ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MTRNR2L8
MTRNR2L2
MSH3
DHFR
KDM6B
ISG15
HES4
KIF5C
ACSL5
NDUFS1
EEF1B2
SCRT2
CRYBG2
MTRNR2L1
RGPD2
RGPD1
NSMCE1
NEK2
PHF12
PRR3
GNL1
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
ITPRIPL2
MIA2
SKIV2L
NELFE
CCL20
SLC9A3R1
ATXN7L1
UQCRHL
MYC
GNAZ
CCDC90B
TRIB3
SH3D21
SFRP5
PIH1D1
ALDH16A1
INAVA
CCDC71
ART1
MTRNR2L9
SEPTIN4
RPS3A
ARL14
ARHGEF39
SIT1
CCDC107
SCARB1
POLR2E
GPX4
URGCP-MRPS24
URGCP
CSTF1
AURKA
LMTK3
CDC14B
MIDEAS
RHOC
KNL1
LOC390877
GTF2F1
SEC24D
WDR36
RAPGEF1
CPLX2
CENPVL2
CENPVL1
DNAJC25-GNG10
DNAJC25
FAM169A
POLR1E
KIZ
DKK4
TESK2
MMACHC
CCDC163
ERBB3
SF3A3
PTP4A1
MORC1
ABLIM1
SLC3A2
PCGF1
LBX2
LASP1
RPL34
NEK6
SELENOP
BCL9L
PPIP5K2
GIN1
HMOX1
PADI3
PHC2
ZSWIM3
ACOT8
PPP2CB
CERS2
IRF2BP2
SPTBN4
TNFRSF10B
NCOA4
PRKCD
C19orf12
SPON1
B3GLCT
MRPS10
TMEM169
PECR
SGIP1
NQO2
PTPRF
AGPAT2
MMP20
SMARCD2
MRPS28
RPP25L
NR1I3
B3GNT3
FAM3C
NFE2L3
RAB17
ROCK2
IST1
EAPP
KRT31
YARS1
S100PBP
EXOC1
HRH2
BPHL
C11orf24
ZBED9
RBBP5
IRAG1
PLAUR
USP2
LENG8
SAXO1
RRAGA
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
GUCA1B
MVP
TPT1
CD2BP2
NCS1
GAB1
CFLAR
CLCF1
CEP128
SPHK2
DBP
SPATA18
SGCB
MEAK7
SP2
ULK4
SEC13
DUX4
ATRN
ARPIN-AP3S2
ARPIN
C1QTNF1
SIAH2
MRPL24
HDGF
ETS2
KRTAP5-7
UBE2R2
COPS4
GJB1
ADAMTS6
ADI1
KDM3A
PLOD1
KIAA2013
TNFRSF1A
TRIM2
TNPO3
CHST11
MMADHC
AFF1
PRAG1
NUP107
RBP2
SEC23A
SH3D19
ERICH3
RFX2
SLC20A1
TJP3
TP53I3
SF3B6
FAM228B
CDHR2
RNF44
TMEM183A
RBKS
BABAM2
PRDM10
GNB1
MICAL2
NFIL3
CSNK1A1
YJU2
INTS4
RFFL
MAP1LC3C
MAN2C1
LOC102723996
ICOSLG
SELENOI
ADGRF3
CLASP1
ABCA10
METTL7B
RARA
CAMK2G
VPS54
PAX2
GOLGA4
PGLYRP2
FUT5
ARNT
TTC31
CCDC142
GDF15
LOC100509620
RIPK4
GUCA2A
ZC3H12D
SNRPD3
GUCD1
TIGD3
OCIAD2
SPTBN1
MAP4K5
ATL1
AMN1
TMEM120A
PRXL2A
EIF1AD
CST6
BANF1
TM4SF1
TINAGL1
PDXP
MBD3
CUX1
RBFOX2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
KATNAL2
DUSP1
S100A16
S100A14
SLC25A17
GDPD1
ZNF827
PRKCI
RABGGTB
ABCC3
NUDCD1
APBA2
EIF4A2
TDP2
ACOT13
PRKCSH
CCDC151
TEX45
PEX11G
CA7
ALG10B
HMGN4
SLC27A5
ALDH3A2
BAAT
CCND2
BORCS7
CYP17A1
JUND
IQCN
CCNI
LSG1
TLCD4-RWDD3
TLCD4
CIBAR2
SNN
BCAM
POLD4
HOXA4
HOXA3
HOXA5
PPP1R35
CA13
SMAGP
RPS7
RNF43
ABR
IGFBP4
CA9
U2SURP
YAP1
MYRF
