ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2A
HEXA
LAMP1
AP5Z1
KCNMA1
NEURL2
CTSA
TNC
WASHC2C
STRA6
ARID5B
GET4
SUMF1
KAT5
ZNF668
CLCN7
COMMD9
WBP1L
CLN3
C1QTNF1
RMND1
ARMT1
MSS51
RRAGC
PVALEF
AATK
TRMO
SEMA3D
MTHFR
CLCN6
MTRNR2L2
MYOG
FHL2
VPS33A
AMDHD2
NAGPA
ZNF507
DOK7
SLC35A5
ATG3
HAGH
FAHD1
FSCN1
ETV4
C20orf141
MTRNR2L8
SPNS1
SULF1
TBL1X
SYNPO2L
MEF2D
BAX
HNRNPH2
IFNAR2
ATP6V0D1
CLIP1
CEP162
TBC1D1
UBE2Q1
MXRA7
CDK4
HRCT1
TNNT1
CCN2
MYBPC2
INO80C
TMEM167B
FREM1
GPSM1
ACOT9
MCOLN1
ABLIM1
AFAP1
BLOC1S1
CREB5
CDCA7L
NR4A1
CHD3
CNN3
OPRD1
HHIPL2
ABHD2
HES1
MFSD1
DGLUCY
HOXC13
LFNG
SERTAD2
RYR1
EYA1
HNRNPD
TRIM62
ATP13A5
VPS11
HPS5
GTF2H1
ETS1
KDM1A
MINDY2
HERC5
GUCA2A
FAM110A
INTS12
GSTCD
AMOTL2
SMYD1
SMARCD2
TRIM55
ZNF609
CCNI
POLR2M
SBK2
TXLNB
SCN3B
CITED2
YBX3
ZAR1L
BRCA2
DUSP5
TBC1D9
SPATC1L
ATP6V1C1
KAZN
MAST4
OSGEP
APEX1
BLCAP
WASHC5
NSMCE2
GRN
KDM3A
TNNT2
TBC1D19
PGS1
HMX3
COMMD4
ZBTB18
PPP1R3D
FAM217B
MNAT1
INTS10
KCNF1
DUSP6
NCAM1
RIN2
ITGB3BP
EFCAB7
SLC4A2
CDK5
DYSF
ATP6V1H
SNRPB2
KDSR
ZNF32
CXXC5
CUTA
MRPL44
S100A2
ARID5A
TCEAL7
LACTBL1
ARID1A
ATP6V1G1
SSX2IP
TCF4
PIP4P1
FAM240C
LTBP1
SUPT7L
SLC4A1AP
MSMO1
CAPS2
RAD9A
KANSL3
MYL4
FUT10
USPL1
HMGB1
SSTR5
INMT
CFLAR
EPHA3
KLHL12
C2orf49
VASH2
TXNIP
MTF2
PEX3
ADAT2
GFRA1
LIMCH1
RGS3
RBM28
METTL7B
GTF2B
PROSER1
NHLRC3
MARCHF8
KANSL1
PSMD3
MAPK10
SSBP1
NAV2
STYXL2
MYLK2
ZNF292
NDUFA4
RPUSD4
FAM118B
VPS50
HEPACAM2
SLC25A34
PELO
ITGA1
CCNG2
ICE2
SELENOH
PTPRD
TPP1
TBC1D30
GNS
ELOVL6
COLEC12
MRPS23
SHB
SH2D3C
EFNA1
OSBPL7
ANKRD12
MUSTN1
SUGCT
MPLKIP
CHMP2B
ILF3
RCBTB1
MDM2
IRF2BPL
DES
RBPJ
TACR3
CALM2
HMGCS1
CRBN
IPP
RNASEK
SMAD3
MC2R
MTRF1L
IRF9
HES6
PPP6R1
E2F6
FOSB
INKA2
DDX20
ECH1
SYTL3
ALLC
PAFAH2
TBPL1
NAGLU
NAA38
STMN1
RASGRP3
SH3BP4
PLEKHD1
PMEPA1
MYLK4
ZBTB40
THOC1
ACHE
NOXO1
BHLHE40
CDC42EP3
AZIN1
VGLL3
PTK6
SSBP2
TSR3
GNPTG
C5orf51
AMPD3
COPS4
CGGBP1
C3orf38
ARHGAP24
COMMD2
SRSF7
PDE4DIP
ATP8A1
UTP18
RBSN
MBTD1
ARFGEF2
G6PC3
MAMSTR
PSIP1
WWOX
TTC9
CDK5RAP1
PKM
ZNF217
UVRAG
AASDH
BCAT1
FZD1
NUP107
METTL9
ANKRD1
HIF3A
OTUD7B
CTHRC1
TOR1AIP1
BEST3
PELATON
LZTS2
VTA1
NMBR
SREBF1
RPS7
TSPAN33
STING1
SHPK
CTNS
TRIL
DVL2
SH2B1
SLC24A1
INTS14
NFE2L2
CHRNA1
MAP3K7CL
GTF2A1
KDM4C
MTFR2
APP
GRAMD4
ARSG
RPL27
TTC26
USP15
RBMXL1
KYAT3
YARS1
S100PBP
SYT7
HSPB7
SAV1
RTN2
MADD
RARB
SYNRG
NACA
NDUFV2
TRIM72
