ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX873813 | Keratinocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◣ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
MTRNR2L1
MTRNR2L9
GTPBP6
SPAAR
CNOT3
MTRNR2L10
SLC35E2B
EMILIN2
MVK
SLC35E2A
DUX4
TLE3
FRG2
EPN1
MAMDC2
MTRNR2L6
PDE4A
TAOK3
SUDS3
ZNF300
CDON
RPL9
LIAS
UCKL1
FAM71E1
EMC10
LGR6
HDAC2
USP17L8
USP17L3
ENTPD2
NPDC1
BZW2
ANKMY2
RANBP2
TARDBP
C1orf198
ATXN2L
SCGB1C2
CRYAA
CRYAA2
RBM23
CCDC200
SP2
FAM187A
EFTUD2
CCDC103
FUS
OPRL1
EED
FOXJ3
VPS37B
COMMD1
CCT4
HOMER1
OPA3
UQCRC2
PSMD1
FAM53C
CDC25C
RALGAPA1
UFSP2
C4orf47
PAK1
TMEM260
HES4
STK19
DXO
OXSR1
PDXDC1
YY1AP1
DAP3
WRAP53
TP53
PPP5D1
CALM3
CENPN
OSGEP
APEX1
TMEM259
CNN2
PIK3R3
STK38L
JOSD2
ASPDH
SMC2
EIF3B
DCTN1
ATP1B3
RBKS
BABAM2
ZNF547
TRAPPC2B
RFX1
ELL2
ZNF576
IRGQ
NUP205
RPL35A
NVL
IQCG
POLR3F
DZANK1
C19orf48
FRAT1
GNB2
PNO1
C6orf62
GIT2
ANKRD13A
FLCN
OGA
PSIP1
NPAS4
AGAP2
GOSR2
TSPAN31
HADHB
HADHA
RHBDD3
EWSR1
ICE1
ATP5MG
ZBTB21
HECA
NOL8
CENPP
UROS
BCCIP
TCP11L2
UBB
TIMM22
TMED1
HINT3
PHRF1
STX4
FEM1A
TBCK
AIMP1
TMUB2
FAM227A
CBY1
TRMO
IQCH
AAGAB
RPS23
ATP6AP1L
UPF2
CSNK2A1
PLCD3
ACBD4
GBA
EIF4A3
TAF15
ZRANB2
SLC35B1
CACTIN
PFDN4
PTDSS1
MTERF3
NUP85
PRMT1
SELENOW
STAM
GARS1
STK35
USP36
TPBG
CENPE
RPL21
KCNJ15
RAB11B
SOST
PKNOX1
IPO13
DHX8
GRIPAP1
C21orf91
PMVK
FOS
ULK4
DNMT1
RPL19
CACNB1
ING3
PDAP1
BUD31
TBC1D17
AKT1S1
MRFAP1
LRPPRC
UBE2B
CDKL3
NR6A1
PRKCI
BRAF
CDIPT
PFDN2
NIT1
CD24
SS18
SRI
MTMR14
BCL6
TSNAX
DHX36
NDUFA4
BAG6
APOM
RRNAD1
ISG20L2
BCAS2
METTL26
NCOA7
POLR3E
PRMT5
HGC6.3
PGK1
SACM1L
H4C8
LTA4H
PSMA3
TIA1
ZNF839
LUC7L2
BRMS1
B4GAT1
BCAR3
RNASE4
ANG
POLG
SHF
HSPA6
GSTA4
FMC1-LUC7L2
FMC1
PMF1-BGLAP
PMF1
CPNE7
ADCK5
PPP6R3
BRD3OS
FBXO31
TRIM7
DPP9
WFIKKN1
MVD
SSBP2
KNL1
IFITM10
FRG2C
PCGF2
ILF2
VCX
RPS29
C8orf37
PLXDC1
UNKL
RAB11A
SLC19A1
KHSRP
PYDC1
ZHX3
PFKP
ZBTB37
LRTM1
HES7
ALOXE3
GLIPR1L2
BAIAP2L1
OSGIN1
SPATC1L
HEXIM1
EEF1A1
GFI1B
CCDC115
CCDC57
LRRC6
NDUFS7
CRHR2
BORCS6
GCNT3
CXXC5
ELSPBP1
BSPH1
MAFK
BTBD2
DCT
RAD23B
ANO7
STXBP1
SBNO1
CUL3
TP73
PHACTR3
