ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX361882 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◣ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

TMEM177
ECHS1
PPIL2
ORC2
ALOX12B
SLC35A3
KIF21A
ATXN7L1
HNF1A
ERBB3
ISG15
HES4
SLC7A7
UQCRHL
MIA2
ADCY6
GSTK1
GPR35
OR9Q2
RELB
TNS3
RAMP1
ALDH2
ETFA
AFF1
LURAP1L
TACR2
SELENOP
CCDC90B
INAVA
PRKCSH
CCDC151
GPA33
CDC14B
ZFAND3
TMEM45B
CLIP2
PRSS3
PTPRN2
HMGCS1
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
IST1
RASA4
YEATS4
EPS8
SKIV2L
NELFE
MYRF
NADK2
STK24
MAMDC2
TREX1
SHISA5
DNAJC22
DENND5B
KNL1
PGAP3
ERBB2
PNMT
PHACTR4
VIPR1
PCNX3
MAP3K11
RMDN3
GCHFR
C15orf62
RBKS
BABAM2
DNAJC25-GNG10
DNAJC25
SP1
SERPINB1
TSPAN3
RPS5
PCGF1
LBX2
VIL1
SMAGP
FMN1
AQP11
COLCA2
MYL12B
MYL12A
MYO1A
NPTN
CBX4
DYRK2
ZNF384
TATDN3
NSL1
BIRC2
MICAL2
NSMCE1
RASA4B
RAB17
TNRC18
LOC100129484
PAK4
RAB43
SPPL2B
LSM7
MAN2C1
ART1
ATE1
GAB2
TTC31
CCDC142
MRPL53
C9orf64
CNNM3
IRF2BP2
ADAP1
SPON1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
MARK2
LTV1
MNAT1
LAMTOR5
GGT1
CAB39
LOC102724770
DGCR6
LRRC1
KLHL8
SPINT2
MAGI3
INTS8
OSBP
COL8A1
ACY3
EPS8L2
DEAF1
PHETA1
TCAF1
BNIP5
MMP24OS
MMP24-AS1-EDEM2
FAM83C
KIAA0100
CLRN3
ZNF564
PTPA
CRAT
CAPN3
TNIP2
METTL7B
TESK2
MMACHC
CCDC163
TYMP
SCO2
ODF3B
S100Z
TMCO1
COL23A1
RAD54L
ITPK1
TNFRSF1A
ADAMTS6
SLCO2B1
CPPED1
HSD17B11
CCL20
REG4
ZNF385B
GOLPH3
DOCK6
CACNB2
WDR97
MAF1
CYC1
ATXN2
POLRMT
FGF22
PRR15L
BAIAP2L2
CDK5RAP3
SULT2B1
CCDC71
ZSWIM1
SPATA25
NEURL2
CTSA
RAB37
AGMAT
CYB5R3
ATP5MGL
KLHDC8A
HPS6
ARMH3
KDM6B
LRIG3
PKDCC
TECR
DNAJB1
TPCN1
COBL
ZNF827
HOXA4
HOXA3
DUX4
LINS1
ASB7
FAM131B
ARHGAP27
PAAF1
COA4
C1GALT1
ZMIZ1
BRMS1
B4GAT1
SEC16B
WDFY2
HEPH
C1QTNF1
GIPC2
PHC2
FNIP1
LTBP1
CCN2
PER2
MLEC
METTL8
DCAF17
BTNL8
EPS8L3
PAK1
CXADR
SLC17A5
PCDH1
MAP4K5
ATL1
DMXL2
LIMK2
SYBU
MTA3
LARP1
ASAP2
RUNX1
KCTD17
CLDN7
PTGDR2
ELP5
CTDNEP1
C1orf210
PRKG2
CRYBG2
CDC34
SPTBN4
HOXC10
HOXC11
TAS2R19
AEN
ZNF219
TMEM253
GNA11
PLEKHG5
THBS4
MTX3
TPMT
KDM1B
SUPT7L
SLC4A1AP
NCR3LG1
KRTAP5-7
MBNL2
BCL3
LSM5
AVL9
PERP
CTCFL
C3orf85
CPNE5
TMPRSS9
ABLIM1
ZNF408
ARHGAP1
PHRF1
RNF10
COQ5
CDH17
MPV17L2
LRP6
PPIP5K1
XPR1
CKMT1B
CDK3
PLAUR
TNFSF15
ADD3
GRTP1
LARGE2
PEX16
TFDP2
NUMB
C2orf88
C1orf174
TANK
NUDCD1
HNF4A
