2
MFSD12
CHD9
TMEM60
PHTF2
SUGP2
ARMC6
SIRT4
CDCA3
ZNF555
MRPL28
CCNG1
ZNF510
RHBDD1
USP40
PSMC1
NEMP1
VSTM5
VPS52
RPS18
RAB39A
INTS4
MGAT4C
SYNE3
FDPS
RIC8B
GOLGB1
PAFAH1B2
DLX6
RNF4
TOM1
RAB11B
ASNSD1
ASDURF
HOXA3
AOPEP
ITSN1
CRYZL1
PMVK
ACVR1
RGS4
ID4
ASF1B
RP1L1
SLC18A1
KHSRP
ASB8
MPP4
ANKHD1-EIF4EBP3
ANKHD1
RBM25
EFCAB6
PDCD1
CALM2
TUBG1
RUFY3
RETREG3
HEXIM2
TCERG1
RMDN2
ZNF350
SLC17A2
MN1
SH2D3C
TMEM126B
DLG2
PRRC2B
ADGRE5
DPH2
UHMK1
NGDN
ZNF132
RABGAP1L
NOMO1
SUPT7L
SLC4A1AP
TPGS1
MFSD8
C3orf38
ABHD18
VEPH1
ESRRB
GSN
DBH
SARS1
ULBP3
LIN37
SMG5
ALG10B
GBA
PIGM
MLC1
RBM12
CPNE1
ABT1
ZNHIT3
NFYC
MAIP1
EIF3D
ZSWIM4
LSMEM1
MTA3
CREBL2
FCF1
AREL1
MRPL27
EME1
CAND1
XAB2
COG3
ERCC6L2
MC4R
TCF4
CDIPT
FLYWCH2
BAX
ANO6
ZBTB40
EHD4
AKAP11
RPS7
E4F1
SRPK2
PDE4D
CCDC89
CAPN10
HES1
NOMO3
ZNF608
SKA2
PRR11
MAP2
NDUFB5
MRPL47
MFSD6
ARHGEF3
TRUB2
COQ4
TFB2M
CNST
C12orf43
BCAS2
ARL15
TOMM40
CYTH1
RFT1
DAB2IP
RPL27
METTL25
CCDC59
WDR89
PTPRE
CFAP69
ICE1
TNRC18
ZFYVE26
SNX6
NUF2
MYT1
ZNF566
PCDH15
GLDN
USF1
CSDE1
COPS7A
VLDLR
STRA6
RPS26
BLOC1S6
TMEM245
TMBIM6
MDM4
HAND2
COL5A2
ZNF749
HAGH
FOXN3
FAHD1
CEP41
ZNF417
ZFAND6
POLR1H
STUM
PAXBP1
ALG10
WWOX
COX7C
ZNF317
MAP2K4
INTS5
RPRD2
PTBP1
MIA3
EYS
TUFM
SH2B1
PABPN1
SEL1L
ZNF331
KRT13
TRIOBP
TDRKH
MATR3
HNMT
BAZ2A
SERP1
KCNH2
FBXO34
EIF2A
ATP2B4
SUGT1
UTP25
SPSB3
NUBP2
MTRNR2L9
TARS2
DDX41
DDA1
TNNT2
POLR3E
LARS1
GRAMD1B
CLDN15
ZIK1
SEMA3C
LOC100289561
C12orf73
WDR46
STAMBP
SP2
SF3B6
PFDN6
P2RY6
FAM228B
FOXP1
ELMO1
DDX49
COPE
ZNF226
ARL17B
ARL17A
VIPAS39
TCTN3
RBL2
H4C3
AHSA1
SDR39U1
PALB2
GPRC5A
DCTN5
CENPA
ZCCHC8
SHD
SLX4IP
COG7
DMAC1
ZFHX4
TM9SF4
NOMO2
KCNT2
LUC7L2
FMC1-LUC7L2
FMC1
UBE2S
TXNRD1
UBA5
TRMT61B
OSBPL9
GNRH1
TSNAXIP1
RANBP10
PPP6R1
MRPL11
KCNMB2
ZSCAN32
ZNF227
ZNF174
SELENOW
HNRNPL
HDAC9
H2BC6
C15orf62
TSPAN8
SNX16
MRPL44
CNOT3
CCDC146
CCDC130
CARD8
RAD52
FAM98B
DHX16
ZMAT2
YJU2
RBM28
CNOT1
STK11IP
MORC3
LNP1
BDNF
ZNF225
NBPF15
TBL1X
FRA10AC1
YLPM1
SPATC1L
SLC39A9
PRMT5
ERH
STT3A
PHB2
GPR1
ATF6
VPS45
