ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
ISG15
HES4
NSMCE1
MIA2
CCL20
SEPTIN4
MTRNR2L8
CRYBG2
ACSL5
MORC1
URGCP-MRPS24
URGCP
SKIV2L
NELFE
LENG8
ARHGEF39
SIT1
CCDC107
MIDEAS
PHF12
POLR1E
ITPRIPL2
NEK2
EPS8L2
DEAF1
NCS1
UQCRHL
NR1I3
B3GLCT
LIMK2
NFE2L3
ATXN7L1
DPAGT1
C2CD2L
ADAMTS6
FAM169A
CLCF1
SLC3A2
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
NDUFS1
EEF1B2
CAB39
CDHR2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
C11orf86
POLR2E
GPX4
C19orf33
CSTF1
AURKA
SEC24D
PCNX3
MAP3K11
PPP2CB
MRPL24
HDGF
SLC20A1
CYP17A1
CHST11
SIAH2
SEC13
LOC390877
GTF2F1
SPON1
ACAA2
GNAZ
ADAMTS14
KDM6B
FAM110B
SLC27A5
PECAM1
SPAAR
HRCT1
SLC9A3R1
ITPK1
PLXNB2
ERICH3
MTRNR2L2
MSH3
DHFR
TIGD3
HMOX1
RAPGEF1
ABCC3
ARL14
EXOC1
SLC41A2
SNTB2
MUS81
CFL1
FCHO2
PDLIM2
RGS3
SFRP5
AP1AR
IRX4
MYC
PRKAG2
PLAUR
CAMK2G
LOC100509620
KIF5C
CREB3L3
PAAF1
COA4
S100A16
S100A14
KIZ
KPNA7
INAVA
FHL2
CD163
SCARB1
PLOD1
KIAA2013
SMAD3
PEMT
ITGA3
PTP4A1
PLA2G7
ANKRD66
RAB17
TDP2
ACOT13
PHC2
ERBB3
PLA2G2E
B3GNT3
GDF15
IRF2BP2
PRAG1
GNAL
CHMP1B
SERINC2
TM4SF1
INTS4
CCDC90B
IDNK
GNB1
TSPAN8
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
MRPS10
ABHD12B
RNF44
ROCK2
SFTPC
BMP1
SYT12
ZFP36
PLEKHG2
POLD4
SLC15A1
GDA
HRH2
SPG7
TOB2
CDC14B
LASP1
POR
RNGTT
IL20RB
KIF4B
PCBP1
ID1
FUT5
PRKCD
C19orf12
AGPAT2
TEX45
PEX11G
XPNPEP1
IL4R
STN1
RCOR2
CPLX2
SMIM29
HMGA1
WSB2
CITED2
SCGB1A1
ZNF764
TJP3
SGIP1
MARK3
ADRA1B
USP37
CNOT9
ENDOD1
ZNF592
PRR15L
PGAP3
ERBB2
KATNAL2
TULP2
NUCB1
RBKS
BABAM2
ARHGAP27
TMEM270
MTFMT
SNAI3
C1QTNF1
DHRS3
EHD1
TNFRSF10B
ABLIM1
LOC102723996
ICOSLG
MIDN
CBARP
ATP5F1D
PAX2
PIM3
DNAJC25-GNG10
DNAJC25
DYRK1A
TINAGL1
SBNO2
PLIN1
PEX11A
TMEM214
SPTBN4
ROMO1
NFS1
TLCD4-RWDD3
TLCD4
BAAT
SLC38A10
AKR1A1
TAB2
SHTN1
INPP5J
OXCT2
EDN2
UBE2R2
ZC3H12D
SH3D21
GUCA2A
FAM107B
ARNT
KMT5A
PPP1R12B
UBE2T
CRYGS
PLK2
RAD50
CCDC71
DOCK5
NCKAP5
MBD3
SH3D19
CD86
MTA2
ROM1
EML3
CA9
USP2
TMEM183A
IST1
IGFBP4
ETS2
CD109
SECTM1
PFKP
RPS3A
PC
GPA33
MAP4K5
ATL1
SMIM19
SLC20A2
DYSF
ZFAND3
CORO2B
GPR171
BRD4
TMEM184C
BLVRB
DUX4
PHOSPHO1
MEAK7
GAB1
PTPRF
STAP2
MPND
NKPD1
ALDH2
ALDH3A1
ZNF696
GOLGA4
LIPH
PRMT2
LPAR2
GMIP
KHK
LARGE2
LBP
CENPVL2
CENPVL1
KRTAP5-7
MICAL2
RASSF5
NGRN
KNL1
