ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702027 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◣ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PKP4
CCDC148
CDH17
HAAO
GATA4
ZMIZ1
ALOX12B
TSC22D1
PLEKHS1
ZNF232
USP6
IQANK1
FAM83H
ATXN7
PINK1
SCAF11
MACC1
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
MIA2
SLC7A5
HMOX1
ABCD3
CDIP1
ZNF214
NLRP14
AQP11
MRPL20
CCNL2
RBKS
BABAM2
CCND2
SLC7A7
RPS3A
ZSWIM1
SPATA25
NEURL2
CTSA
RIPK4
NOMO2
NOMO3
ABCC6
AKT2
RASA4
MYO1E
DOK4
POLR2C
PALM2AKAP2
PCGF1
LBX2
PLXNB2
STARD7
CSRNP1
SUCLA2
NDUFA6
PERP
C1GALT1
MGAT1
KIF21A
F10
LHX1
SMIM11B
SMIM11A
EPS8L2
DEAF1
KMT5A
BORCS7
TECR
DNAJB1
AGPAT2
CDC14B
SKIV2L
NELFE
SPHK2
DBP
ZFAND2B
VRTN
AGMAT
PHF8
AHCY
VHLL
TMEM79
SMG5
GLMP
LRRC63
PABPN1
LSM14A
PHF12
PRKCD
ACO1
COPS4
TREX1
SHISA5
MYL12B
MYL12A
ARHGEF39
SIT1
CCDC107
VIL1
AHDC1
PDE11A
ERF
MDM2
ZNF813
PCNX3
MAP3K11
GATA3
RCAN1
CNOT2
METTL7B
C18orf21
DUX4
CDKN2AIP
LOC102724770
DGCR6
UGDH
TIMMDC1
CREBRF
ARHGEF16
TATDN3
NSL1
ZNF234
JUNB
KCNIP4
CNNM3
TBC1D19
COA3
CNTD1
ECHS1
HNRNPDL
ENOPH1
PPP5D1
CALM3
MFN2
RHOC
MGST2
CRYBG2
CMPK1
TNS3
SLC2A8
RAB32
PAAF1
COA4
DMAP1
SLC6A13
ARHGAP27
PPIL2
UBR4
SLCO2B1
TAOK3
SUDS3
MOGAT3
PKIB
ISG15
HES4
ZNF768
ZNF747
UHRF1BP1L
ATXN7L1
FTH1
CSRNP3
UQCRHL
NEK2
SMIM24
MYRF
HSPE1-MOB4
HSPE1
HSPD1
YBX2
ORC2
DNMT3A
ZNF564
TMEM177
SPINT2
KANK1
SIRT7
NPB
PCYT2
FGFR3
SH3D19
AP1AR
RASA4B
FNIP1
SRSF11
LRRC40
GBP6
DPP6
FRG2C
STK24
ZFP36
PAF1
DENND2B
MANEA
CEP85
SMCO2
COLCA2
TP53I13
ABHD15
STPG3
FAM166A
TUBB4B
SLC35D2
FRAT2
TJP3
WDR90
MMADHC
PPP1R12B
UBE2T
GAB2
LY75-CD302
LY75
GMNN
RHEX
EXOC1
NUDT16
DENND5B
PDGFB
SLC39A14
GRTP1
ZHX3
PITX2
TNRC18
LOC100129484
EPHX2
TBC1D16
CAMSAP3
TCTEX1D4
PLK3
BTBD19
BCL9L
KDM6B
PSMA5
SCLY
MTRNR2L8
PSMD1
C1orf174
VTA1
NMBR
VTN
SEBOX
SARM1
N4BP2L1
TACR2
PLPP5
PLEKHG6
RUNX1
CCDC71
KLHDC8B
HNF1A
IST1
NR0B2
NUDC
GPR137
ANK3
FYB2
SLC2A14
BIRC2
ADD3
NOMO1
SGCA
TPT1
ZNF764
ZSWIM3
ACOT8
CHD2
PRSS21
SEMA7A
LGALS4
PAK4
FBXL12
UBL5
TMEM218
RABL3
GTF2E1
EDN3
EIF4EBP3
SRA1
LIPE
MMP15
HEATR5A
PRR13
RAB11FIP4
ATXN1
WDFY3
TMUB1
AGAP3
CPNE4
SETX
HEXB
KLHDC7A
DHRS3
HSD17B11
TTI1
RPRD1B
N4BP2
PAPLN
ZNF362
TMEM176B
TMEM176A
OR6V1
DEFB131A
GDF10
LASP1
CACNB2
NLRC5
AHI1
CARHSP1
CCDC90B
USP10
KLF7
PRR5
PTK2B
GSDMD
