Database Description
| General information of database | |
Database name
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TP Atlas
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|---|---|
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Alternative name
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Targeted Proteins Atlas |
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DOI
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10.18908/lsdba.nbdc01161-000 |
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Creator
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Creator Name
Sei Miyamoto
Creator Affiliation
Fujitsu Co., Ltd.
Creator Name
Yasumasa Shigemoto
Creator Affiliation
Fujitsu Co., Ltd.
Creator Name
Takeshi Konno
Creator Affiliation
Fujitsu Co., Ltd.
Creator Name
Hisashi Mizutani
Creator Affiliation
National Institute of Genetics
Creator Name
Takao Iwayanagi
Creator Affiliation
National Institute of Genetics
Creator Name
Hideaki Sugawara *
Creator Affiliation
National Institute of Genetics
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Contact address
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Yata 1111, Mishima, Shizuoka 411-8540, JAPAN Platform for Drug Discovery, Informatics, and Structural Life Science Research Organization of Information and Systems National Institute of Genetics E mail: |
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Database classification
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Metabolic and Signaling Pathways |
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Database description
|
TP Atlas is a comprehensive "Targeted Proteins Research achievements database" in which you can access a variety of information on the target proteins, their structures, published papers and press releases by navigating the network diagram drawn by Cell Illustrator for each TP Research project. It covers all 35 TP projects ranging from signal transduction networks to enzymatic reaction pathways in the three fields of fundamental biology, medicine/pharmacology and food/environment. (Cell Illustrator is a pathway drawing software developed by Prof. Satoru Miyano and his colleagues at the U. Tokyo) |
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Features and manner of utilization of database
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In this database, the background, highlight and outline of each project in "Targeted Proteins Research Program" are summarized. The relationships of proteins or signaling pathways are shown diagrammatically in each project. The diagrams are downloadable. You can also get information of proteins (sequences and structures), genes, and published papers in each project. |
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License
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CC BY-SA Detail |
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Background and funding
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-
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Reference(s)
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Article title
TP Atlas: integration and dissemination of advances in Targeted Proteins Research Program (TPRP)-structural biology project phase II in Japan.
Author name(s)
Iwayanagi T, Miyamoto S, Konno T, Mizutani H, Hirai T, Shigemoto Y, Gojobori T, Sugawara H.
Journal
J Struct Funct Genomics. 2012 Sep;13(3):145-54.
External Links
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| Original website information | |
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Database maintenance site
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National Institute of Genetics, Research Organization of Information and Systems (ROIS) |
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URL of the original website
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http://www.tanpaku.org/tpatlas/index_e.html |
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Operation start date
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2008/04/01 |
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Last update date
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2012/03/31 |
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URL of the portal site
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http://www.tanpaku.org/e_index.php |
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Whole data download
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- |
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Referenced database
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Entry list
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Not available |
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Query search
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Not available |
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Web services
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Not available |
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URL of Web services
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- |
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Need for user registration
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Not available |