JMJD1C
CCDC38
PSMD3
MYT1L
ZNF548
TSC1
SYBU
PLXNB2
HNRNPA1
GFI1B
CBX5
ATP5MF-PTCD1
ATP5MF
TP53BP1
DPP9
DPP6
SULT1C4
PRKAB2
OIP5
NUSAP1
CHD1L
ZSWIM3
CEP85L
ACOT8
ZNF229
VPS29
RAD9B
MARS1
GLIPR1L1
FREM1
ARHGAP9
RTRAF
PEX12
PES1
ATP5MC3
ATP5F1B
TTC31
TMEM69
TMEM231
LCN6
GPBP1L1
CCDC142
ARMH3
RAB30
MRPS23
EIF3F
ATP5MC2
ANKRD40
ZNF264
NFATC4
KNL1
PPP1R12C
TNRC6B
SNX17
EIF2B4
AUH
SUFU
RBP5
MBNL1
CLSTN3
ACTR1A
TOX4
RAB2B
WDR36
ZNF175
TMEM259
RAB11A
ARNT
NFATC2IP
JARID2
POLR2J3
PNISR
IPO4
RAB3C
MSTN
MAST4
SF3B5
PPIL1
MYL6
FUZ
CDK12
BANP
PDCL
H3C13
ZNF484
TAMALIN
LITAF
KLHL20
FAM243B
FAM243A
APOLD1
SSBP1
RPS11
RBBP5
MRPL3
HS3ST5
ERGIC2
COX20
ASPM
MRPL24
MBIP
PHB
METTL7A
FANCM
CBFA2T2
LUM
TBRG4
RTN4IP1
QRSL1
CEP120
AP2S1
RASA3
KCTD5
RAB5B
MRPL54
LETM2
APBA3
ANGEL2
ZNF668
ZNF646
SPAG9
ENDOG
CEP128
TAF5
SREK1IP1
NDUFAF5
ESF1
CWC27
ZNF304
SPRY4
PNKD
HNRNPUL1
AAMP
TTR
RBM48
PEX1
KRR1
GPR85
SOX4
GSK3A
CCDC90B
USE1
MMACHC
YARS2
MRTFB
LETMD1
QDPR
GGTA1
GALNT14
FAM126A
CWF19L2
TCP1
SHPRH
RC3H2
OGFOD1
NUTM2E
NUDT21
MRPL18
ZNF267
SYNJ2BP-COX16
SYNJ2BP
SP1
STC1
SMARCD2
GTF2H4
GRAMD4
ZNF805
DLC1
B4GAT1
AP1M1
TRMT12
MVB12A
LRIG2
DPYSL2
ACTR6
SEMA6D
PIP4P1
MED16
KLHDC9
ZNF74
ZNF473
VRK3
AP3M2
NIP7
COG8
MPV17L2
TMEM160
THUMPD1
PRCC
PPIL3
NIF3L1
CAPS2
SSUH2
SF1
ZNF776
SLC41A3
ZNF493
SIX3
SIRT2
RPL6
NFKBIB
FDXR
BUB1B-PAK6
WRN
RABEPK
MVK
LINS1
ASB7
SFR1
PPP1R3D
FAM217B
ZNF565
ZNF146
RIMS2
PHF5A
DDC
ANKRD54
ACO2
CCNT1
SRFBP1
SLC4A2
CDK5
MRPS15
KIF3B
CUL2
ZSCAN9
YAF2
CLDN11
ZNF106
SIX4
PEF1
LRRTM3
CSRP1
BUB1B
ANAPC15
OS9
FEM1A
ANP32E
DNM2
SLC16A14
RAD51AP1
POLG
C12orf4
ZNF790
ZNF430
RPS27
PSMD1
ZSWIM8
SPRING1
RNFT2
SECISBP2
PAF1
MED29
FAM214A
SPART
LRGUK
LPAR5
BBX
HAO1
TMEM167B
MRPS33
CNPY2
CNIH4
UBE2J1
RPTOR
NCAM1
TRMT1
TRAF7
MEIG1
LGALS8
CEP126
GPR108
CMTM2
ZNF302
ZKSCAN5
TSPAN3
SBDS
NPY2R
FOCAD
ZNF629
SNRPE
CFAP20
ADAMTS5
RBM8A
RALGAPA1
RUVBL2
GYS1
CYP19A1
DHX8
CHAC1
CCDC9B
BRMS1L
SLC8A1
JPT2
GTSE1
ZNF25
PGBD4
EMC7
ADAMTS17
RHOB
PEX3
EXOSC2
BCAS3
ATG2A
ADAT2
NABP1
CIZ1
NUDT13
CLPB
