ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3401281 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◣ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GREB1
DNPEP
SLC45A4
TFF1
TPD52L1
HEXA
WASHC2A
MTRNR2L2
MTRNR2L8
LAMP1
WASHC2C
AP5Z1
RAE1
UBE3C
SLC4A2
MEF2C
SH3GL1
SUMO3
NEURL2
CTSA
ANKS6
GET4
ADGRB3
MIER1
DAZAP1
SHLD2
GLUD1
SUSD4
TNC
PTBP1
SLK
KCNMA1
FGGY
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
ADAM23
SMARCA4
ST7
CLCN7
ARHGAP32
STAU2
RALGDS
BLOC1S4
MYCL
ACVR1B
SBK1
NSD1
KAT5
NPEPPS
COMMD9
ARID5B
AP2A2
CLSTN1
TFDP1
RABGAP1L
GRHL1
FLYWCH1
SKIL
CBX7
STRA6
SAP30
PRKCA
UBE2E2
SFXN1
FASN
PPP5D1
CALM3
SPTAN1
KDM7A
TM2D2
ADAM9
CHD7
PLEKHF2
MINDY2
FBXL3
C17orf58
CHIC2
CACNA2D2
PHF21A
ACTN4
MRPL45
ZNF668
PATZ1
CFAP206
DIP2A
NDUFA4
PCIF1
IKZF2
DTNB
IGF1R
USF2
CUTC
COX15
SUMF1
PHIP
PRKCE
WBP1L
ATXN7L3
ADCY9
UBXN2A
LASP1
MSS51
FCHSD2
CABIN1
NFASC
IRF2BP2
EFNA3
C1QTNF1
ATP6V0D1
LYPLA1
OAZ1
KDM1A
PEAK1
HMG20A
SLC25A11
RNF167
UPF1
PTPRG
ZBTB14
BSG
CTBP1
SCYL3
LCOR
ZNF217
MELK
LYPLAL1
GAB2
CCDC88A
CBX6
PTBP3
MLLT10
MAZ
MRFAP1
CLN3
USP28
EIF4H
NUDT3
IFT140
CRAMP1
PKNOX1
PTP4A3
AUTS2
LIFR
GNB1
SPRTN
EXOC8
PVALEF
AATK
MAST2
SLC35A5
ATG3
STAT5B
RYK
TBL1X
PARD6B
TRMO
SMURF1
ARPC2
ATOH7
FEZ1
TMEM266
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
GFER
ZBTB18
PRMT3
C3orf70
AMMECR1
SNX19
ARRDC3
MDM2
BTBD3
AVEN
NEK6
GBA
SLC6A6
TCTA
RHOA
UBAP2L
C1orf43
EXOC6
SNX12
THAP1
SIAH1
RBKS
C20orf141
BABAM2
NAGPA
TSPAN7
PAPSS1
THAP12
GVQW3
LFNG
SRSF6
ZC3H7A
RGPD2
RGPD1
PPP2R3B
FZR1
ZNF787
UBE2E3
HP1BP3
RMND1
PTPRF
ARMT1
YEATS2
UBXN4
NSD2
DENND2B
ACACA
APBB1
MAPK8IP1
NCOA5
SGPL1
WWP1
RRAGC
AMOTL1
PXN
CPEB2
MYOG
FHL2
TAOK1
PSMA1
ABCA5
LARP1
TENT2
LGALSL
RBM14-RBM4
RBM14
SINHCAF
MCOLN1
SRCIN1
PPARGC1A
SULF1
ROCK2
DUSP6
AFAP1
DOK7
POLR2J3
GPAT4
FZD3
PWP2
LOC102724159
GPSM1
FRMPD1
GNA13
LRRC20
BAX
PPM1A
MRFAP1L1
AMDHD2
UBTF
HAGH
FAHD1
ZNF507