KDM3A
TSEN2
ISCA1
TRIM15
TRIM10
PPP4C
PDZK1IP1
LMO7
UBC
ABCB1
SOS1
CDKN2AIP
KALRN
XPC
LSM3
TSPAN14
SLCO4A1
PROCR
CLDN4
TP53I3
SF3B6
FAM228B
MYO7B
IWS1
MIDEAS
RAPGEF1
PDGFB
RHOC
NDUFA6
PTK2B
TRIM35
FOXJ3
CAMK2G
HSPE1-MOB4
HSPE1
HSPD1
IRX4
L3HYPDH
JKAMP
NR1D1
SRSF11
LRRC40
SPATS2L
TMIGD1
AGBL3
CENPS-CORT
CENPS
SENP1
PFKM
SASH1
CSNK1D
GDA
PPM1J
KLHL31
IL20RB
RSBN1L
CTXN3
TEX45
PEX11G
SPATA18
DTX2
UHRF1BP1L
SGCB
MTRNR2L2
MSH3
DHFR
PINK1
KLHDC2
RNF126
FSTL3
UQCRC1
TMEM89
WDR38
RPL35
ARPC5L
TCF12
AGPAT2
FGFR3
IGSF23
CD2BP2
IGF2BP3
ANKRD40CL
PTBP1
PHF7
BAP1
IGF2BP2
KRT19
CALCOCO1
KRT15
SCARB1
PKP2
TPRG1L
CXCL2
SMAD3
MGST2
DCAF8L1
PICALM
GALNT11
FGF3
SEMA6D
ZFP36
PLEKHG2
CHN2
UROC1
CHST13
DST
TRIM63
DGKZ
PRKAG2
VTA1
NMBR
TOR1B
IDH1
EHD1
DNAAF2
GNAL
CHMP1B
SDHAF1
TMEM54
MIIP
TNPO3
AJUBA
ZNF764
FAM107B
SMYD5
HGD
GAL3ST1
MRPL40
HIRA
SEMA3C
PDXP
ARL14
ANK3
CALM2
PKP4
CCDC148
PRUNE1
MINDY1
HADHB
HADHA
OPA3
CSNK1A1
PRELID3B
ZDHHC3
EXOSC7
PSMA5
FTH1
PET117
KAT14
TMBIM1
TTI1
RPRD1B
TLX1
TM4SF1
HDHD3
HAUS4
PLEKHG1
TIA1
PCYOX1
ARNTL
SPRY2
TPD52
ZNF687
MROH6
NAPRT
MOGAT3
TM4SF5
DOLPP1
SLC1A1
TSPAN8
AHCY
CDR2
NAPEPLD
SMIM35
MICALCL
TMPRSS4
FGF9
WSB2
PGF
ABR
TMEM141
ASB4
PFDN5
MYG1
RASGEF1B
INPP1
WT1
SLC16A14
TES
PIWIL1
MEGF9
LRRC4B
CD36
MMADHC
ENGASE
ZADH2
TSHZ1
NDUFS1
EEF1B2
TSC22D1
RBIS
GSTA3
FRG2
SFRP4
EPDR1
C4BPB
PSME3IP1
VASP
RSPRY1
TMPRSS2
VANGL1
DTX4
TCAF2
PPP5D1
CALM3
PEPD
TMEM150A
RNF181
USP39
C2orf68
PKD1L1
PEF1
PROS1
ARL13B
PDE8A
FEM1A
SECISBP2
ZNF775
CKS2
REPIN1
USF3
MORC1
MGAT5
GTF2IRD2B
POLD4
RAB5C
TINAGL1
SDSL
URGCP-MRPS24
URGCP
ATP5IF1
RIPK4
SEC23A
TJP3
FITM2
ZNF214
NLRP14
ZC3H4
OCIAD2
NHSL1
ASAH2
CRPPA
CSTF1
AURKA
UBA5
ACAD11
AMN
SPTBN2
CCDC59
NPNT
JPH2
YAE1
SEPSECS
SYNGR4
AK3
MPP5
PRKCD
PITX3
GBF1
RRN3
OR10H5
PITPNM3
EIF2AK2
CARHSP1
KLF5
AHCYL2
GDPGP1
CIB1
PPM1D
CASKIN1
PGP
MLST8
BRICD5
TLE3
PTP4A1
C12orf43
MIEN1
GRB7
MDM2
SLC46A3
NADK
HDAC7
VPS41
SMPDL3A
SDC1
CLASP1
SLC35D1
RAD51AP1
C12orf4
SOWAHA
DOCK5
WDR54
C2orf81
GLI4
CLIC5
PPP2CB
CCND2
CDHR2
RNF44
CPNE8
SUCLA2
RAPGEF4
CEP43
RBM33
SSTR1
PLAAT3
FOXL3
SEL1L3
CSF1R
ERF
TRAF5
ZNF768
ZNF747
ITGB5
MNX1
BCL9L
ODC1
RPS26
NEK2
PSMD1
SPOCK2
LIPH
MUC13
CRYBA4
PYM1
DGKA
HMOX1
LOC390877
GTF2F1
MYD88
ACAA1
PYGL
B3GLCT
LMTK3
NFIB
CCDC42