PTPRN
LIPK
CD2BP2
KCNJ10
SOWAHA
PKP2
CERS2
NR1D1
DPYSL2
SUOX
PITX3
GBF1
PRPF40A
ARL6IP6
KNL1
ZNF219
TMEM253
CPHXL
CD34
KIF13B
RCOR2
RMDN3
GCHFR
C15orf62
DUSP15
SLC35A2
PIM2
CDK14
LRRC4
DENND2C
WDR97
MAF1
CYC1
CAPN15
SP1
TBC1D22A
COL13A1
DIXDC1
CRYAB
C11orf52
HIC2
KRTAP5-11
ZNF468
JPH2
ZBTB8OS
RBBP4
GCLC
EHD1
KRT8
SUN2
TESK2
MMACHC
CCDC163
COL21A1
CCDC93
RAB43
CLDN19
GALE
FOXA3
GSTM4
HNF1B
LYPLA2
SNTG2
SMG6
HDAC7
F7
CTTNBP2NL
MEIG1
DCLRE1C
IGDCC3
RNF31
PSME2
EMC9
NME4
DECR2
UBOX5
FASTKD5
LZTS3
SPTBN4
APOC3
APOA1
OTULIN
FAM110C
IER5L
GAS6
CYP2A6
POMC
CDC34
TRAF7
RAB26
PHC2
PHF2
C11orf94
IFI27L2
RARA
DOCK9
VANGL1
BEX1
COL1A2
INAVA
TMCO1
CBFB
EOMES
TP53I3
SF3B6
FAM228B
H1-0
GCAT
FERMT2
FUOM
LRP1
PRAP1
MSH5
DDAH2
CLIC1
EHHADH
SECISBP2
EFCAB14
ZDHHC9
TMEM178A
FOXD3
ZNF567
MIA3
NODAL
ANKRD26
BTN3A2
MEF2C
SFRP1
TEP1
MAP4K5
ATL1
RNF220
DYRK1B
PKDCC
CLIP2
SLC35D1
COL8A1
NR2F2
FAAP20
ATP1A2
GLI4
SAXO2
EFL1
HMGCS1
PYROXD1
ACY3
MMP24OS
MMP24-AS1-EDEM2
FAM83C
CPPED1
CCDC42
FMN1
C1QTNF8
DNAJA2
CFAP91
OVOL1
AP5B1
DONSON
ZBED4
MTARC1
AGXT
S100A2
LOXHD1
METTL8
DCAF17
ARHGEF17
LRRC1
HADHB
HADHA
RAB37
LNP1
TOMM70
NCR3LG1
GFM1
FAM131C
ATP11C
SYNGAP1
PHF1
CUTA
IL11RA
GALT
ID1
BAIAP2
TSEN2
SLC37A1
RSPH1
PRMT1
IRF3
BCL2L12
MARK2
TNFRSF10B
RXRA
ESRRA
CATSPERZ
ZNF415
KCNK10
TPM3
DNAJB5
SLC47A1
TMEM254
HHIPL1
CCDC85C
TSN
SYT9
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
LSM1
BAG4
MMP20
TMEM184A
FASTKD1
TFDP2
TTC38
PKDREJ
CCNT2
RGP1
MSMP
GBA2
HDGFL3
CBX4
CPNE8
TMEM144
TMEM92
TUBGCP6
HDAC10
MAPK12
AJUBA
GAL3ST2
C9orf85
ABHD17B
SLC25A6
DNAAF2
DLC1
RAPGEF1
KHDRBS1
SSTR1
ZFR
ANGPTL2
CSF1R
NFXL1
FDFT1
SHPRH
EFNA2
PRR3
GNL1
FAM174C
CLUH
SLC34A3
RNF224
RNF208
CYSRT1
PIK3R1
LARP1
RSPH10B2
RSPH10B
LAMTOR5
ZNF28
ISCA1
SNTG1
GDI2
SYNGR4
PHF7
BAP1
TSPAN33
LCN1
WASHC1
ZNF664-RFLNA
ZNF664
CCDC92
CDC5L
SMAGP
SLC22A23
UFL1
MPC2
DCAF6
MAP7D2
TTC31
CCDC142
GPR142
SH3BGRL2
BSDC1
DKK2
SYNCRIP
OTC
NR1H3
ACP2
CREB3L3
LURAP1L
SERPINF1
VGLL3
MAN2C1
ADAMTS14
NEK7
ABCB1
FADS6
PAN2
IL23A
MTMR2
ETFA
OBI1
GNAT2
AMPD2
TRIP12
FBXO36
SYNDIG1L
ADCY8
SEC23A
ADGRA1
PCIF1
HUS1
FAM193B
PLIN4
LRIG2
AGPS
CERKL
RGL1
ARPC5
TAGLN3
C2orf88
TINAGL1
SENP1
PFKM
IFFO2
CHODL
NUAK1
ZNF701
SDHAF1
MRPL40
HIRA
TRIM35
PCDH1
CRNKL1
CFAP61
SLC6A19
VAV3
DCHS2
