ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

ISG15
HES4
KDM6B
SCRT2
NSMCE1
MIA2
CRYBG2
MTRNR2L8
NDUFS1
EEF1B2
PHF12
PPIP5K2
GIN1
RBKS
BABAM2
SKIV2L
NELFE
NEK2
CSTF1
AURKA
DUX4
ACSL5
DNAJC25-GNG10
DNAJC25
C11orf49
SCAF11
PADI3
CCDC90B
ARHGEF39
SIT1
CCDC107
URGCP-MRPS24
URGCP
CCDC71
MYC
B3GLCT
LSM1
BAG4
KIF5C
SLC7A5
SLC3A2
SFRP5
RHOC
ATXN7L1
ZFP36
PLEKHG2
UQCRHL
POLDIP3
MTRNR2L2
MSH3
DHFR
SLC9A3R1
PPP2CB
WDR36
MTRNR2L1
GNAZ
SLCO4A1
ITPRIPL2
CEP152
MORC1
RTBDN
MAST1
NR1I3
RABGGTB
KNL1
BCL9L
CD2BP2
ZNF764
EXOC1
ZSWIM3
ACOT8
CDC14B
SEC24D
MTFMT
SPTBN4
LASP1
SPHK2
DBP
ATRN
U2SURP
SNRPA
C19orf54
LOC100509620
FHL2
RPS3A
PLOD1
KIAA2013
RAB5C
IST1
RGPD2
RGPD1
PLEC
YARS1
S100PBP
POLRMT
FGF22
CCL20
SEPTIN4
PLK2
IDH1
ARL14
GFI1B
TSC1
INAVA
CD86
PRR3
GNL1
SH3D19
EIF1AD
CST6
BANF1
COL23A1
SPDYE14
SPDYE10P
MIDEAS
SOWAHA
TMEM262
SPON1
IFI35
RPL27
APOBEC3H
RAB17
RPS7
SNRPF
EPS15
PIKFYVE
FAM169A
SASH1
CLCF1
KIF21B
PRKCD
ABHD12B
LCN12
FBXW5
C8G
METTL7B
PIH1D1
ALDH16A1
PPP1R37
SPAAR
HRCT1
C1QTNF1
ZNF585B
ZNF383
ZC3H10
RPL41
EPS8L2
DEAF1
SYT7
LENG8
CCND2
TRIM2
MRPS28
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
PCNX3
MAP3K11
SIAH2
TNS3
GALE
ERICH3
PCBP1
OCIAD2
MRPL24
HDGF
ABLIM1
TBCCD1
DNAJB11
TNFRSF10B
GOLGA4
UROS
BCCIP
SLC52A1
IRF2BP2
TRIB3
B3GNT3
TAOK3
SUDS3
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
FCHO2
SAMD1
C19orf67
IGFBP4
LARP1
RNF10
COQ5
NCS1
FBXO46
DSTYK
PTP4A1
TREX1
SHISA5
C1orf174
OGT
ATP5MC3
PAQR4
KREMEN2
PCGF1
LBX2
MAMDC2
PRKCSH
CCDC151
STAT3
HNRNPH1
LOC102723996
ICOSLG
POLR1E
PLAUR
C11orf86
EAPP
FAM98B
GOLGA8B
MYRF
ARPIN-AP3S2
ARPIN
RAPGEF1
RBM27
LOC390877
GTF2F1
PCGF5
LMTK3
ABCC3
ZBED9
LIPK
ZNF219
TMEM253
OXCT2
ZNF564
RAD50
NCKAP5
BORCS7
USP37
CNOT9
GLG1
TINAGL1
CUX1
HMOX1
SH3D21
ADGRA2
RBIS
SFTPC
BMP1
PDAP1
BUD31
LOC730098
CCL27
PAFAH2
WDR1
SNRPB
MSL1
CAMK1D
FNDC11
HELZ2
DENND5B
MAN2C1
ANXA11
MRPS30
SP1
PTPRF
ZSWIM1
SPATA25
NEURL2
CTSA
KMT5A
TJP3
FUOM
PRAP1
PDPK1
CEMP1
GUCA2A
HAO1
ADAMTS6
KCNC3
POLR2E
GPX4
INTS12
GSTCD
LMNB2
CREB3L3
CARM1
KCNMB4
ALG10B
SEC23A
GFM1
MDM4
ZKSCAN2
ART1
PIM3
MLEC
LPIN1
ADPRHL1
RPL12
LRSAM1
LPAR2
GMIP
IDNK
MAD2L2
FBXO6
KRTAP5-7
NUDCD1
KLF6
LOXHD1
LSM5
AVL9
RPL23A
RAB34
PROCA1
TLCD1
MEAK7
