[Terms of service]
[ Japanese | English ]
About This Database

Cluster Table

Data description
Data name
Cluster Table
DOI
10.18908/lsdba.nbdc00951-002
Description of data contents
List of number of identical cDNA sequences that make up cluster.
Data file
File name :
kaiko_cdna_cluster.zip
File URL :
File size :
453 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/kaiko_cdna_cluster#en
Data acquisition method

EST Table data
Data analysis method

The clones those sequences have more than 95% identity each other in a region over 100bp were considered to be the same cluster. Number of clones which belong to each cluster was classified in every cDNA library.
Number of data entries

59,729 entries
Data detail
Data item Description
Rep ID

Accession number of the representative EST of each cluster
Cluster Size

Number of total clones in each cluster
an--

Number of identical clones (cDNA library an--)
bmmt

Number of identical clones (cDNA library bmmt)
bmov

Number of identical clones (cDNA library bmov)
bmte

Number of identical clones (cDNA library bmte)
BmN-

Number of identical clones (cDNA library BmN-)
br--

Number of identical clones (cDNA library br--)
brP-

Number of identical clones (cDNA library brP-)
brS-

Number of identical clones (cDNA library brS-)
caL-

Number of identical clones (cDNA library caL-)
ce--

Number of identical clones (cDNA library ce--)
ceN-

Number of identical clones (cDNA library ceN-)
cesb

Number of identical clones (cDNA library cesb)
dpe-

Number of identical clones (cDNA library dpe-)
e100

Number of identical clones (cDNA library e100)
e4

Number of identical clones (cDNA library e4)
e96h

Number of identical clones (cDNA library e96h)
epM-

Number of identical clones (cDNA library epM-)
epV3

Number of identical clones (cDNA library epV3)
F1mg

Number of identical clones (cDNA library F1mg)
famL

Number of identical clones (cDNA library famL)
fbf

Number of identical clones (cDNA library fbf)
fbm

Number of identical clones (cDNA library fbm)
fbpv

Number of identical clones (cDNA library fbpv)
fbS2

Number of identical clones (cDNA library fbS2)
fcaL

Number of identical clones (cDNA library fcaL)
fcP8

Number of identical clones (cDNA library fcP8)
fe8d

Number of identical clones (cDNA library fe8d)
ffbm

Number of identical clones (cDNA library ffbm)
FJsb

Number of identical clones (cDNA library FJsb)
fmgV

Number of identical clones (cDNA library fmgV)
fner

Number of identical clones (cDNA library fner)
ftes

Number of identical clones (cDNA library ftes)
fufe

Number of identical clones (cDNA library fufe)
fwgP

Number of identical clones (cDNA library fwgP)
heS0

Number of identical clones (cDNA library heS0)
heS3

Number of identical clones (cDNA library heS3)
J150

Number of identical clones (cDNA library J150)
JFsb

Number of identical clones (cDNA library JFsb)
maV3

Number of identical clones (cDNA library maV3)
MFB-

Number of identical clones (cDNA library MFB-)
mg

Number of identical clones (cDNA library mg)
msgV

Number of identical clones (cDNA library msgV)
MSV3

Number of identical clones (cDNA library MSV3)
mxg-

Number of identical clones (cDNA library mxg-)
n

Number of identical clones (cDNA library n)
Nnor

Number of identical clones (cDNA library Nnor)
NRPG

Number of identical clones (cDNA library NRPG)
NV02

Number of identical clones (cDNA library NV02)
NV06

Number of identical clones (cDNA library NV06)
NV12

Number of identical clones (cDNA library NV12)
ovS0

Number of identical clones (cDNA library ovS0)
ovS3

Number of identical clones (cDNA library ovS3)
P5PG

Number of identical clones (cDNA library P5PG)
pg--

Number of identical clones (cDNA library pg--)
phe-

Number of identical clones (cDNA library phe-)
prgv

Number of identical clones (cDNA library prgv)
prW-

Number of identical clones (cDNA library prW-)
ps4M

Number of identical clones (cDNA library ps4M)
psV3

Number of identical clones (cDNA library psV3)
PSV3

Number of identical clones (cDNA library PSV3)
tesS

Number of identical clones (cDNA library tesS)
tesV

Number of identical clones (cDNA library tesV)
vg4M

Number of identical clones (cDNA library vg4M)
wd--

Number of identical clones (cDNA library wd--)
wdV1

Number of identical clones (cDNA library wdV1)
wdV3

Number of identical clones (cDNA library wdV3)
ws0

Number of identical clones (cDNA library ws0)
ws2

Number of identical clones (cDNA library ws2)
ws3

Number of identical clones (cDNA library ws3)
wv4

Number of identical clones (cDNA library wv4)
swa

Number of identical clones (cDNA library swa)
swb

Number of identical clones (cDNA library swb)
swc

Number of identical clones (cDNA library swc)
swd

Number of identical clones (cDNA library swd)
swe

Number of identical clones (cDNA library swe)
swf

Number of identical clones (cDNA library swf)
swg

Number of identical clones (cDNA library swg)
swh

Number of identical clones (cDNA library swh)
swj

Number of identical clones (cDNA library swj)
swk

Number of identical clones (cDNA library swk)
swl

Number of identical clones (cDNA library swl)
swp

Number of identical clones (cDNA library swp)
BmP

Number of identical clones (cDNA library BmP)
L1

Number of identical clones (cDNA library L1)
L2

Number of identical clones (cDNA library L2)
L3

Number of identical clones (cDNA library L3)
L4

Number of identical clones (cDNA library L4)
L5

Number of identical clones (cDNA library L5)
L6

Number of identical clones (cDNA library L6)
L7

Number of identical clones (cDNA library L7)
L8

Number of identical clones (cDNA library L8)
L9

Number of identical clones (cDNA library L9)
L10

Number of identical clones (cDNA library L10)
L11

Number of identical clones (cDNA library L11)
L12

Number of identical clones (cDNA library L12)
L13

Number of identical clones (cDNA library L13)
L14

Number of identical clones (cDNA library L14)
L15

Number of identical clones (cDNA library L15)
L16

Number of identical clones (cDNA library L16)
Other

Number of identical clones (other cDNA libraries)