ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
SCRT2
KNL1
SKIV2L
NELFE
ISG15
HES4
NDUFS1
EEF1B2
CCDC71
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MIA2
KIF5C
PADI3
NSMCE1
NEK2
PHF12
CRYBG2
WDR36
PLOD1
KIAA2013
ITPRIPL2
DNAJC25-GNG10
DNAJC25
UQCRHL
ACSL5
RGPD2
RGPD1
ZFP36
PLEKHG2
ZSWIM3
ACOT8
B3GLCT
ERICH3
MORC1
SPTBN4
SFRP5
SPHK2
DBP
IGFBP4
DUX4
SPON1
SEPTIN4
CSTF1
AURKA
MTRNR2L1
EXOC1
POLR2E
GPX4
SLC3A2
SNRPA
C19orf54
ART1
LMTK3
CCL20
PPIP5K2
GIN1
SLC41A2
LASP1
SH3D21
SFTPC
BMP1
NR1I3
POLDIP3
SIAH2
RPS3A
LSM1
BAG4
FAM169A
LOC390877
GTF2F1
RHOC
MYC
ADAMTS6
MPI
MIDEAS
ERBB3
PRR3
GNL1
NCS1
INAVA
CPLX2
SOWAHA
PCGF1
LBX2
PRKAG2
ATP5MC3
PPEF2
RAB5C
KDM3A
NDRG1
RPL34
PTPRF
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
CHST11
PRKCSH
CCDC151
MRPL24
HDGF
SMG8
URGCP-MRPS24
URGCP
OCIAD2
MTMR11
C11orf49
PAX2
MTFMT
ZBED9
SH3D19
ARNT
TTC31
CCDC142
SEC24D
FUT5
LOC100509620
SASH1
ADAM22
HMOX1
UBE2R2
PLAUR
ABLIM1
DPAGT1
C2CD2L
LENG8
B3GNT3
PCBP1
TRIM2
ZC3H10
RPL41
UROS
BCCIP
NLRX1
CDH17
FAM110B
GNB1
BCL9L
TAOK3
SUDS3
MVP
CAB39
CCNI
PHC2
CAMK2N1
YARS1
S100PBP
PPP2CB
IFI35
RPL27
RBBP5
BRD4
YPEL1
RABGGTB
GSTA3
PJA2
RAPGEF1
MRPS10
IRF2BP2
SLC7A5
SCARB1
STAT6
TPD52
PRKCI
VAC14
TINAGL1
PPP5D1
CALM3
MAMDC2
WSB2
PTK7
SNRPF
PSMA5
SLC27A5
NR2F2
S100A16
S100A14
PRDM10
SELENOI
ADGRF3
NKPD1
LIPK
CD86
ZNF696
NMD3
KCNMB4
NRCAM
IDH1
CAMK2G
TJP3
PHACTR4
CUX1
PYCARD
BORCS7
CSF1R
RTBDN
MAST1
IL6ST
TESK2
MMACHC
CCDC163
MYRF
CCDC90B
GNAZ
SFXN3
PDZD7
JUND
IQCN
PHF14
CCND2
RAB17
GALE
OXCT2
MLEC
NUPR2
CHCHD2
PARP14
PTP4A1
SLCO4A1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
IL20RB
C19orf33
CARM1
CD2BP2
RNF121
LOC100133315
PAF1
ARID1A
RIPK4
CERS4
TRIP12
FBXO36
TEX45
PEX11G
TMEM71
PHF20L1
CSNK1A1
SERINC2
EIF4A2
ATXN7L1
POLR1E
RAD51AP1
C12orf4
SMAD3
U2SURP
SGIP1
ANK2
USP37
CNOT9
TSC22D1
ZC3H12D
FBXO46
TNFRSF1A
HOXA4
HOXA3
HOXA5
LUC7L2
FMC1-LUC7L2
FMC1
ADAMTS14
SAXO2
EFL1
ARHGEF39
SIT1
CCDC107
SLC20A1
C1QTNF1
GRAMD2B
SLC25A5
IGF2BP3
NCKAP5
PWP1
CEP250
COX16
TMEM169
PECR
TNS3
MIDN
RBFOX2
CBARP
ATP5F1D
ARPIN-AP3S2
ARPIN
TMED4
DDX56
ABHD2
TREX1
SHISA5
CREB3L3
VPS54
FHL2
GPA33
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
CTSO
LIM2
NIBAN2
BCAR3
SERINC5
MLF2
PRAG1
