ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360584 | GP5d
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◣ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

ORC2
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
ISG15
HES4
RAB17
RGPD2
RGPD1
GPR35
MIA2
ATXN7L1
TACR2
PPIL2
TREX1
SHISA5
TMEM177
ECHS1
TNS3
C9orf64
FRG2C
UQCRHL
MTRNR2L8
PCGF1
LBX2
PKDCC
HNF1A
EPS8
ART1
ACY3
PCNX3
MAP3K11
GPA33
GNAL
CHMP1B
KIF5C
NSMCE1
EPN1
SLC35A3
TNRC18
LOC100129484
KIF21A
AFF1
GTPBP6
ETFA
SKIV2L
NELFE
SUCLA2
LRRC1
SELENOP
EMILIN2
CDH17
PAK4
FGFR3
APOBEC3A_B
APOBEC3A
LAMTOR5
SLCO2B1
KLHDC8A
DYRK2
PTPRN2
DOCK6
TNFSF15
RBKS
BABAM2
HMGCS1
RAMP1
RPS5
CXADR
MAMDC2
PAAF1
COA4
WT1
GET1-SH3BGR
GET1
ECE1
GAL3ST2
PSMD1
TM4SF1
NUMB
AGPAT2
POLR2E
GPX4
GPR137
TMEM54
ASAP2
CDC14B
CCDC90B
MGST2
VIL1
GRTP1
KCTD17
MTRNR2L2
MSH3
DHFR
COLCA2
TPCN2
TRAF7
RAB26
BIRC2
PGAP3
ERBB2
SULT2B1
CPPED1
PNMT
CLIP2
GGT1
MTRNR2L1
SPATS2L
CARHSP1
EPS8L3
IST1
PRKCSH
CCDC151
ARL14
MBNL2
SEL1L3
ERVW-1
EPS8L2
DEAF1
INAVA
SDSL
PKP4
CCDC148
GSTA3
DUSP18
ABLIM1
CPLX2
MYL12B
MYL12A
S100Z
RER1
MORN1
TATDN3
NSL1
COL8A1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
SERPINB1
INF2
KNL1
SLC46A3
ANK3
C1QTNF1
GOLPH3
TRIM72
PYDC1
CSNK1D
DSP
DNAJC22
REG4
IL20RB
SLCO4A1
AQP11
ALOX12B
LTBP1
GRM4
ZNF827
SPPL2B
LSM7
HEPH
SCAF11
CAB39
VIPR1
GAB2
SEC23A
SP1
SEPSECS
NRBF2
FEM1A
PDGFB
TNFRSF1A
OSBP
ZNF567
CBX4
BCL9L
WDFY2
VCPIP1
C8orf44-SGK3
KLHDC2
FMN1
CRY2
POLRMT
FGF22
AP1AR
ARHGEF10L
DEGS2
TNFRSF10B
ARHGAP27
LURAP1L
CACNB2
PRSS3
GSTK1
TMBIM1
MMADHC
TECPR1
TYMP
SCO2
ODF3B
NADK2
WFDC9
WFDC10A
JMJD1C
MYO1A
ENTPD1
ZNF789
ATP5MF-PTCD1
ATP5MF
OSER1
TSPAN3
COL23A1
STK24
SPON1
DENND2B
DCAF8L1
WDFY3
CDKN2AIP
SLC7A7
DHRS3
PABPC4
ZFYVE27
RIPK4
CDX2
CCDC71
NOMO2
NOMO3
ABCC6
DENND5B
ZNF214
NLRP14
ATP9A
EXT1
CDHR2
RNF44
PEMT
AHCY
DTX2
HEXB
C1orf74
METTL7B
SOS1
PHACTR4
ACSF3
TIE1
MVP
SYBU
CYP4F3
PDGFRB
CDX1
MUC13
TREH
PPP4C
C1orf174
USP2
SPINT2
CAMK2G
PIWIL1
ZNF764
TP53I3
SF3B6
FAM228B
SH3BGRL2
NPTN
TM4SF5
WDR38
RPL35
ARPC5L
VTA1
NMBR
TNIP2
CCL20
PRDM11
C2orf88
RUNX1
DUX4
B3GLCT
CCDC93
HOXC10
SYTL1
HOXC11
OCIAD2
KIF21B
MRPS18B
ATAT1
HRH1
HADHB
HADHA
PDE11A
MRPL40
HIRA
IGSF5
CRYBG2
LIF
PNKD
GPBAR1
AAMP
WDR97
MAF1
CYC1
ATE1
PTPRF
HGD
KDM6B
ACOX2
ADCY6