ATXN7L3B
ZNF263
SPAST
OPA1
C10orf88
TMEM106B
SMC4
SLC25A16
SHC4
OGDH
IFT80
ZNF155
ZC3H11A
TXNL4B
SURF6
SIPA1L2
SEPHS2
HOMEZ
ETFBKMT
EHMT2
DHX38
DCAF15
C2
ABHD16A
ZNF586
SCHIP1
ZNF682
SART3
RPAP1
LONP1
ISCU
CATSPERD
TRIM24
PXMP4
CLASP2
CDC25C
ZNF169
PIF1
PARP1
CDKAL1
ZNF30
OTUB2
SHF
MXI1
BTN3A1
ZNF777
TLR7
SECISBP2L
RTTN
RPF1
N6AMT1
MPND
FBXW7
ELOC
COPS4
TAF1A
RPL38
DUT
ZNF234
ZBTB18
TMCO1
THOC5
SLIRP
NBAS
EPHB3
ALKBH1
ZNF821
STAT3
FAM220A
CHRM5
ARHGAP24
ZNF503
TACO1
MAB21L2
ADAMTSL2
YIPF4
RFX3
PAPOLA
EYA1
ALK
MSH3
HP1BP3
GALK2
DHFR
COPS2
SEC14L1
PLEKHM3
PHF12
ZNF773
ZBTB3
TMEM41B
PRPH
KMT2D
FAAP24
EML2
CEP89
CCDC86
ZNF614
SF3A3
GPR180
GOSR2
ZNHIT1
ZMAT4
ZC3HC1
UFD1
UBP1
THAP4
PLOD3
NVL
LRRC17
GATAD2B
EMC4
CDC45
UBR2
RBMS2
VPS25
SMIM30
EAPP
DNM1L
DESI2
ANKRD17
UBE2F
ROCK2
OGFOD2
MYH15
HIBADH
ZSCAN12
ZKSCAN3
USP54
TYK2
TXN2
SMG7
MIOS
DNAL1
CLN3
SPRED1
PPRC1
PIK3CA
MADD
COTL1
CHKB
ZNF738
POP5
HDGFL2
ELL
CLVS1
C5orf63
ZNF687
UBB
SIKE1
FUBP1
DNAJB4
COQ7
CHD8
CGAS
PSMD8
NLGN1
LRWD1
BPNT1
ALKBH4
WDR12
SYMPK
PLA2G6
KBTBD8
ISY1-RAB43
ISY1
GMPPA
DUSP6
CARF
ZKSCAN4
SMG8
SLC25A44
PRKCE
NSUN3
FAM72B
DNAJC25-GNG10
DNAJC25
DHFR2
ANGPT2
SLC35B1
LRRN3
FAM222B
EIF1AD
CDK17
BANF1
AP3B1
WBP1L
VPS50
RERE
POC1B-GALNT4
POC1B
NDUFB3
LMAN2
HMGCR
HEPACAM2
FNDC3A
FAM126B
BMF
ZNF726
SLC1A5
RALGAPB
CIAO2A
ZNF737
ZNF230
THADA
STEAP3
RPL23
RNF6
RBM19
PMPCB
MED18
KDM5C
KDM3A
HOXD3
EPS15
ATF3
ZNF8
ZNF627
KLHL25
ETV5
CAMTA1
C15orf40
RAB8A
NFIB
ADAMTS1
ZNF785
ZNF552
VPS41
TAFA2
RPL3
PROSER1
NUP58
NHLRC3
IKZF4
GSTA4
DYNC2I1
UTP11
SDHD
RMND1
PTRHD1
POLRMT
MFSD14C
CENPO
BTN3A3
ARMT1
ZNF440
STK16
RPL24
RNF150
NDUFS4
GLB1L
FHL2
BAIAP2
ZNF789
YME1L1
POLL
PCBP2
MASTL
GOLPH3L
ETV1
ERCC2
DPCD
YIPF2
UTP3
TUBB4B
TIMM29
PSMB4
NFIA
MED30
HTR1A
ETNK1
ZNF92
TPD52L2
SPHK2
RPL18
RBFOX2
PYROXD1
LCA5
CDK5RAP1
CCDC61
TTC37
SALL4
MRPS22
CD63
ARSK
AQP10
ZNF419
UBQLN4
LAMTOR2
GTPBP3
FTCDNL1
FCHO1
DSTN
DIS3L2
ZNF688
YOD1
WDR83OS
WDR83
WDR70
UBXN2A
TSSK6
TOR1A
SETD1B
SCNM1
RDH11
PSMD9
PPIP5K2
PFKFB2
NR2F1
NDUFA13