[ Japanese | English ]
About This Database

InterProScan Result

Data description
Data name
InterProScan Result
DOI
10.18908/lsdba.nbdc00951-004
Description of data contents
List of the result of InterProScan target the representative EST.
Data file
File name :
kaiko_cdna_interpro.zip
File URL :
File size :
3.1 MB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/kaiko_cdna_interpro#en
Data acquisition method

ORF Table data

Data analysis method

ORFs of the representative ESTs in the clusters were annotated by InterProScan.

Number of data entries

112,731 entries

Data detail
Data item Description
Rep ID

Accession number of the representative EST

ORF Name

Name of ORF

CRC64

Value of CRC64 in each sequence

Length

Sequence length (bp)

Analysis

Database/Program used for analysis

Signature Accession

Signature accession

Signature Description

Signature description

Start location

Start location of Motif

Stop location

Stop location of Motif

Score

E-value of matching score to the functional site sequence

Status

Status of match to the functional site sequence (T: match)

InterPro accession

Assigned InterPro ID

InterPro description

Description of assigned InterPro ID

GO terms

Assigned GO terms