ECM2
SIRT7
NPB
PCYT2
TNFAIP8L1
CKMT1A
HSD17B2
CFLAR
SLC50A1
EFNA1
CCDC93
ANKRD6
SUOX
LRP2
RAPGEF2
NCOA2
SLC11A2
C15orf40
SIN3A
XPNPEP1
GUCA2A
TMEM220
CCNI
PMM1
SOX30
C5orf52
TOMM5
GABPB1
ZC3H12D
CNIH1
ZFYVE27
TMEM181
RIN3
STARD4
KATNB1
GLIS3
LGALS4
GUCY2C
SNRNP35
UBE3B
PDE5A
AMACR
ACADM
AXL
SMCO2
DUSP18
LAMA3
INSIG2
RHEX
MRPL24
UBE2R2
GAS6
FAM102A
GSAP
ZFAND6
POLR2E
GPX4
PRR3
GNL1
TRIM2
C1orf74
TARBP2
NPFF
MAP3K12
C19orf33
SELENON
SLC7A5
DHRS3
DSP
RNF43
GSTM4
CHAD
WFIKKN1
METTL26
RSAD1
IL6ST
OR6V1
PXN
HOXA5
RAB5A
EFHB
IRF8
KDSR
HOXA7
HOXA6
PHF12
KDELR2
MESP2
NR1H3
ACP2
TMEM63A
LEFTY1
PDGFRB
CDX1
TMIGD3
ADORA3
DHX37
BRI3BP
ZNF232
USP6
TEP1
PRDM11
OGFR
IFNGR1
UGT1A1
LRIG2
GGCX
KIAA1549L
PTPRN
DDC
LAG3
TMEM262
CD4
NIPAL1
CNGA1
DDAH1
ATF4
TSC22D4
NYAP1
FUT4
MGAT1
FOXQ1
LEKR1
EOMES
VSIG2
NRGN
LIPK
CHMP4B
PYROXD1
TTC22
EMX1
LEXM
ZNF195
CPLX2
NOMO2
NOMO3
ABCC6
CEACAM16
PUSL1
ACAP3
OVOL1
AP5B1
CGN
UBALD2
TRIM31
SEC22B
PRKCA
APOL4
ITPRID2
EXT1
VILL
PABPC4
JMJD1C
SLC25A16
RPL36AL
MGAT2
MLH3
NT5DC1
TIMP4
FOXP1
CEP85
CERKL
VAC14
TTC24
IQGAP3
ABCB4
SH3BGRL3
VAV1
SH2D3A
CEP170B
MXD3
RAB24
PRELID1
LASP1
ZSWIM3
ACOT8
EFNA2
USH1C
OTOG
FAM174C
STX18
SPO11
NRP1
TNFRSF21
UGT8
MACC1
SLC20A1
F11R
RBM14-RBM4
RBM14
LOC102723360
TNFSF4
ANO6
ZNF789
ATP5MF-PTCD1
ATP5MF
BCL7B
ITGB3BP
EFCAB7
RARRES1
CAST
PANK1
WDR81
TLCD2
RARA
PRR5
TNIP1
TFEB
PGC
PPFIBP2
CES3
GBA
CDC14A
HLA-A
PRR5-ARHGAP8
DRD4
PPP1R27
MCRIP1
CYCS
ZNF57
GNPAT
C1orf131
KLHDC8B
SLC12A3
RELL1
RASSF9
CTTNBP2NL
MS4A8
ZBTB48
GAB1
S100A16
S100A14
PDE11A
LZTS3
ABAT
HRH1
LIPE
PRDM10
STARD7
TOB2
PDE4D
CDC6
SAXO2
EFL1
ST3GAL2
FCSK
MYO1E
LSM14A
HSPG2
ADGRA1
UAP1
PLS1
GSE1
RGS3
NME4
DECR2
FRG2C
B4GALT4
EML6
PALB2
DCTN5
DOCK8
DENND2B
AP1M1
XYLB
UBA6
C6orf132
RREB1
SNX7
POP5
EXD2
SART3
ISCU
CLCN3
THRA
LSM2
HSPA1L
HSPA1A
METTL27
SUSD1
SYNPR
ALPG
TNFRSF14
IL4R
CTSO
KIF21B
UNC93B1
ALDH3B1
NEK7
ZBED4
HABP2
RFLNA
SYT17
ZZEF1
CYB5D2
SH3D19
PPIP5K2
GIN1
B3GNT3
HDGF
OSGIN1
OCIAD1
TACC1
SPATA5
NUDT6
CORO1C
OTULIN
NDRG1
ETFDH
C4orf46
OBI1
NBPF15
REXO4
ADAMTS13
AKAP1
CRY2
UFL1
FRMD3
LRRC66
SFXN3
PDZD7
COL13A1
SRC
SLC22A23
RAB6D
NRBF2
TYMSOS
TYMS
NEIL1
LPGAT1
GPR68
CERK
HAGH
FAHD1
CD177
CYP2C8
FBXO22
XAGE1B
XAGE1A
H4C9
H2BC12
H2BC11
H2AC12
H2AC11
MVP
STAT6
IRF2BPL