KLF16
MPP6
HSP90AA1
C15orf61
TP53BP2
PTK2
MCM9
MTHFR
CLCN6
UBE2Q1
SPEN
VPS33A
DENND1A
C12orf66
C10orf95
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
RNF152
OSTF1
NMRK1
HIF1A
SPCS3
PDIK1L
THUMPD2
MAP3K2
THOP1
SSBP4
DLGAP4
RUFY1
VOPP1
GNB4
SEMA3D
ASPH
MAP4K3
TADA2A
RXRA
CDON
DHX15
CLIP1
GRAMD4
HES1
TRMT2A
RANBP1
TMCC1
PRR7
ATXN7L2
TNNT1
LARP4B
FAM81A
ENTPD4
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
EPC1
DCK
SPNS1
LIMA1
SMARCB1
MAPT
FREM1
MAP4K1
EIF3K
HNRNPU
CXCL8
REST
METTL9
CDKL5
FAM168B
CAPZA2
PPP2R5A
SUZ12
CNOT8
NEO1
MADD
RAB6A
HNRNPH2
ATP2B1
ARHGEF12
LPIN2
ATP6V1G1
YTHDF2
SYNPO2L
PAIP2
CHD1
LRIG3
SPAST
MYO1D
PXT1
KCTD20
COMMD3-BMI1
COMMD3
MYBPC2
HRCT1
SRSF4
SFR1
TARBP1
RUVBL1
POLE4
EEFSEC
CRTC1
SLC22A10
SCAMP4
NEURL1
ADAT3
SLX4
RAD9A
PTAR1
NFRKB
PACS2
BRF1
IKBIP
APAF1
XRCC5
C9orf40
SPATS2
ARHGAP28
QRICH1
SSH1
RNF170
KIF1C
INCA1
HOOK3
B4GALT2
RRP1
PCID2
CUL4A
WDR45B
PPP6R2
GTF2I
JMJD1C
ZDHHC5
ZNF236
DGLUCY
MPP5
KDM2A
IFI44L
LCORL
ASXL2
EBAG9
ADARB1
CHEK1
OPN3
CHML
CBLN1
SMYD1
INO80C
THEM4
RARG
ANKRD26
DIPK2A
ATXN2L
NAPEPLD
SF3B1
LHFPL1
NDUFV2
MATR3
KLHL32
KANSL3
BLOC1S1
CCN2
CDK4
GFRA1
GPATCH8
MXRA7
ANP32E
TMEM40
TMEM167B
PTPN12
EFNA4
KLHL8
IFNAR2
ETV4
SRSF11
LRRC40
DRAM2
DGKZ
CEPT1
MFSD1
BCL2L13
LTBP1
PHC2
CREB5
ZZZ3
NKIRAS1
RNF187
STRN4
FKRP
SNORC
EPC2
HNRNPD
POLA2
CEP162
HERC5
RBPJ
NR3C2
UBE2Q2
DHRS13
CCDC171
BTBD9
PRKAB2
MXI1
CHD1L
NEDD4
FKBP1A
CDC73
ACOT9
STX16
PTMA
SREK1
CD47
ZNF318
ZBTB12
BTBD1
ZSWIM5
ARMH3
OPRD1
BRD3
PPP1R3D
FAM217B
HNRNPA2B1
CBX3
ST8SIA1
SMARCD2
CNN3
RYR1
RNF44
MIF4GD
SSBP1
SBK2
UTP23
COX20
UGCG
DISC1
AMIGO1
STAG1
TAFA5
LIMCH1
ARSG
ABLIM1
RAB10
CHRNA7
USPL1
HMGB1
FBXL17
SSTR5
ZNF185
CIC
BTG3
SPTBN4
DYRK2
TBC1D9
TPBGL
THOC1
FOXO3
EYA1
WDR87
SIPA1L3
CNKSR2
BCL2L1
SRI
UBXN2B
TBL2
LBR
ANKRD12
GMEB2
FSCN1
UGT2B10
LLGL1
FBXL16
TLK1
CUL5
PIK3AP1
TCF4
KLHL24
FANCC
TPM1
ABHD2
FAM189A1
AKAP1
MUSTN1