WASF2
NCOA4
SLC35D2
MICAL2
LASP1
PPP5D1
CALM3
SLC7A5
ZNF219
TMEM253
ZC3H12D
RAB5C
RIN3
TPCN1
SPAAR
HRCT1
CYB5R3
ATP5MGL
PRR5
PRR5-ARHGAP8
XRN1
ALAS1
MLXIPL
RAB43
SCGB1C2
RHOC
TSC22D1
TMEM45B
PPM1J
AHCYL2
ARHGEF39
CA9
SMAGP
NPDC1
ENTPD2
SPTBN4
ZFAND3
PITX3
GBF1
VPS41
NHSL1
ZSCAN22
TARBP2
NPFF
MAP3K12
IRF2BP2
C1orf210
ALDH3A2
PERP
MTA3
TTC31
CCDC142
TJP3
LSM14A
NME4
DECR2
MRPL53
TANK
DNAJC25-GNG10
DNAJC25
ALPI
CRYAA
CRYAA2
SPO11
GUCA2A
SDC1
TSPAN14
PLAUR
SCT
IRF7
CDHR5
WDR7
ZFP36
PLEKHG2
ZNF564
ZC3H4
SBF1
MIOX
ADM2
GRHL3
C15orf40
LGALS4
ZNF232
USP6
PGF
AGPAT3
ADD3
CDK3
NR0B2
NUDC
S100A16
S100A14
ITGA3
PCGF3
OCIAD1
NCOA2
PICALM
NR1D1
ZNF444
WDPCP
MDH1
SLC38A10
SIRT7
NPB
PCYT2
CRYBG1
PTK2B
AGT
TRIM35
NLRC5
CNNM3
PABPN1
PDZK1IP1
OPA3
TEP1
RPL36AL
MGAT2
GRIP2
SLC50A1
EFNA1
DTX4
TBXAS1
HIPK2
MPV17L2
ESRRA
CATSPERZ
SIN3A
GLYCTK
MGAT1
BNIP5
STX18
IL18R1
COBL
ZSWIM1
SPATA25
NEURL2
CTSA
PHETA1
NIBAN2
ZBTB40
AMOTL2
PHF12
CSTF1
AURKA
ERBB3
HMOX1
PTP4A1
CERS2
HAAO
SLC9A3R1
URGCP-MRPS24
URGCP
VTN
SEBOX
SARM1
NEK2
TMEM169
PECR
ZMIZ1
MYRF
SEC13
PDXP
MIDEAS
SIT1
CCDC107
PINK1
RAPGEF1
PANK1
SCRT2
NCS1
MORC1
NR1I3
MACC1
SOWAHA
GPR171
LOC390877
GTF2F1
NDUFS1
EEF1B2
ZBTB48
PPP2CB
ACSL5
GNAZ
SMPDL3A
DIDO1
SLC20A1
LHPP
USP18
PRR15L
ITPRIPL2
CREB3L3
PHLDB3
TP53I13
ABHD15
LENG8
NRL
DCAF11
PAF1
LY75-CD302
LY75
SMAD3
APOC3
MAD2L2
FBXO6
CCN2
GUCA1B
F10
SLC3A2
NMD3
PRKAG2
SH3D19
RAB37
APOA1
AP1M1
GCLC
PLEKHG6
AGMAT
TULP2
NUCB1
SRCIN1
SLC19A3
CNDP1
IL6ST
FUT5
IDH1
VHLL
TMEM79
SMG5
GLMP
CCND2
HNMT
PLXNB2
BRMS1
B4GAT1
F11R
IGSF23
FTH1
IDNK
NQO2
EDEM1
TRIB3
LIMK2
AJUBA
IQANK1
FAM83H
AKR1A1
PRUNE1
MINDY1
GPRC5C
VAMP8
VAMP5
SNRPD3
GUCD1
WSB2
BORCS7
CYP17A1
RHEX
DOCK5
NDUFA6
PRKCD
ITPK1
TDP2
ACOT13
PPIP5K2
GIN1
ID1
FN3K
SPHK2
CDR2
SIAH2
PDF
AHSG
DBP
SRSF11
LRRC40
POLD4
BPHL
WEE1
MYD88
ACAA1
PLOD1
PUS10
PEX13
TRIM15
TRIM10
COPS4
TESK2
MMACHC
CCDC163
ASS1
FBXO31
GDI2
GAB1
SFXN3
PDZD7
FCHO2
SDCBP2
GDF7
INPP1
GSE1
IGF2BP3
PET117
KAT14
LSM1
RABGGTB
PSMA5
GALE
DOK4
TIGD3
COMT
LIPE
GTF2I
CSF1R
EHD1
CFLAR
CERK
EXOC1
SPATA2
GLRX
LAMB1
NOMO1
PDLIM2
NQO1
KIAA2013
HDHD3
APOB
COL21A1
XYLB
RPS3A
RGS3
SCARB1
CCL16
FAM110B
MYO18A
SEPTIN4
CPNE5
ANKS4B
KIF1C
INCA1
KRTAP5-6
AFP
GPR142
SLC45A4
BAG4
TTYH3
BCAR1
DAND5
POR
APOA4
MMP24OS
