ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
MTRNR2L9
WDR74
STX5
DYNLL1
LEKR1
EMILIN2
EAPP
MTRNR2L10
H4C14
H3C15
H3C14
H4C12
H4C11
H2BC15
H2AC15
H4C15
NGB
SCRIB
MAMDC2
MTRNR2L6
MTRNR2L1
DUX4
ZC3H10
RPL41
ESYT1
H2BC4
H2AC6
WASHC2A
WASHC2C
LOC112694756
LAMP1
H2BC14
H2AC14
H4C3
H1-6
C1orf198
TAF12
PARP16
SCML1
PAFAH2
POLDIP3
SIRT4
POLR2J3
PCNA
TMEM230
CDS2
SKIDA1
TMEM107
MUC3A
FRA10AC1
STAT1
HSPE1-MOB4
HSPE1
HSPD1
TRMT2A
RANBP1
KIF2C
GBA
MTF2
CASQ1
H3C4
H4C4
H2BC6
TM9SF1
IPO4
TEX9
RFX7
DNAJB4
B4GALNT3
SLC20A1
ATR
H4C8
SCGB1C2
SCGB1C1
ODF3
AMDHD2
ATP6V0C
TRIM48
IRF9
INTS12
GSTCD
PHF23
GABARAP
DVL2
NCBP3
GSPT1
CALM1
TAP2
PSMB8
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
NUF2
DAB1
OMA1
H4C9
H2BC12
H2BC11
H2AC12
H2AC11
MDN1
YIPF2
TIMM29
CASP8AP2
TSR3
GNPTG
KRTAP21-2
KDM3B
LOC102724770
DGCR6
UBTF
TMEM216
LRRC37A3
H2AC19
H2AC18
SLC9A1
CDKN2AIPNL
MTERF1
ARMC7
RAE1
MTRNR2L3
VPS33A
POR
MDM2
ACSL3
PIM1
VPS13D
AFF3
DRAP1
C11orf68
DPY19L4
NOTCH2NLC
NOTCH2
PTEN
KLLN
RHOT2
RHBDL1
PMF1-BGLAP
PMF1
RBIS
PRR5L
COMMD9
ZCCHC4
GORASP2
ZSCAN30
NPAS4
GTF3C3
C2orf66
BNIP1
DENR
LRFN3
HS1BP3
TOR1AIP2
TOR1AIP1
RPS7
VOPP1
TDRD7
NOLC1
CCNC
ZMPSTE24
RAP1GAP
NCF4
RRM1
GNAI2
NME1
BBC3
ASB2
ADNP
HEXA
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
JUND
IQCN
PRND
CLCN7
IKBKG
NUP54
SF3A3
MPDU1
LOC100996842
EIF4A1
CD68
MAPK11
RNF223
SLC35B1
AURKAIP1
MRPS23
NOXO1
RPS2
RNF151
TBL3
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
MAP1LC3B2
EXD1
CHP1
BCL3
STX16
COMMD2
PLEKHM3
SLC2A4RG
LIME1
TSN
MARCHF8
DDX1
POLR3B
ACTR10
ZNF507
CTNNB1
SLC39A13
LRRC59
COMMD4
ABCA3
TCTN3
TVP23B
SLC38A7
AKAP11
CSPP1
COPS5
NDUFS7
MED23
MRPL44
SSBP1
TTYH2
RPL38
STAM2
FOXJ3
DHX33
PDE11A
RBM45
PTPN6
C12orf57
MRPS18C
HELQ
ALG10B
HPS6
ARMH3
BAIAP2
SLC25A51
ATP5MC2
CDK5RAP1
BHLHE23
UBXN6
RABL2B
PTMA
HASPIN
DENND4A
OR2L13
OR2AJ1
STX18
ERVH48-1
CACTIN
RBM28
POLR2J
PSMD3
SHMT2
NDUFA4L2
ZNF25
N4BP3
SMARCD2
STAT3
H4-16
H2AJ
LSM11
GRAMD1C
POLD3
ATP6V0D1
AGRP
UBALD2
NAGPA
RBBP5
BHLHA15
RABL2A
DGKZ
PRRG2
NOSIP
TLR5
BCL2
RHOF
SETD1B
XKR7
TRIM69
AP1M2
FAM227B
DTWD1
INTS1
TMEM147
CDC42BPG
CSNK1D
STK17A
ID1
RDH5
ITGA7
BLOC1S1
DSTYK
GTF2H2
CAB39
GRM4
SNX16
WASHC5
NSMCE2
