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About This Database

Linkage order information

Data description
Data name
Linkage order information
DOI
10.18908/lsdba.nbdc00318-02-005
Description of data contents
About the 1174 frame markers of the linkage map, following informations were listed by each chromosome; marker names, genetic distance to the next marker, number of genotyped plants, and genetic types of marker.
Data file
File name :
rgp_gmap98_linkage_order.zip
File URL :
File size :
8.7 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/rgp_gmap98_linkage_order#en
Data acquisition method

-

Data analysis method

Preferred orders of markers with different positions on entire chromosomes were checked by the "ripple" command with window size 5 and an LOD threshold of 2.0.

Number of data entries

1,174 entries

Data detail
Data item Description
Chrom. No.

Chromosome number

Order

Linkage order

Markers

Marker name

Distance

The genetic distance to the next marker (cM)

Genotypes

The genotypical number that was observed per each marker in mapping population.codom : Codominant marker+/- : Dominant marker