SSTR5
ARNT
TMEM181
CNDP1
PSMA5
KRT36
KRT13
BAZ1B
KLRC3
EIF4A2
FRG2C
BRD4
RAB11A
NMD3
GJB1
CLASP1
CCNI
SH3BP5L
CMC2
MKRN3
CENPN
SMARCD2
RCAN1
EPS8L3
TDP2
ACOT13
GAL3ST1
ATXN2
FRG2
KDM5A
CCDC77
COBL
HEXIM1
AHSP
RBFOX2
SLC27A5
TATDN3
NSL1
GDF15
KPNA7
BBC3
PPP1R13L
POLR1G
RAD51AP1
C12orf4
SLC27A4
EPB41L4B
ONECUT3
ERBB3
GSTA3
PRAG1
CAB39
SBNO2
SYTL1
ZNF592
TTI1
RPRD1B
USP16
RWDD2B
PPP5D1
CALM3
ALOX12B
BIRC2
TMEM101
SYNGR4
TPD52
PYY
NAGS
TRIP12
FBXO36
LHB
CGB3
ATF7-NPFF
ATF7
SELENOP
SNTB2
CCDC59
RIPK4
GDA
RPL34
LAMTOR5
PEMT
TADA2A
ACACA
SMIM29
HMGA1
LIMK2
TOB2
NKPD1
NFXL1
NUP62
IL4I1
ATF5
C2CD2
PJA2
TRIM15
TRIM10
PECAM1
RPGRIP1L
FTO
PRMT1
IRF3
BCL2L12
CHST11
RPS29
MMP20
SMG7
LGALS1
HERC5
CALM2
GNB1
STRA6
H4C3
H1-6
PISD
ITPK1
SRSF11
LRRC40
NUBP1
USP2
RPS6KA1
MVP
FUT5
PAX2
RNGTT
GAB1
FAM110B
TEAD4
PFKP
PLA2G2E
ZNF77
ADAM22
AAR2
H4C12
H4C11
BAK1
HGS
ARL16
H2BC14
H2AC14
ZBTB48
AFF1
PHC2
INTS4
PHF14
RBBP5
GALK2
COPS2
SLCO2B1
PHETA1
JUND
IQCN
STN1
KATNBL1
MTMR11
IER5L
WDR90
BCL6
EPS8
SERINC5
NUCKS1
ADGRG1
GPANK1
CSNK2B
C6orf47
APOM
PLXDC1
LY6G5B
FCGR3A
CAMK2G
DPAGT1
C2CD2L
SLC41A2
BANP
PIP5K1C
TRIP10
GPR108
SAXO2
EFL1
GMEB2
MRPL34
DDA1
ABHD8
LAPTM4A
ZNF335
IGSF23
KLRC2
PRRG2
NOSIP
POLG
TM4SF1
IL20RB
NQO2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
TUSC2
ETV4
UBE2R2
HYAL2
HYAL1
PYCARD
NCSTN
COPA
CELA2A
PRR14
FBRS
SMAD3
SPOCK2
MYL12B
CRYGS
DOT1L
KATNB1
PHACTR3
NFATC4
KIF16B
MTFR2
KDM3A
NDRG1
NRP1
MBD3
NR2F1
PABPN1
CASTOR2
H1-0
GCAT
NRBP2
EHD1
ZNF165
OR1F12
VPS54
RARA
RAB11FIP4
C1QTNF6
RNF43
ITGA3
ATF4
PLXNB2
ZC3H12D
LAMP3
PDE4C
COPB1
RGS3
TMPRSS9
NUP107
PTPRG
FOSL1
FIBP
CCDC85B
ZNF526
DEDD2
SELENOI
ADGRF3
PITX3
GBF1
SLC20A1
MAP4K5
ATL1
RMDN3
GCHFR
C15orf62
GPR137
PDE11A
WDR27
C6orf120
PSD
FBXL15
OPA3
PPP1R12B
UBE2T
TIMMDC1
APBA2
GBA
PARP2
CCNB1IP1
PIPOX
CALML4
SYT12
PRDM10
SHF
NEDD4L
TRUB2
COQ4
BORCS6
PRR15L
SGIP1
TMEM141
TBP
PSMB1
PPP1R9B
MITD1
THRA
MEF2D
MMADHC
FTH1
BEST1
C19orf33
SNN
STAT6
DYSF
TAF6
MBLAC1
CNPY4
ACAA2
PTPN6
C12orf57
STK35
H2BC15
H2AC15
VTA1
NMBR
TTI2
POT1
SGO1
LFNG
MPI
RPF2
NR1D1
NME1-NME2
NME1
ALDH2
ARHGAP32
S100A16
S100A14
IL32
ITFG2
FBXO33
ECHS1
PKP4
CCDC148
HNF1A
CERS2
CNNM3
HAAO
VIL1
VTN
SEBOX
SARM1
SLC7A7
PGAP3
ERBB2