PEMT
PRKAG2
PSMA5
CD86
PJA2
AKR1A1
ACAA2
C1orf174
POLDIP3
PPP1R11
POLR1H
SOWAHA
P3H4
FKBP10
RPL7
RDH10
SHTN1
CELA2A
TKFC
DDB1
STK40
SLC7A5
LSM5
AVL9
SLC1A3
EDN2
RAB30
RCOR1
GLRX2
CDC73
RNF121
LOC100133315
DPAGT1
C2CD2L
TNFAIP8L2
RAB11FIP4
SCNM1
LYSMD1
RPS26
HEXIM1
TIMM9
KIAA0586
EPS8
MRPL2
KLC4
CUL7
CPHXL
PTS
RPL23A
RAB34
PROCA1
NDRG1
TLCD1
DCAF1
STAT6
TTI2
MYL3
NPTXR
PPP1R9B
ZNF653
FAM43A
LAPTM4A
VGLL4
DHX36
CCNP
TTC9B
MLEC
ZFP36
PLEKHG2
FAM110B
MPI
SPDYE14
SPDYE10P
SKIDA1
MLLT10
TMCO1
ITGB5
DYSF
DGKD
C2CD2
PIM3
MLF2
ZNF77
TBC1D10A
SNAI3
ECHS1
PKP4
CCDC148
EPS8L2
DEAF1
HNF1A
CNNM3
HAAO
VIL1
SCAF11
VTN
SEBOX
SARM1
SLC7A7
PGAP3
ERBB2
SLCO2B1
SLCO4A1
TREX1
SHISA5
ZMIZ1
PKDCC
TACR2
SIRT7
PSMD1
NPB
ORC2
LRRC1
PINK1
PCNX3
MAP3K11
GET1-SH3BGR
GET1
PPP5D1
CALM3
KIF21A
PCYT2
PANK1
CDH17
NUMB
ZSWIM1
SPATA25
NEURL2
CTSA
PABPN1
ARHGAP27
CLIP2
DOCK6
TATDN3
NSL1
GPR35
AHCY
MACC1
ZNF567
GPR171
TSC22D1
ZBTB48
CDK3
SERPINB1
SMPDL3A
DIDO1
PHETA1
HADHB
HADHA
GGT1
ACOX2
ATE1
LHPP
USP18
PRR15L
CREB3L3
PHLDB3
TP53I13
ABHD15
NOMO2
NRL
DCAF11
NOMO3
ABCC6
ACY3
PAF1
SULT2B1
LY75-CD302
LY75
SMAD3
APOC3
MAD2L2
FBXO6
LGALS4
AP1AR
MGST2
FGFR3
CCN2
F10
AQP11
NMD3
CARHSP1
RAB37
APOA1
DENND2B
AP1M1
EPS8L3
GCLC
CSNK1D
PLEKHG6
AGMAT
SLC35D2
TULP2
NUCB1
SRCIN1
SLC19A3
SUCLA2
CNDP1
IL6ST
GPA33
IDH1
VHLL
TMEM79
SMG5
GLMP
HNMT
ALOX12B
PLXNB2
DNAJC22
COLCA2
BRMS1
B4GAT1
F11R
IGSF23
FTH1
IDNK
EDEM1
LIMK2
AJUBA
IQANK1
FAM83H
TNS3
PRUNE1
MINDY1
CAB39
ZNF232
USP6
STK24
SDC1
PPIL2
GPRC5C
VAMP8
VAMP5
WSB2
DENND5B
RHEX
DOCK5
NDUFA6
ZNF219
TMEM253
DHRS3
ITPK1
IL20RB
ID1
FN3K
NR1D1
CDR2
PDF
AHSG
NR0B2
SRSF11
LRRC40
TPCN2
WEE1
C2orf88
SYBU
MYD88
ACAA1
PUS10
PEX13
TRIM15
TRIM10
NUDC
ASS1
FBXO31
GDI2
SFXN3
PDZD7
FCHO2
SDCBP2
PAAF1
COA4
GDF7
INPP1
GSE1
IGF2BP3
PET117
KAT14
LSM1
LURAP1L
TRAF7
RAB26
GALE
DOK4
COMT
LIPE
GTF2I
CSF1R
EHD1
CERK
SPATA2
GLRX
LAMB1
NOMO1
PDLIM2
NQO1
HDHD3
APOB
COL21A1
XYLB
PTK2B
RGS3
CCL16
TMEM177
MYO18A
CPNE5
ANKS4B
KIF1C
INCA1
KRTAP5-6
AFP
GPR142
SLC45A4
BAG4
TTYH3
WFDC9
WFDC10A
BCAR1
SP1
DAND5
POR
APOA4
MMP24OS
MMP24-AS1-EDEM2
FAM83C
C19orf33
PER2
TBC1D22A
UBR4
TK1
BLOC1S5
TCP10L
TDRD7
FYB2
HIC2
CORO1C
SNRPA
C19orf54
LARP1
FUOM
TCIRG1
NDUFS8
SMARCD1
ASIC1
GAL3ST2