ZFYVE28
PLA2G4C
TNFAIP8L2
SCNM1
LYSMD1
NDUFAB1
FIBCD1
PRR15L
EHD1
GPANK1
CSNK2B
C6orf47
APOM
LY6G5B
SAMD1
C19orf67
ZFP36L1
LCN12
FBXW5
C8G
PRKCD
ALG14
METTL24
RCAN1
CPHXL
MAP4K5
ATL1
KPNA7
IRAG1
MSL1
ALDH3A2
LSM5
AVL9
RPS26
DIDO1
TKFC
DDB1
RAD50
ATP13A3
RNGTT
SCP2
VPS26B
NCAPD3
TM4SF1
FCHO2
COMTD1
LOC730098
CCL27
IGSF23
KRTAP5-7
EPOP
PLA2G7
ANKRD66
RBP2
ITPK1
SLC27A4
ZFAND3
BLVRB
KATNB1
PAQR4
KREMEN2
BORCS6
MGST2
SP1
EAPP
CITED2
ADGRB1
LGALS4
MYO1E
NPTN
PFKP
ZBTB8OS
RBBP4
NEK6
CSDC2
ZNF592
PIH1D1
ALDH16A1
TRIP10
GPR108
SLC9A3R1
ATRN
METTL7B
CYP17A1
SPAG8
HINT2
MBD3
RPL18
LIMK2
PAK4
PPP1R9B
RDH5
ITGA7
CD63
BLOC1S1
CTSE
OSBPL3
USP2
CORO1C
TMCO1
DKK1
EIF3F
MMP20
EIF1AD
CST6
BANF1
ARL14
CYP2C18
RGS3
FAM107B
KIZ
WDR1
PLAAT3
ZNF165
OR1F12
ROMO1
NFS1
SNTB2
MDM4
PDPK1
CEMP1
ACAA2
RNF43
ITGA3
RNF114
CERS2
SPAAR
HRCT1
VWCE
SWSAP1
SH2D5
RAB11A
RARA
TYSND1
PGAP3
ERBB2
RPS6KA1
ADPRHL1
GOLGA6D
PPP1R37
FDXACB1
C11orf1
ALG9
IVD
PISD
NCOA4
TDP2
ACOT13
TOB2
TTI2
CASTOR1
PLK2
AHSP
PRX
SERTAD1
PARP16
POLD4
GNAL
CHMP1B
ABHD12B
SEPSECS
INO80B
WBP1
H4C3
H1-6
TRIB3
ADI1
CLASP1
WDR74
STX5
EPS8L2
DEAF1
GAB1
TAF6
MBLAC1
CNPY4
LAMP3
NR1D1
BTBD16
ZG16B
PLXDC1
LIPE
NRP1
GPR137
MOGAT3
WDPCP
MDH1
ACHE
UFSP1
GRID1
DNASE1L3
PDXP
ABCC3
SPTBN1
GLRX2
CDC73
GTF3A
WNT7B
MED20
BYSL
DCAF1
SEC13
ECHS1
SELENOP
PKP4
CCDC148
HNF1A
CNNM3
HAAO
VIL1
SCAF11
VTN
SEBOX
SARM1
SLC7A7
SLCO2B1
RBKS
BABAM2
ZMIZ1
PKDCC
TACR2
SIRT7
PSMD1
NPB
AGPAT2
ORC2
LRRC1
PINK1
PCNX3
MAP3K11
GET1-SH3BGR
GET1
KIF21A
PCYT2
PANK1
NUMB
ZSWIM1
SPATA25
NEURL2
CTSA
PABPN1
ARHGAP27
IST1
CLIP2
DOCK6
TATDN3
NSL1
GPR35
AHCY
MACC1
ZNF567
GPR171
ZBTB48
CDK3
SERPINB1
SMPDL3A
PHETA1
MMADHC
HADHB
HADHA
GGT1
ACOX2
CDC14B
ATE1
AFF1
LHPP
USP18
PHLDB3
TP53I13
ABHD15
NOMO2
NRL
DCAF11
NOMO3
ABCC6
ACY3
SULT2B1
SEC23A
LY75-CD302
LY75
APOC3
MAD2L2
FBXO6
AP1AR
FGFR3
CCN2
GUCA1B
F10
AQP11
CARHSP1
RAB37
APOA1
DENND2B
AP1M1
EPS8L3
GCLC
EPS8
CSNK1D
PLEKHG6
AGMAT
SLC35D2
TULP2
NUCB1
SRCIN1
SLC19A3
SUCLA2
CNDP1
VHLL
TMEM79
SMG5
GLMP
HNMT
ALOX12B
PLXNB2
DNAJC22
COLCA2
BRMS1
B4GAT1
F11R
FTH1
IDNK
NQO2
EDEM1
AJUBA
IQANK1
FAM83H
AKR1A1
PRUNE1
MINDY1
ZNF232
USP6
STK24
SDC1
PPIL2
GPRC5C
VAMP8
VAMP5
SNRPD3
GUCD1
DENND5B
RHEX
DOCK5
NDUFA6
ZNF219
TMEM253
DHRS3
ID1