TMEM169
PECR
ZMIZ1
PKDCC
TACR2
SIRT7
PSMD1
NPB
AGPAT2
SEC13
PDXP
ORC2
LRRC1
PINK1
GET1-SH3BGR
GET1
KIF21A
PCYT2
PANK1
CDH17
NUMB
ARHGAP27
CLIP2
DOCK6
GPR35
AHCY
MACC1
ZNF567
GPR171
TSC22D1
CDK3
SERPINB1
SMPDL3A
DIDO1
CPLX2
HADHB
HADHA
GGT1
ACOX2
ATE1
LHPP
USP18
PHLDB3
TP53I13
ABHD15
NOMO2
NRL
DCAF11
NOMO3
ABCC6
ACY3
PAF1
SULT2B1
LY75-CD302
LY75
APOC3
LGALS4
AP1AR
MGST2
FGFR3
CCN2
GUCA1B
F10
AQP11
CARHSP1
PRKAG2
RAB37
APOA1
DENND2B
AP1M1
GCLC
CSNK1D
PLEKHG6
AGMAT
SLC35D2
TULP2
NUCB1
SRCIN1
SLC19A3
SUCLA2
IL6ST
GPA33
VHLL
TMEM79
SMG5
GLMP
NCOA4
HNMT
DNAJC22
COLCA2
BRMS1
B4GAT1
F11R
EDEM1
AJUBA
IQANK1
FAM83H
AKR1A1
PRUNE1
MINDY1
ZNF232
USP6
STK24
SDC1
PPIL2
GPRC5C
VAMP8
VAMP5
SNRPD3
GUCD1
WSB2
CYP17A1
RHEX
DOCK5
NDUFA6
DHRS3
ID1
FN3K
CDR2
PDF
AHSG
NR0B2
POLD4
BPHL
TPCN2
WEE1
C2orf88
SYBU
MYD88
ACAA1
PUS10
PEX13
COPS4
NUDC
TESK2
MMACHC
CCDC163
ASS1
FBXO31
GDI2
SFXN3
PDZD7
CDHR2
SDCBP2
PAAF1
COA4
GDF7
INPP1
GSE1
IGF2BP3
PET117
KAT14
CA9
LURAP1L
TRAF7
RAB26
DOK4
TIGD3
COMT
LIPE
GTF2I
CSF1R
CFLAR
CERK
SPATA2
GLRX
LAMB1
NOMO1
PDLIM2
NQO1
HDHD3
APOB
COL21A1
XYLB
PTK2B
SCARB1
CCL16
TMEM177
MYO18A
CPNE5
TTC31
CCDC142
ANKS4B
KIF1C
INCA1
KRTAP5-6
AFP
GPR142
SLC45A4
TTYH3
WFDC9
WFDC10A
BCAR1
DAND5
POR
APOA4
MMP24OS
MMP24-AS1-EDEM2
FAM83C
PER2
TBC1D22A
UBR4
TK1
BLOC1S5
TCP10L
TDRD7
FYB2
HIC2
CORO1C
TCIRG1
NDUFS8
SMARCD1
ASIC1
GAL3ST2
MRPL2
KLC4
CUL7
GSDMD
TNRC18
LOC100129484
MIDN
RAB5IF
CTDSP1
TMBIM1
AGXT
REG4
GIMAP5
ATP7B
ALG11
PTK6
KLHDC2
FAM107B
PERP
PPP1R27
MCRIP1
CP
HGD
IQGAP2
PTPRN2
MAN1A1
BRCA1
AGT
PTDSS2
ANO9
MLXIPL
CBY3
RSPH10B2
RSPH10B
CA5A
SMIM19
SLC20A2
CPPED1
DNAAF2
ZNF827
CFB
PLEKHB2
FAM168B
RNF44
SH3GL1
SPINT2
CYB5R3
ATP5MGL
FASTKD1
C11orf24
MOGAT3
ADAP1
SPPL2B
LSM7
CPNE7
WAS
SECTM1
IFNGR1
LRP1
RAPGEF4
VPS25
NEK4
ITIH1
TAS2R19
WNK4
MBNL2
EPHX2
SOS1
KDELR2
NID1
TKFC
DDB1
SRMS
C1orf210
NIBAN2
ALKBH7
FITM2
PSPN
GNG4
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
DDAH2
CLIC1
LIME1
NHSL1
GNAL
CHMP1B
SPG7
F7
SMAGP
PALM3
PEPD
PPP4C
TRIM47
GAPDH
PTK7
ITGB2
G6PC
PON2
RAB43
HINT1
PABPC4
WDR81
TLCD2
VWCE
LTV1
CBARP
ATP5F1D
PAK4
SEPTIN9
SERPINF2
POLR2C
TSPAN8
MICAL2
IL1R1
APOL6
MOV10L1
RAMP1
PROCR
ZSCAN2
GLYCTK
CXADR
C1GALT1
BCL2A1
TNFSF15
ZNF214