Data item | Description |
PSCID |
ID of this data |
Classification |
The six digit numbers (from left to right) are, respectively, 1st: the number of components of motion for the coupled domain motion 2nd: the number for the independent domain motion 3rd: the number for the coupled local motion 4th: the number for the independent local motion 5th: the number of domains exhibiting the burying ligand motion 6th: the number of domains with ligand molecules situated on the protein surface. |
Protein name |
Protein name |
FreeID |
PDB ID of ligand-free form |
BoundID |
PDB ID of ligand-bound form |
Ligands |
Ligand name(PDB) |
EC |
Enzyme commission number |
Distance |
The distance between the active site annotated in Catalytic Site Atlas (CSA) and the ligand-binding sites |
Component No |
Component Number |
Type of motion |
Type of motion |
Ligand binding |
Type of ligand binding |
Type of coupled motion |
Type of coupled motion |
Order-disorder transition |
Whether the open form contains the disordered structure. ("Yes" or space) |
RMSD |
The root-mean-square displacement of a component of motion calculated for the domain motions |
Mean displacement |
The mean displacement of a component of motion calculated for the local motions |
C.C. |
The correlation coefficient between the displacement vector predicted by the linear response theory and the one observed in the crystal structures |
Crystal packing |
Whether the change in the crystal environment is coupled with the structural change. ("Coupled" or space) |
Fixed segment |
Fixed segment |
Moving segment |
Moving segment |
Disorder |
The number of disordered residues |
Helix/coil |
The number of residues exhibiting the alpha-helix to coil transition |
Open state |
Distinction between the open state and the closed state required for examining the influence of the crystal environment |
H-bonds/ligand |
The number of hydrogen-bonds with ligands (observed in the proteins classified in "Buried Ligand") |
H-bonds/water |
The number of hydrogen-bonds with water (observed in the proteins classified in "Buried Ligand") |
H-bonds/protein |
The number of hydrogen-bonds with proteins (observed in the proteins classified in "Buried Ligand") |