CEP152
TMEM275
MTRNR2L1
TOGARAM1
KLHL28
SLC39A6
RIPK4
EDEM1
RNF43
CUX1
ERCC6L
AMIGO1
ZNF219
TMEM253
MTMR4
MYO1E
TRIM55
LMTK3
NQO2
AFF1
PABPN1
GJB1
SNN
MID1
LHB
CGB3
PCGF1
LBX2
MYD88
ACAA1
C2CD2
ITGB6
DUSP5
SESTD1
IGF2BP3
RASSF2
PTGER2
ATE1
ELL
ZNF564
RNF217
METTL7B
BORCS7
DENND5B
CA13
CTSO
SH2D5
ZSWIM7
TTC19
C10orf90
SLCO4A1
SEC23A
SLC35F6
RARA
PIP5K1C
KLK8
KLK7
PLCXD2
TMEM171
TMEM169
PECR
PHETA1
PRDM10
MPI
TBC1D10A
BPHL
SH3BP5L
CORO1C
PLEKHG3
FBXO46
SKIDA1
MLLT10
RRAS2
TTC31
CCDC142
RBP2
LEKR1
NT5C
PRUNE1
MINDY1
CREBRF
PPP1R35
DIS3L
E2F2
CDH17
ALDH3A2
SDC1
PPP1R27
MCRIP1
ARPIN-AP3S2
ARPIN
VGLL4
IQGAP2
SPDYE14
SPDYE10P
GNRH1
MVP
UBTF
RHOC
OCIAD2
DYNC2I1
SGO1
EPS8
INPP1
PCYT1A
DENND1B
SPINT2
PPP1R14A
RGPD2
RGPD1
SELENOP
SLC19A3
TRIM2
SLC7A5
PDE11A
MTMR11
RUSF1
WDR1
MYOG
COPZ1
VTN
SEBOX
SARM1
PDGFB
MGST2
TMEM101
RAB8A
PYY
NAGS
CFLAR
ABCA10
FUOM
PRAP1
MIA3
MRPS11
MRPL46
SF1
MMP20
ANKRD35
TRAPPC4
SLC37A4
RPS25
IDH2
SLC27A4
BCL9L
NUPR2
CHCHD2
CERS2
TACR2
IGSF23
BIRC2
NRCAM
WDR27
C6orf120
GSTM5
TESK2
MMACHC
CCDC163
MLF2
NPTXR
RCOR1
PRR7
BAZ1B
KLKB1
LAMP3
FMNL1
SIRT7
ADI1
MAFG
NR1D1
JUND
IQCN
DCLK1
TREX1
SHISA5
SERPINB1
PIKFYVE
IL6ST
SPHK2
DBP
PRR3
GNL1
SCAF11
MRPL48
OLFML2A
NR6A1
HOXA4
HOXA3
HOXA5
BEND7
KDM4B
AHCY
CLASP1
PLAAT3
HIPK4
NEDD4L
NUDCD1
UCP3
RGS9
PNPLA1
ATG16L1
CLDN4
TMEM141
METTL27
P4HB
ARHGDIA
KRT86
LIPK
RNF223
MIIP
IFRD1
CDK5R1
SRSF11
LRRC40
TRMT11
DOT1L
ANO1
FAM78B
GUCA1B
SLC25A5
HKDC1
GPR137
C11orf24
MAD2L2
FBXO6
RSPH10B2
RSPH10B
ANXA2
TDRD1
CCDC186
ZNF653
CD2BP2
FAM3C
OAF
IL32
POLRMT
FGF22
CTSE
DHRS7B
EPS8L3
TAF6
MBLAC1
CNPY4
RFFL
KLF6
IRAG1
APOC3
APOA1
SF3A2
PLEKHJ1
SPTBN1
RPL23A
RAB34
PROCA1
TLCD1
LGALS4
APBA2
HERC5
SLCO2B1
EEPD1
CTBP2
RBIS
MXD3
RAB24
PRELID1
TTI2
GFM1
UNC93B1
ALDH3B1
FAM185A
TMEM120A
ZER1
UVSSA
PLAA
IFT74
COPS4
DAND5
IVD
YPEL1
MBNL2
PLEC
PERP
ADAM22
CYP1A1
BLVRA
STRA6
MOV10L1
SH3BGRL2
EDN1
HSDL1
DNAAF1
TIRAP
GPN2
CEBPA
MTFR2
DNAJC22
RAB43
LAX1
DKK4
ALDH4A1
PYCARD
DMBX1
SP1
GRID1
SHPK
CTNS
VWA7
EMP1
AHSP
KLRC3
SEMA5B
GNPDA1
DSP
MSLN
NIBAN2
SMYD5
MAST2
CRPPA
C5AR1
C10orf105
MSANTD2
ESAM
STAT6
PTS
MKNK2
LY75-CD302
LY75
TNS3
SOD2
SLC25A28
SMARCA4
PPP1R9B
GCNT1
PPM1D
TSC22D1
TRIB3
RBM14-RBM4
RBM14
CDC42EP4
DSG2
C2orf88