TTC16
PTRH1
YJEFN3
CILP2
RGS9
HMGN4
OR1F1
FBRS
SPI1
PBX2
GPSM3
ULK1
HDDC2
SPOP
C11orf95
FST
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
TMEM86B
PRR29
UBE2L5
CIB3
USF3
GH1
ABR
CAPN12
COLEC10
APOA1
SCYL3
GOLPH3
H3-3B
IQUB
ZCWPW1
MEPCE
VGLL4
PRELP
NAPRT
MROH6
CMKLR1
KASH5
CCDC107
JRK
ESRP1
FZD8
VCX2
RAB6A
CACNG4
COTL1
SMARCD3
CCDC7
KCTD9
CDCA2
SETDB1
TOR4A
SLC29A4
KLK14
SPRING1
RNFT2
MRPL58
CDK18
ZNF605
JARID2
MFNG
LARP1
MRC2
CLDN34
FAM240C
CALY
AFG1L
SMG7
FRMD6
AHRR
LY6E
SMARCC2
CDH11
TNFRSF6B
THSD4
INTS1
UBE3C
CACNG6
SYNGAP1
LOC101928841
CUTA
PHLDB3
VLDLR
CORO2A
AK1
IL17RE
LPCAT4
MSRB2
ATXN7
TRIB1
MYL12B
SUZ12
FIBCD1
KLK4
LKAAEAR1
ZNF512B
ARF3
CLN3
C10orf67
APOBR
PI16
GPIHBP1
SPEF1
CENPB
CDC25B
AGXT
TNNI3
MAP1B
NPRL3
MYADML2
OR10H1
KDELR1
GRIN2D
C1QTNF12
SLC7A2
EFNA2
PELI3
LRRN3
MTMR4
VCX3B
BDKRB1
PRR12
USP34
SLURP2
WBP4
TLCD1
NEK8
ELF1
PAXBP1
BIRC7
PPP1R21
C17orf58
SPIRE2
MTRF1
EYS
PPP1R13L
POLR1G
P2RX1
MZF1
DSTN
BFSP1
SIGIRR
USP38
SLC8A2
CD164
KNDC1
PHF21A
UGGT1
RASSF2
LCN12
ZNF524
PRTG
FIZ1
ADAP1
APOH
CBLC
CMBL
RNF43
PCNX1
SP3
KCTD13
FGF12
NOS3
TMEM65
JPH4
TTYH3
RASA4B
DRC7
C17orf64
RSF1
AAMDC
TUBA1C
RECQL4
MFSD3
LRRC14
VCX3A
MECOM
LARGE1
ALKAL2
CABP2
TLK1
OTOF
MINAR1
ARFGEF2
ARL6IP4
SLC6A18
BCAS3
CATSPERG
SNAPC4
CAP2
TFEB
POLK
CERT1
SLC43A2
USP32
IGLON5
CREM
RASA4
CADM4
MLXIPL
C16orf72
MAML3
HECW2
CCDC8
BRPF1
LASP1
DACT3
ACTR3
MEAK7
NIM1K
NAV1
DNAJB8
URGCP-MRPS24
URGCP
APPBP2
TSC2
NTHL1
FOXJ2
CDC42EP5
BCAM
EFCAB2
IQCE
BRAT1
ADNP
MSI2
CLTC
ESRRG
LHFPL2
UGT1A3
RAMP3
CACNA1S
ASCL5
SIPA1L2
TMEM18
POU2F1
GREB1
SMURF1
ITPR1
FOXA2
SPACA6
SP1
DDI2
SLC13A3
INTS9
HMBOX1
NAP1L5
ECH1
CST3
AMMECR1
RCAN3
CTCFL
NKX2-1
CPLX2
ZFP41
MYADM
MFRP
C1QTNF5
KCNC3
PUDP
SATB2
NEMF
CDH22
ZNF148
KCNQ2
PALLD
CHRNA4
PCBP2
PHF23
GABARAP
DVL2
LOXL3
DOK1
VNN2
TMEM40
KLK7
RPH3A
PRDM11
LCN6
CWC25
OCLN
ABI1
PITPNM3
NPEPPS
TMEM63C
DHX34
ACTRT2
EOLA1
OR10H5
SRSF9
DYNLL1
NIBAN2
TSHZ3
FBXL19
PI4KB
MMP15
MED6
LHX6
ITIH5
RASSF5
CA4
MDM4
DYNC2I1
TXNIP
GPR78
SNX16
HTR1F
PLCXD1
LMTK3
IQSEC3
DYNLL2
PLXDC2
NPR1
AHCYL2
SERPINA3
HS3ST2
ZNF205