FNDC11
SPAAR
HRCT1
GSDMD
TNRC18
LOC100129484
MIDN
RAB5IF
CTDSP1
TMBIM1
AGXT
ZNF764
REG4
GIMAP5
ATP7B
ALG11
PTK6
KLHDC2
IL32
FAM107B
PERP
PPP1R27
MCRIP1
CP
HGD
IQGAP2
PTPRN2
MAN1A1
BRCA1
AGT
PTDSS2
ANO9
MLXIPL
CBY3
RSPH10B2
RSPH10B
CA5A
SMIM19
SLC20A2
CPPED1
CARM1
DNAAF2
CFB
PLEKHB2
FAM168B
SH3GL1
SPINT2
CYB5R3
ATP5MGL
FASTKD1
MOGAT3
ADAP1
SPPL2B
LSM7
CPNE7
WAS
SECTM1
IFNGR1
LRP1
RAPGEF4
VPS25
NEK4
ITIH1
TAS2R19
WNK4
MBNL2
EPHX2
SOS1
KDELR2
OXCT2
NID1
PRAP1
SRMS
C1orf210
NIBAN2
ALKBH7
FITM2
PSPN
GNG4
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
DDAH2
CLIC1
LIME1
NHSL1
GNAL
CHMP1B
SPG7
F7
GAL3ST1
PALM3
PEPD
PPP4C
TRIM47
GAPDH
PTK7
ITGB2
G6PC
PON2
PDE11A
RAB43
HINT1
PABPC4
WDR81
TLCD2
VWCE
LTV1
CBARP
ATP5F1D
LIPK
PAK4
PCGF5
SEPTIN9
SERPINF2
POLR2C
TSPAN8
IL1R1
APOL6
H4C3
H1-6
PDPK1
MOV10L1
RAMP1
PROCR
ZSCAN2
GLYCTK
RAD50
CXADR
C1GALT1
BCL2A1
TNFSF15
ZNF214
NLRP14
ABCD3
PRSS8
IRF2BPL
ZFP36L1
ANK2
MGAT1
CDKN2AIP
GIP
MRPL20
CCNL2
UCKL1
EFNA2
OPA3
RCAN1
NFATC3
RUNX1
SDR9C7
PHACTR4
MMP15
LPP
PRMT1
IRF3
BCL2L12
C9orf64
ADGRG1
DENND10
SLC2A9
DNMT3A
TRIM14
TECTB
PDGFB
FMN1
PPEF2
MBL2
QPRT
RUVBL1
EEFSEC
ATP6V0A1
ELL
SLURP2
TRAF4
H6PD
COL5A3
FOXA3
LRRC20
NCR3LG1
RASA4
TCAF1
SF3A2
PLEKHJ1
PLA2G4C
SIN3A
FGG
EGLN1
ZFAND2A
NOL4L
SPOCK2
ATXN7
ENDOD1
ZNF184
TANK
C11orf86
ANXA9
OPTN
CCDC3
GNA11
SH3BGRL2
KANK1
KIFC3
BIRC2
TADA1
SH3YL1
ACP1
C3
TEP1
MTMR11
ZNF564
DMAP1
GLI1
KHNYN
INHBE
CBLN3
CSRNP1
HSD17B11
MST1
RNF126
FBXO46
SLC39A14
TRIM26
NEU4
KIF5B
TAOK3
SUDS3
MESP2
CDIP1
HAGH
FAHD1
SLC25A5
DIP2C-AS1
SPTSSA
MAMDC2
UBA5
ACAD11
MIA3
PLIN3
SCN9A
SEC16B
VEGFA
SMYD5
DSP
AKAP1
ZNF541
MTA3
MRPL33
HCAR3
HCAR1
STX16
AKT2
GPR137
CDX2
TMEM270
CAPN2
C12orf43
UBA6
CAPN3
TMEM150B
MYL12B
CEMP1
ZBTB46
ZNF710
LRP5L
COMTD1
TUBG1
RETREG3
CACNB2
MTIF2
CCL14
SERINC5
SARDH
DUS1L
TM4SF5
KLF3
PLXNB1
CCDC51
CRK
NNAT
NET1
BLCAP
USH1C
OTOG
SLC2A14
HJV
ABHD12B
SPRED2
FKBP7
AP1B1
NHLRC4
APOBEC3A_B
APOBEC3A
GDA
CIDEC
RBIS
MYADM
FAM50B
SEPSECS
LRRC3
CEBPG
IL4R
ZNF362
AMACR
TUBG2
PLXNC1
ASL
MTMR4
DENND1A
KMT5A
KHK
TMPRSS9
SLC38A3
RASA4B
DCBLD1
PC
KCTD17
ARHGAP18
SLC28A1
RXRA
GATA4
PNOC
SLC50A1
RBP5
EFNA1
CLSTN3
SPPL2A
TAF6
MBLAC1
CNPY4
CBSL
CBS
PCGF2
SLC47A1
EDN3
RCL1
MYL12A
PTTG1IP
RHBG