PLCE1
SPON1
SNRPA
C19orf54
ASL
SLC7A6
IPP
PET117
KAT14
PLEKHG5
SLC22A2
FAM78B
TMEM17
POLDIP3
SLC38A3
NINJ1
GNAT1
TRMT2A
RANBP1
PHACTR4
FBLN1
SHTN1
NAB1
VAX1
SIAH2
PSME3IP1
TMEM63A
LEFTY1
RSPRY1
RRN3
AK2
LHX4
CA5A
ZMYND8
BANP
IGF2BP2
DEGS2
GPR37
SLC25A1
ALCAM
PPIP5K2
GIN1
SOS1
ARHGEF10L
STAT5B
ADAM22
MYO1G
XAB2
STXBP2
PCP2
ELAPOR2
PGF
ZNF160
TTC12
PLEKHH3
CNTNAP1
CCR10
TAF6
MBLAC1
CNPY4
TOGARAM1
KLHL28
PNPLA3
UMPS
UPF1
RPIA
NPTN
LGR6
CYB5B
IL17B
IKZF3
ASCC2
ZNF280A
RAB17
IGSF23
APEH
XPR1
GPA33
PJA2
LMNA
ZC3H10
RPL41
MEX3A
LPIN3
FIGN
MOK
MAP3K4
TMBIM1
CEP43
RREB1
SYNGR2
RNF5
AGPAT1
AGER
WDR7
SLC35F4
AMER3
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
MRC2
F8
TCAF1
TMEM181
SATB2
TTC39A
ZNF124
CADPS
EDEM1
MPP1
GRAP
ZFP36L2
RPP40
PDGFRA
GSTK1
RBSN
THAP9
SEC31A
POP5
SLC25A14
ODF2L
SPPL2B
LSM7
RIN3
STXBP6
SMIM12
MXI1
ACOX2
MTRNR2L1
HNRNPL
RAB11FIP1
ABLIM1
QPRT
FNDC3A
PDLIM7
SELENOP
RBIS
CAPN11
AEN
RNF214
PCSK7
ANPEP
RFESD
PTPRZ1
PPP1R27
MCRIP1
SIN3A
DIP2C-AS1
NUDCD1
GOLGA6D
NCS1
SULT2B1
CGN
MTFP1
FGF23
DISP3
ARHGAP42
KIF1C
INCA1
UBA6
PER2
CARM1
SFRP5
TMEM106A
TIMM13
MRPL52
GLB1L2
RASA3
ACTN1
UBE2V2
GPR132
RASL10B
KRTAP15-1
POLR2E
GPX4
OCIAD2
PTPRN2
ART1
REEP6
PCSK4
ART5
FAM102B
WIPF1
APOA4
RAPGEF4
FTCDNL1
ARL5A
PCLO
NDUFS6
MRPL36
ZNF763
PRKCSH
CCDC151
C1orf210
TMEM125
ZNF516
TMEM192
KAT6A
TMEM150A
RNF181
USP39
C2orf68
TUBB3
MC1R
LCN8
LCN15
ZFAND3
SMLR1
LOC102723360
RPL18
SIRT2
NFKBIB
CCER2
CLSPN
DENND1C
PHACTR2
DSC2
ZFYVE27
RPS15
INTS5
GANAB
KCNMB4
FAM120B
DLL1
PDE7B
MTRNR2L2
MSH3
DHFR
PPP4C
CBWD5
CBWD3
MSRB2
TFDP1
CBWD6
SLC9A3
CSNK1D
POLD4
CYTH1
TWF2
PPM1M
SAMD1
C19orf67
CPNE7
CST3
PUM1
IFFO1
TAF6L
OLFM1
POLR2G
PAX2
PEF1
GIMAP7
ZNF526
DEDD2
TRPC5
RTL4
FBN2
TBCCD1
DNAJB11
SCGB1D2
ZNF441
PCYT1B
ZNRF3
FPGS
MAST3
IL12RB1
RBM42
B3GNT2
GINS4
HOXB2
TRAPPC10
ZNF687
PADI2
MXRA8
DVL1
UCP1
PINX1
ABCC3
CDC42EP4
SPTBN2
ACSL1
NOVA1
OTOGL
TNIP1
VARS2
GTF2H4
SCOC
VWCE
USP37
CNOT9
TMPRSS2
RPL36AL
MGAT2
DICER1
IRF2BPL
PNKD
GPBAR1
AAMP
INTS7
DTL
CACNA1D
GPRIN2
OTUD4
CIRBP
ZNF230
PROZ
GGT1
NCOA4
WDR81
TLCD2
PIK3R2
RALGPS1
TGFBR3L
SNAPC2
CTXN1
LRRC75B
CNPY1
ABCC9
CYP2A7
GALNT2
PAX9
EDIL3
KIF5B
RBP5
CLSTN3
GAMT
DAZAP1
TUBG1
RETREG3
PTPA
CRAT
GPR107
BZW2
LRIG1
IGSF9
ANKMY2
BFSP1
DSTN
DOCK5
XYLB
ALDH5A1
ABAT
RIPK1