FN3K
CDR2
PDF
AHSG
NR0B2
SRSF11
LRRC40
BPHL
TPCN2
WEE1
C2orf88
SYBU
MYD88
ACAA1
PUS10
PEX13
TRIM15
TRIM10
COPS4
NUDC
ASS1
FBXO31
GDI2
CDHR2
SDCBP2
PAAF1
COA4
GDF7
INPP1
GSE1
PET117
KAT14
CA9
LURAP1L
TRAF7
RAB26
DOK4
TIGD3
COMT
GTF2I
CFLAR
CERK
SPATA2
GLRX
LAMB1
NOMO1
PDLIM2
NQO1
HDHD3
APOB
COL21A1
XYLB
PTK2B
CCL16
TMEM177
MYO18A
CPNE5
ANKS4B
KIF1C
INCA1
KRTAP5-6
AFP
GPR142
SLC45A4
TTYH3
WFDC9
WFDC10A
BCAR1
DAND5
POR
APOA4
MMP24OS
MMP24-AS1-EDEM2
FAM83C
PER2
TBC1D22A
UBR4
TK1
BLOC1S5
TCP10L
TDRD7
FYB2
HIC2
LARP1
FUOM
TCIRG1
NDUFS8
SMARCD1
ASIC1
GAL3ST2
MRPL2
KLC4
CUL7
FNDC11
GSDMD
TNRC18
LOC100129484
RAB5IF
CTDSP1
TMBIM1
AGXT
MAN2C1
ZNF764
REG4
GIMAP5
GDF15
ATP7B
ALG11
PTK6
KLHDC2
IL32
PERP
PPP1R27
MCRIP1
CP
HGD
IQGAP2
GJB1
PTPRN2
MAN1A1
BRCA1
AGT
PTDSS2
ANO9
MLXIPL
CBY3
RSPH10B2
RSPH10B
CA5A
SMIM19
SLC20A2
CPPED1
DNAAF2
ZNF827
CFB
PLEKHB2
FAM168B
RNF44
SH3GL1
SPINT2
CYB5R3
ATP5MGL
FASTKD1
C11orf24
ADAP1
SPPL2B
LSM7
CPNE7
WAS
SECTM1
IFNGR1
LRP1
RAPGEF4
VPS25
NEK4
ITIH1
TAS2R19
WNK4
MBNL2
EPHX2
SOS1
KDELR2
NID1
PRAP1
SRMS
C1orf210
ALKBH7
FITM2
PSPN
GNG4
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
DDAH2
CLIC1
LIME1
NHSL1
SPG7
F7
GAL3ST1
SMAGP
PALM3
PEPD
PPP4C
TRIM47
GAPDH
ITGB2
G6PC
PON2
PDE11A
RAB43
HINT1
TNFRSF10B
PABPC4
WDR81
TLCD2
LTV1
SPDYE14
SPDYE10P
PCGF5
SEPTIN9
SERPINF2
POLR2C
TSPAN8
MICAL2
IL1R1
APOL6
C1orf174
MOV10L1
RAMP1
PROCR
ZSCAN2
GLYCTK
CXADR
C1GALT1
BCL2A1
TNFSF15
ZNF214
NLRP14
ABCD3
PRSS8
IRF2BPL
MGAT1
CDKN2AIP
GIP
MRPL20
CCNL2
UCKL1
EFNA2
OPA3
NFATC3
RUNX1
SDR9C7
MMP15
LPP
PRMT1
IRF3
BCL2L12
C9orf64
ADGRG1
DENND10
SLC2A9
DNMT3A
TRIM14
TECTB
PDGFB
FMN1
MBL2
QPRT
RUVBL1
EEFSEC
ATP6V0A1
LOC102723996
ICOSLG
ELL
PEMT
SLURP2
TRAF4
H6PD
DKK4
COL5A3
FOXA3
LRRC20
NCR3LG1
RASA4
TCAF1
PRXL2A
SF3A2
PLEKHJ1
SIN3A
FGG
EGLN1
ZFAND2A
NOL4L
SPOCK2
ATXN7
ENDOD1
ZNF184
TANK
C11orf86
ANXA9
OPTN
CCDC3
GNA11
SH3BGRL2
KANK1
KIFC3
BIRC2
TADA1
SH3YL1
ACP1
C3
TEP1
TPT1
ZNF564
DMAP1
GLI1
KHNYN
INHBE
CBLN3
CSRNP1
HSD17B11
MST1
RNF126
SLC39A14
TRIM26
NEU4
KIF5B
MESP2
CDIP1
HAGH
FAHD1
DIP2C-AS1
SPTSSA
UBA5
ACAD11
MIA3
PLIN3
SCN9A
SEC16B
VEGFA
SMYD5
DSP
AKAP1
ZNF541
MTA3
MRPL33
HCAR3
HCAR1
STX16
AKT2
CDX2
TMEM270
CAPN2
C12orf43
NUDCD1
UBA6
CAPN3
TMEM150B
MYL12B