MLLT10
IL26
RRM1
LRGUK
PLCB1
KLHL23
TAF6L
HERC4
ATP1A3
CREBRF
FOXK1
CNPY1
LRRN2
LMNB1
CMIP
ARID2
BRD2
BBX
GTF2H4
NR5A2
PRSS27
RS1
PPEF1
CCDC112
GOLGA6L10
FBXO11
MTRNR2L4
SMG1
SIGLEC15
NPAS3
BCAT2
KRT8
ADAMTS9
VILL
ZFR
PPM1D
GNAS
TSC22D1
SKA2
PRR11
NGB
CA11
LHX9
BRIP1
PDXK
PPP1R3E
BCL2L2-PABPN1
BCL2L2
HDHD3
GAB2
FAM234B
LAMC1
CANT1
DPH1
RNF19A
HMGB4
MRGPRE
ERICH6
ARC
BCAP31
ABCD1
ZNF131
MAP2K2
SBK2
ATXN1
TMEM187
HCFC1
RALY
KCNK15
CROCC
PTPRH
LMBRD1
KMT2E
WBP1L
TMEM170A
LRATD2
KCNN4
TMCO3
PRPF40B
DCUN1D2
ANKLE2
FAM71E2
TRA2A
PRPF40A
ORAI2
ARL6IP6
HSP90AA1
ZBTB4
SLC35G6
POLR2A
PABPC1
MSRB3
HSD17B14
HMGN1
CYP24A1
RARG
PHF2
AAAS
DYNC1LI2
OSR2
HOXC11
AMZ2
STX6
RNF139
GRHL3
CPVL
CHN2
GNG8
CCDC149
PRKCZ
PPP2R5C
EDN1
N4BP3
KRT23
GZMM
MEF2C
BARHL1
TMEM190
STAT6
IL11
ATF7-NPFF
ATF7
MADD
CRY1
ATXN7L1
SCYL2
OXR1
DEPDC4
GOLGA6L4
COMMD3-BMI1
COMMD3
BMI1
KLHL26
KCNIP2
FGD3
BCL11B
ZNF219
TMEM253
GRP
FBXO34
NSUN4
FOXQ1
RNASEH2C
MRPL38
TLCD3B
MAPKAPK5
CALHM2
TAF7L
CDC14B
TMEM271
CDKN3
TMEM126A
TCL1B
WDR26
TSHZ2
TMEM30A
SOCS2
NCOA3
GTF2IRD1
CCDC59
INSM1
FAM104A
XG
SLC25A19
IL17D
RIMS2
CYP3A5
KLHDC10
KCNB1
EIF4ENIF1
CCK
UNC80
SSH1
S100A16
PTGIS
PPP1R16A
KIF6
FOXH1
ATP4A
SPRY3
SHOX2
RSRC1
SEC13
KRT82
TSPAN32
ID2
HSPA1L
HSPA1A
GOLGA6L3
C11orf21
APCDD1
GDF6
CGN
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
LTBP4
GRIK5
GABBR1
UBTD2
RIPOR3
NFAM1
MTOR
GJA1
ZFP36
TASP1
MED23
IRX6
FKBP1A
EFS
E2F3
SEZ6L2
SCAF1
RRAS
RBM27
ASPHD1
DDX59
CAMK2D
AJM1
TNKS1BP1
SCRT1
LSP1
LOC105378979
BTBD18
ADAMTSL4
ZEB1
PHF7
CYP4F11
BAP1
KLF10
PRAC2
PRAC1
KSR2
GATAD2B
COL6A1
CXADR
ORC4
NPC2
MBD5
ISCA2
DPEP1
MAGED4B
MAGED4
KRT80
GSC
TRAPPC2L
SGCA
GALNS
FKBP5
EDN3
DGKH
ARMC12
TM4SF1
CPNE6
NTNG1
GPR45
HSD3B7
TRIM8
KLK6
DNAJC27
ZNF384
TFAP2A
PDZD3
KCNH3
DENR
DOK5
STX16
LENG9
COL20A1
APTX
PLEKHG2
PDE1B
TTLL10
SERPINI1
ROCK2
PDCD10
CYTH1
AGR3
WNK1
PERM1
IREB2
DCAF5
MARCHF6
HRAS
TRH
RUNX1T1
ARRDC4
SDC2
FLNA
FAM214A
TNPO3
SYNCRIP
MIR1-1HG
HSPE1-MOB4
HSPE1
HSPD1
HROB
ANP32B
SETD5
PRSS8
GET4
PAN3
TAS2R16
NUCKS1
MYOZ3
GABPB2
TECPR1
LHX4
MUC3A
LIN7A
BCL9
TMC4