MMP24-AS1-EDEM2
FAM83C
C19orf33
PER2
ABCC3
TBC1D22A
UBR4
TK1
BLOC1S5
TCP10L
TDRD7
FYB2
HIC2
CORO1C
SNRPA
C19orf54
LARP1
FUOM
TCIRG1
NDUFS8
SMARCD1
ASIC1
KRTAP5-7
MRPL2
KLC4
CUL7
FNDC11
GSDMD
MIDN
RAB5IF
CTDSP1
AGXT
MAN2C1
SEC24D
GIMAP5
GDF15
ATP7B
ALG11
PTK6
IL32
FAM107B
PPP1R27
MCRIP1
CP
ZSWIM3
ACOT8
IQGAP2
GJB1
MAN1A1
BRCA1
PTDSS2
ANO9
CBY3
RSPH10B2
RSPH10B
CA5A
SMIM19
SLC20A2
CARM1
DNAAF2
CFB
PLEKHB2
FAM168B
SH3GL1
FASTKD1
C11orf24
MOGAT3
ADAP1
CPNE7
WAS
SECTM1
IFNGR1
LRP1
STAT6
RAPGEF4
MRPL24
VPS25
NEK4
ITIH1
B3GNT3
TAS2R19
WNK4
EPHX2
KDELR2
OXCT2
NID1
ERICH3
HDGF
TKFC
DDB1
PRAP1
ZBED9
SRMS
ALKBH7
FITM2
PSPN
GNG4
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
DDAH2
CLIC1
LIME1
SPG7
F7
GAL3ST1
PALM3
PEPD
RBFOX2
TRIM47
PRDM10
GAPDH
PTK7
ITGB2
G6PC
PON2
HINT1
WDR81
TLCD2
VWCE
LTV1
CBARP
ATP5F1D
SPDYE14
SPDYE10P
LIPK
PCGF5
SEPTIN9
SERPINF2
POLR2C
TSPAN8
IL1R1
APOL6
H4C3
H1-6
CD2BP2
PDPK1
LMTK3
MOV10L1
PROCR
ZSCAN2
RAD50
C1GALT1
MYC
MMP20
BCL2A1
ABCD3
FAM169A
PRSS8
IRF2BPL
VPS54
ZFP36L1
ANK2
GIP
MRPL20
CCNL2
UCKL1
EFNA2
RCAN1
NFATC3
SDR9C7
SLC27A5
MMP15
LPP
JUND
IQCN
PRMT1
IRF3
BCL2L12
ADGRG1
DENND10
SLC2A9
DNMT3A
TRIM14
TECTB
PPEF2
MBL2
QPRT
RUVBL1
EEFSEC
ATP6V0A1
LOC102723996
ICOSLG
ELL
SLURP2
CLASP1
TRAF4
H6PD
DKK4
COL5A3
FOXA3
LRRC20
NCR3LG1
RASA4
TCAF1
PRXL2A
SF3A2
PLEKHJ1
PLA2G4C
FGG
EGLN1
ZFAND2A
NOL4L
SPOCK2
ATXN7
ENDOD1
ZNF184
C11orf86
ANXA9
OPTN
CCDC3
GNA11
KANK1
KIFC3
TADA1
SH3YL1
ACP1
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
WDR36
C3
DPAGT1
C2CD2L
TPT1
MTMR11
ADAMTS6
LOC100509620
DMAP1
GLI1
KHNYN
INHBE
CBLN3
CSRNP1
HSD17B11
MST1
RNF126
FBXO46
SLC39A14
TRIM26
NEU4
KIF5B
TAOK3
SUDS3
MESP2
CDIP1
HAGH
FAHD1
SLC25A5
DIP2C-AS1
SPTSSA
UBA5
ACAD11
MIA3
PLIN3
SCN9A
SEC16B
VEGFA
SMYD5
AKAP1
ZNF541
MRPL33
HCAR3
HCAR1
STX16
AKT2
TMEM270
CAPN2
C12orf43
NUDCD1
UBA6
CAPN3
TMEM150B
TNFAIP8L2
CEMP1
ZBTB46
ZNF710
LRP5L
COMTD1
TUBG1
RETREG3
MTIF2
RARA
CCL14
SERINC5
SARDH
DUS1L
KLF3
PLXNB1
CCDC51
CRK
NNAT
NET1
BLCAP
USH1C
OTOG
SLC2A14
HJV
CSNK1A1
SPTBN1
ABHD12B
SPRED2
POLDIP3
FKBP7
AP1B1
NHLRC4
GDA
PHC2
CIDEC
RBIS
TEX45
PEX11G
MYADM
FAM50B
LRRC3
CEBPG
TMCO1
IL4R
ZNF362
AMACR
TUBG2
PLXNC1
ASL
MTMR4
DENND1A
KMT5A
KHK
TMPRSS9
SLC38A3
RASA4B
DCBLD1
PC
ARHGAP18
SLC28A1
RXRA
GATA4
PNOC
RBP5