USP6NL
BSN
ULK4
ADM
PPP6R1
SYNGR1
PDS5A
HSF1
BOP1
TANC2
COPG2
BLCAP
ZNF652
RGS19
OPRL1
SOCS2
MAK16
KDSR
NFIC
DENND5B
ARID1A
HOXC13
RAD23A
ITGB3BP
INTS12
HECTD2
GSTCD
EFCAB7
TP53I13
ZNF821
TMEM145
ETNPPL
AGTPBP1
NR1D2
DUSP14
DNAJC5
KDM3A
TACC1
PTPRD
UBL4A
SPATC1L
PPP1R15B
ARHGAP5
MAPKAPK3
ZBTB8OS
SLC25A12
RBBP4
MAX
GABRA2
C2CD5
VPS11
TRIM62
TM7SF3
MAPK3
ISX
YPEL1
MCUR1
INTS10
E2F6
SOX12
MAST4
BCAT1
ZFP1
VTA1
TNNT2
NMBR
MEF2D
JPH3
HSPA2
FAM222B
GRN
ACSL4
CLN5
DYNC2H1
ADI1
SAXO2
FKBPL
EFL1
FBXO30
PAFAH2
SREBF1
ATP6V1C1
PLEKHA5
IFT43
CCNI
S100A2
MEX3B
KLF13
WDR74
TMEM39B
TMEM201
PPP1R3E
MRPS23
RNF144A
TOB1
UBE2D3
PRKAG2
HK1
GTF2B
GRK3
VEZT
FGD6
HDAC9
GFUS
ARRB2
TBC1D19
CLK1
C5orf24
KDM4C
ARL14EP
POLR2M
CSGALNACT2
COMMD4
GNL2
TBC1D1
AIG1
COP1
VHL
PDGFA
HPS5
GTF2H1
SLC25A22
N6AMT1
CDCA7L
SNRPB2
MYLK4
MEIS2
INSR
IFRD1
ERCC1
SRCAP
LOC730183
HDGFL2
ETS1
NAV2
TRIM55
TMEM170B
RCAN3
MINK1
INTS13
FGFR1OP2
VDAC3
TOR1AIP1
SNX10
DUSP28
ANKMY1
RAB3IP
BMPR1A
RASGRP3
GALE
SFMBT1
MAP3K7CL
USP31
PRKACB
NCAM1
ETAA1
ZCWPW1
TIGD2
MEPCE
KRT4
VGLL4
NOVA2
EPS8
SLC25A34
OSGEP
BDNF
APEX1
SUPT7L
SLC4A1AP
RPS7
LAMC1
ANKDD1A
KDM8
WASHC5
NSMCE2
MNAT1
CITED2
BCL7B
SMAD2
PRRT1
PAXIP1
ATP6V1H
MAP4
LRBA
KIAA1549
CDK5
CCAR1
UGT2B28
TUBD1
SFXN4
RPS6KB1
GCFC2
CCNF
MAPK10
SH2D7
RYBP
JMY
FZD1
BRD2
ZNF32
SAYSD1
USP30
KANSL1
CHAMP1
SCN3B
AFDN
UHRF1BP1
TBPL1
KLHL12
KCNF1
EVL
DDX19B
AARS1
TRPM7
MSL2
B3GALT5
ZNF771
STYXL2
MTSS1
GSKIP
ATG2B
AMPD3
ADRA1A
RALB
KBTBD2
ANKRD1
SUGCT
MPLKIP
CDC34
PIP4P1
CAPRIN1
ALDH3B2
PBRM1
GNL3
BARX2
PUM1
PIH1D2
NKAPD1
MTNR1A
MTCL1
SDHAF3
CCNG2
MYL5
ATP5ME
PIK3CB
FOSB
SUGP2
PTK6
CHMP7
ARMC6
MRPL53
MRPL44
KCTD7
PPM1E
RASA1
VAPA
RNFT1
INTS7
DTL
BAG3
ARHGAP22
TMEM100
PROSER1
NHLRC3
AGO2
UCHL5
RO60
MTF2
KAT6A
DYRK1B
AGO4
TYW3
POU2F1
MYO6
GRIP1
CRYZ
TRIB1
RPS6KA5
OR51T1
MILR1
CD99L2
MARCHF8
CRY1
CAMKK2
STS
PUDP
LRFN3
NR4A1
NME1-NME2
NME1
FSTL4
NUF2
RPUSD4
FAM118B