PYGL
TMEM71
PHF20L1
ZNF77
ASB2
MAPK7
TAF12
CHI3L1
MYBPH
MFAP4
GLTP
UBE2L3
PDXP
TEX33
H3-3B
UNK
DCBLD2
GPR183
RXRA
PTPN23
RABGGTB
TANK
ZC3HAV1
NOS1AP
GADD45A
BEST3
FHDC1
MLEC
SCYL3
ARHGAP32
IDH1
CERK
RBFOX2
KRT18
IRAK2
TEAD4
INTS9
HMBOX1
APOL4
YARS1
S100PBP
LDHA
TBC1D23
SOWAHA
GLRX
UBR4
TKFC
DDB1
C1orf174
SPATA18
SGCB
B3GAT3
PANK1
TRIM14
SERP2
DKK1
NEIL1
AMN1
TPD52
CDK11A
TAL2
PPP1R15B
NNAT
BLCAP
SMARCD2
NMD3
CSNK1D
PGLYRP2
PACSIN2
NOSTRIN
SQSTM1
ZC3H10
RPL41
MGAT4B
ARTN
VPS9D1
LIPE
NET1
CPHXL
ASAP2
CDC6
TSPAN15
TUBAL3
CBY3
RCAN1
AANAT
UBE2O
SFXN3
PDZD7
TECTB
CEBPG
HPS5
GTF2H1
RNF10
COQ5
SOS1
PLXDC1
NCSTN
COPA
PEPD
PTK7
PRSS8
TNFRSF1A
CLRN3
PRSS36
INTS7
DTL
CIBAR2
ISL2
GLRX2
CDC73
MRPS30
PRND
LSM1
BAG4
WDR81
TLCD2
ELF5
ANXA11
APOBEC1
ATP1A4
ERICH4
DMAC2
FIGNL1
PAF1
TRIM15
TRIM10
SULT2B1
RPL34
MFSD3
GPT
UGDH
TBP
PSMB1
ZDHHC8
NECTIN1
PRSS41
CSNK1A1
TTI1
RPRD1B
PLIN3
KIF21B
TCTEX1D4
PLK3
BTBD19
NFE2
HNRNPA1
CBX5
EGLN1
ATRN
AGTRAP
GABARAPL1
TTC36
TMEM25
ZNF512B
BCAM
UFL1
KRT19
STK33
INSC
DRP2
HNMT
PPIP5K2
GIN1
MSH5
DDAH2
CLIC1
CDKN1A
AFAP1
LOC389199
BAK1
NPDC1
ENTPD2
DCUN1D1
U2SURP
PNPLA2
KIAA1549L
SSTR5
CRACR2B
CIDEC
ADAR
ZNF395
INF2
SEMA3B
NFKBIA
LSMEM2
LAMC2
WDR77
ATP5PB
SMG9
SPAG4
LRRC1
PITPNM1
NUBP1
PRMT1
IRF3
BCL2L12
POMGNT1
LURAP1
PDGFRL
GFOD2
LRP1
SELENOI
ADGRF3
ETV4
CMPK1
EREG
ARSA
RPL13
HSPE1-MOB4
HSPE1
HSPD1
TMEM254
SPAG8
HINT2
CDC25A
KRT39
YAP1
LIM2
SFR1
PHACTR4
RNF5
AGPAT1
AGER
ADGRB1
MRPL2
KLC4
CUL7
SLC2A9
UBALD2
HCN3
GRAMD4
PRKAR1A
TBCA
HMX3
CLK2
ACOX2
CASTOR2
THRA
CHMP4B
ACSL1
ZNF326
FKBP1A
DEFB123
AWAT1
MYPN
SELPLG
PMVK
PATZ1
CNOT2
KLRC2
MYRF
DHRS11
RSPH3
ARHGAP29
LINS1
ASB7
PARP4
TPCN2
BLOC1S5
BRCA1
CAPN2
TADA2A
ACACA
IER5L
TGFBR2
TMEM120B
NAE1
QRFPR
PPM1J
C6orf132
NFXL1
ERI1
HDHD5
FDXACB1
C11orf1
ALG9
CCND2
RPS15
LAMB2
CLNS1A
ARHGAP45
GALE
ALKBH7
PSPN
TMPRSS9
GIMAP4
GATAD1
RAB30
SP6
RUNDC3A
FRG2
BEGAIN
RPRD2
ZBTB47
GCLC
TIMMDC1
NFIB
LAIR2
SLF1
KIAA0825
MAPK8
MICAL1
ALOX12B
MLXIPL
SLC38A3
INSR
NFE2L1
CYP26B1
PPIH
ECI2
NPY
H2BC18
LOC100131107
USH1G
OTOP2
UBLCP1
ABCC2
OXR1
ITGB5
ACIN1
LMLN2
C14orf119
RPE65
GAL3ST1
HPCAL1
KIF16B
ZP3
SRSF4
LPIN1
TAGLN2
SYTL2
P2RY4
KLHL29
TRIM6-TRIM34
TRIM6
TRAF6
RAG1
VPS54
H1-0
GCAT
FGF23
NCMAP
LHFPL2