RPL10A
NSUN4
SHISA5
TREX1
SCAND1
EIF3F
SMIM41
SLC12A6
NUTM1
NOP10
ATG101
NCAPH2
LMF2
HDGF
MRPL24
POLG
TRAPPC3
MAP7D1
DCK
NOXA1
TAF3
ABHD17A
MAPK8IP3
IQCG
UGT8
RPL35A
PHRF1
TATDN3
NSL1
PDE6D
COPS7B
PHB2
NUP205
NOTCH2NLB
NOTCH2NLA
DCP1B
RPL21
ZBTB45
SLC27A5
DIAPH1
TTC8
CYP1B1
TMEM242
R3HCC1
GLIPR1L2
ACTRT3
MYNN
CDC37
PLCD3
ACBD4
CERS2
ANXA9
GALK2
COPS2
SRRM3
TMEM115
NPRL2
CYB561D2
TSSK4
COL4A2-AS2
MLEC
RBM39
ZSWIM1
SPATA25
NEURL2
CTSA
ZNF341
UNK
H3-3B
SMPD4
MZT2B
ZFP36
SH3GL1
MRPL23
COX16
CHAF1A
PAF1
MED29
BPTF
FFAR3
FFAR1
TRAPPC8
TMED9
B4GALT7
SNX18
IER3
FLOT1
RMDN2
RBM17
UBQLN4
RAB25
LAMTOR2
RAF1
MED27
DCAF10
TBC1D19
RWDD1
SLC17A7
PIH1D1
ALDH16A1
ADGRG1
GABPA
ATP5PF
PPP6R1
FRG1
INTS5
GANAB
IPO13
RPS20
ZNF358
MCOLN1
VPS50
TIPIN
HEPACAM2
LPCAT3
MRPS31
STOML1
RPS15
PML
TOR2A
APC2
JRK
COL9A2
USP3
H2BC17
H2AC17
ZWILCH
SNAPC5
RPL4
NPR1
ILF2
H3C12
HGFAC
PNKD
GPBAR1
AAMP
TMEM127
CIAO1
DCP1A
INO80C
TGM1
RABGGTA
PLEK
HMGN2
CCDC200
MRPL1
TSNAX
PXK
FBXO28
PSMF1
TRIP6
SRRT
CENPS-CORT
CENPS
SLC2A11
ARHGEF12
PEX3
ADAT2
ARSG
TUBA4B
TUBA4A
STK16
GLB1L
AMZ1
PCID2
CUL4A
PSMC3IP
EIF2D
RAD54L
SLC35E2B
TAS2R40
WDFY1
VTA1
NMBR
AP5B1
TSFM
RAD23A
CALR
OVOL1
UNC45B
NLE1
FASTKD1
RSAD1
SKP2
LMBRD2
RNASEH2C
KAT5
CHAD
NECAB3
ACTL10
C20orf144
ARHGAP42
INKA2
ATG16L1
DDX20
MEF2A
TOX4
RAB2B
FBXO5
ART1
SLC39A3
CTSW
KRR1
CCDC85B
LARP1
FIBP
LCN12
FBXW5
C8G
TUBA1B
PPIF
CRYAA
CRYAA2
NFAT5
MAPRE3
PSMG3
NRTN
SELENOH
IL21R
APOBEC3B
RBSN
USP30
CRLF3
ATAD5
VPS29
RAD9B
PRKDC
MCM4
ZFYVE26
RAD51B
TCHP
NMUR1
LZTFL1
HCN2
AHCY
SLBP
TOMM22
TMEM129
TACC3
PRDM1
SLC2A4
TPD52
DPP9
EIF1B
SLC33A1
NUDT17
TOP3B
PRKCE
PRDX1
SPATC1L
ZNF518A
BBS1
SNAP47
JMJD4
ZFYVE1
LRRN3
NR1H3
ACP2
DHX8
DCLRE1B
AP4B1
SEC13
TUBB
MDC1
SPNS1
GNB2
RNPS1
H3C6
H2BC8
H2AC8
ADAR
RPGR
RPL27
IFI35
FAM228B
TP53I3
SF3B6
MOB4
ROM1
EML3
B3GAT3
TAOK3
SUDS3
ANKRD46
SRSF7
MAD1L1
PAXBP1
PRRT2
CLMN
SART1
FAM111A
FCMR
MAZ
NCBP2AS2
NCBP2
NUDT1
MRM2
DUSP4
CCR1
E2F3
ZBTB40
RTTN
ZER1
TMA16
SAAL1
TRAF4
SLMAP
GP9
PNPT1
CDK11B
CDK11A
ACTR3
NDUFS3
KBTBD4
FAM180B
ZNF3
COPS6
SNRPB
KMT2C
UTP3
C18orf25
NBN
TRIM32
ASTN2
U2AF2
CCDC106
TMEM167B
RTP3
LTF
TRIM41
LUC7L2
PDE4A
CDKN1A
SLC24A1
TMEM91
B9D2
ZDHHC4
CNOT6
CIPC
ZBTB4
