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About This Database

Protein Basic Information

Data description
Data name
Protein Basic Information
DOI
10.18908/lsdba.nbdc01193-001
Description of data contents
Basic information of the target protein. Amino acid sequence, RefSeq ID, etc.
Data file
File name :
sahg_protein.zip
File URL :
File size :
8.1 MB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/sahg_protein#en
Data acquisition method

Retrieved from RefSeq (NCBI Reference Sequence Database). Protein sequence search on EzCatDB (A Database of Enzyme Catalytic Mechanisms), Human Protein Reference Database (HPRD), UniProtKB/Swiss-Prot.

Data analysis method

-

Number of data entries

24,878 entries

Data detail
Data item Description
RefSeqID

RefSeq ID

domainSize

Number of linked Domain Modeling

Link to Domain

(only in SimpleSearch pages) link to Domain Modeling of the same RefSeqID

Link to Complex

(only in SimpleSearch pages) link to Complex Modeling of the same RefSeqID

GeneID

Entrez Gene ID of the gene coding the protein

Definition

Protein name in RefSeq database

chromosome

Chromosome number of the gene

Location

Locus of the gene

Sequence

Amino acid sequence

EC number

Enzyme Commission numbers

EzCatDB

EzCatDB (A Database of Enzyme Catalytic Mechanisms) ID

HPRD

Human Protein Reference Database (HPRD) ID

Swiss-Prot

(only in SimpleSearch pages) link to UniProtKB/Swiss-Prot