[ Japanese | English ]
About This Database

Sequencer table

Data description
Data name
Sequencer table
DOI
10.18908/lsdba.nbdc00191-003
Description of data contents
List of result of BLAST search for the amino acid sequence determined by gas-phase protein sequencer.
Data file
File name :
rpd_sequencer.zip
File URL :
File size :
23 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/rpd_sequencer#en
Data acquisition method

-

Data analysis method

Using the amino acid sequence determined by gas-phase protein sequencer as query, BLAST search was performed to NR database restricted to Oryza sativa. This result was obtained by using NR database at Oct. 2013.

Number of data entries

3,376 entries

Data detail
Data item Description
Spot ID

ID of the spot.

Amino sequence

Amino acid sequence of this spot analysed by protein sequencer.

Homologous Protein Accession No.

Accession No. of homologous protein.

Homologous Protein definition

Definition of homologous protein.

Homologous search identities (%)

Identifies percentage of homologous search.