SLC35G6
POLR2A
ERCC5
NAA80
IFRD2
HYAL3
TGFB1
DERL3
BROX
AIDA
MYEOV
KANSL3
FER1L5
LSP1
CREM
MRPL58
TNFRSF21
PCBP2
TUT1
MTA2
KLHL20
TMSB4X
KLK1
ENOSF1
SMG6
RMND1
ARMT1
CRK
SGCA
NAPA
C8orf76
SMIM29
GET4
FLOT2
DHRS13
TRIP4
PCLAF
ZFAT
MCM3
TSSC4
WBP1
INO80B
ARL14EP
RGL2
PFDN6
CCNL1
VPS45
POLR2J2
FAM207A
UBC
RETSAT
ELMOD3
COMMD1
U2SURP
SNX3
THAP11
PPIP5K2
CCT4
EDC4
ZNF639
ATF3
MMACHC
TESK2
GPR68
NUP153
RUVBL1
EEFSEC
POLR2C
TIA1
PCYOX1
ZNF148
KLHL12
FTH1
USPL1
HMGB1
KMT2E
SLC1A4
NDUFS6
MRPL36
BEST1
KIF21A
MOGS
MARCHF7
PAK1IP1
C6orf52
ATAD1
MED15
MRPL53
TIPARP
METTL7A
KAT6A
SRMS
PTK6
POLR3E
NDUFA6
FLT3LG
UCKL1
ATF4
PRMT5
UBE3D
DOP1A
CARM1
FMNL3
NPAT
ATM
TXNIP
MFSD4B
SNRPE
GADD45B
SSNA1
ANAPC2
TSHR
ARID2
TMEM41A
NFKB2
PHF13
PRR14
TMPO
RAB8A
FBRS
NT5C1A
MPEG1
CCAR2
C8orf58
SLC43A3
CCDC43
ATP7A
TNIP2
TOR1A
C19orf48
CCND3
NSFL1C
FAM187A
EFTUD2
CCDC103
SLC35A3
TAF8
H2BC5
H1-4
NAPG
GFI1B
TSC1
SCAF11
TNFAIP3
MRPS16
DNAJC9
PES1
MAP3K9
FAM104A
C17orf80
RARA
MAT2A
RCBTB2
PRMT3
C7orf26
SYS1
PBLD
HNRNPH3
TP53TG5
EEF1A1
BCL9L
AGK
VARS1
BAK1
MAPK1IP1L
TMEM138
CYB561A3
H1-2
PTPN3
LMNA
SH3BP2
TAF6
MBLAC1
CNPY4
TMEM101
HSPA6
ZNF784
RWDD3
TEKT2
ADPRS
FARSB
FAM104B
RAC3
DCXR
KIF15
KIAA1143
NXF1
IL2RB
TRIM65
MRPL38
THOC1
BUB1B
RMDN3
GCHFR
ARHGAP22
CSAD
ZNF740
ING1
CARS2
SNAI3
WDR11
LYRM4
FARS2
INTS7
DTL
NOL11
MAPKAPK2
C1orf159
RAD52
AP2M1
MRM3
GLOD4
ANGPTL4
WSB2
SREBF1
ITGB5
VSIR
BCAR1
CPT1A
ARID3B
MYLIP
TNPO3
ZNF367
DHRS3
SLC25A20
TOX2
S100A9
PGLYRP4
TAGLN2
RXRA
DKK1
SQSTM1
TINAGL1
ATXN1
SOAT2
IGFBP6
ACTN4
MEAK7
PDE12
VGLL4
TRIOBP
ZMYND8
ACACA
KRT7
DLG4
ACADVL
TES
POLR2E
GPX4
MB
RBM24
COTL1
SPHK2
DBP
CIITA
PEAR1
ANP32C
PEMT
S100A2
DOT1L
FASN
HMGA1
AMOTL2
TSKS
AP2A1
ECH1
MRPS10
ZGPAT
ARFRP1
EFHD2
UQCRHL
TRIM25
FOSL1
SIRT5
TRIM55
NUBP1
TGM2
KLF10
SLC35F6
H3C3
TNFRSF1A
USP32
TRIL
BHLHE40
PHC2
CRY1
NFKBIA
ETFDH
C4orf46
PPP1R15B
EXOC3L4
ERCC1
FHL2
FBXO46
GABRE
WDFY2
SCNN1A
LTBR
RARB
RRN3
LIMS1
TBP
PSMB1
ITGA3
COL23A1
ANXA1
LOC100509620
NOL4L
CCL20
UROS
BCCIP
PLAU
OTUD7B
MGST3
AJUBA
NOL7
CRTC1
C2CD2
SH3BP4
SPEGNB
GMPPA
SEPTIN9
ANGPTL7
TACSTD2
UPP1
RGS3
PLEC
RNF10
COQ5
FRG2C
INSYN2B
MLYCD
LY6K
SCRN2
LRRC46
MYBL2
FAM184A
BCL9
ABCC3
PRKAG2
CAT
MUC5AC
ECI2