ELAC2
PFDN4
PUM3
NBPF1
RPS12
NRAS
ACVR1
SPATA9
RHOBTB3
DYRK1B
KYAT1
FSD2
USP30
DUSP10
BRF2
SLF2
ANKRD40
TNFRSF19
WBP4
ELF1
NEBL
COX16
RAB5B
UGGT1
ST7
TMEM100
NUF2
MTBP
MRPL13
WDR11
IMPACT
IL21R
CPA1
TNNC2
NEXN
CCDC107
AAAS
ZNF335
POMZP3
NOTCH2
MRPS31
ZBTB26
RAMP1
GSPT1
CAV3
ARL14EP
THAP10
LRRC49
MCM6
DEPTOR
MYL12A
LRRC17
DRG2
TM9SF4
ZNF654
TSFM
PRR5-ARHGAP8
PRR5
MRPL34
DNAJC25-GNG10
DNAJC25
KAT6A
NME1-NME2
NME1
RTTN
ZNF572
KIAA0895
IKBKG
ANLN
CCDC88A
KDM8
LOC389831
ATP2A1
RARA
ATP6V0B
JMJD1C
MTERF1
GOSR2
NKIRAS1
NR1D2
STAT3
ZSCAN30
RGMB
PRKAG2
ZCCHC4
KLF7
FLOT1
MSL2
MYO18A
ASB18
HRC
NFIB
GPRC5A
THAP5
DNAJB9
TMEM242
SNRPB
MAST2
STX16
HDAC9
SYTL2
PBK
MEMO1
RHOJ
TEFM
GBA
ARMC8
CDK6
FAM185A
KLHL32
AIFM1
NDUFAF4
TOP3A
SMCR8
SETD3
INO80B
CCNK
AP3S2
MMADHC
VPS13B
SH2D7
NAPA
ATR
RPL5
PLEKHM3
WDR75
TNFRSF12A
PLSCR1
CBLL1
CDON
MTHFD2L
SF3A3
MPHOSPH10
MCEE
TBL1XR1
SEMA6A
RPN2
RBL1
PIKFYVE
PALLD
MROH8
DCLRE1B
CASZ1
AP4B1
SLC33A1
AXL
PNKD
PCNX4
EPM2A
ZCCHC3
RCAN1
ARHGEF6
PTK2
MTMR14
TERF1
RUSC2
PSMB7
LAMTOR1
CLK1
LRRC58
PGM5
BET1
NPEPL1
VMP1
PTRH2
PDZRN3
DMAP1
COMMD8
PCOTH
MIPEP
PRDX6
POLDIP3
DDX1
FITM1
KCTD9
CDCA2
POLR1F
PLAAT5
NSUN4
H2AZ1
COL12A1
ELAPOR2
RFC1
TMBIM4
ATF3
SLC25A32
DCAF13
TTI1
RPRD1B
LEFTY1
ARL8B
SULF2
USP37
THRAP3
MFAP4
IRAK1BP1
FOS
CNOT9
HELB
EIF2B3
MTREX
DHX29
NLK
KIAA1522
AIG1
PLS1
CRNKL1
CFAP61
KLHDC10
HBS1L
SGIP1
WDR36
TRIB3
SLC1A4
SDHD
RBM24
LRTM1
GTF2H2C_2
GTF2H2C
BDKRB2
ACSL3
OSBPL9
OBSL1
MRPS5
INHA
HSPBAP1
CALD1
FAM200B
ZC3H15
XKR7
USP47
MFAP3L
ID1
EML2
CXCL3
LRIG3
NKAP
TRIM32
IARS1
BMPER
ASTN2
APBA1
SVIL
SERPINI1
PDCD10
PAXBP1
DDX18
GBE1
TUBE1
STX5
SECISBP2L
KRTAP4-1
HOMER3
GRPEL2
FAM229B
CTBP2
CSTF1
CAP2
AURKA
HIBCH
STX18
MEGF10
DCTN1
SLC30A6
METTL3
UBXN4
C12orf66
DENND2A
RAB18
ARNT
TGFBR2
UBE2B
PDCD11
PALB2
NPAS4
NDUFB5
MRPL47
HMGCR
FAM200A
DCTN5
CDKL3
ATP5MD
SDHAF3
PLS3
ZMIZ1
UBC
SS18
SLC51B
RPS6
PDSS2
DOCK7
CSRP1
POLE4
MAPKAPK3
PGM1
DPH5
CCDC7
RPL11
YTHDC1
TRAM1
PIGL
PHACTR2
ECHDC1
CYP2U1
CISH
CACNA2D4
PIH1D2
NKAPD1
ZCCHC24
RXYLT1
ZNF790
MRPS15
ITGB1
CCSER1
UBE2D3
FLRT3
IMPDH1
CCDC174
TPM2
STK36
RNF25
DAB2
CCNC
NOTCH2NLA
VPS45
PSME3
NYNRIN
NOTCH2NLB
MED28
TAMM41
OXNAD1
DPH3
CLDN12
ZSWIM7
WASHC4
TTC19
STRIP2
ERGIC2
PPCDC
CHRNG
TAOK3
RUNX1T1
NUB1
NT5C3A
GRWD1
N4BP2L2
KRT80
MCL1
TRDMT1
SEPTIN9
RTCA
PMAIP1
PIGC
NUDT9
AAR2
NFIA
CNOT2
RBMS1
RNF6
SLC26A11
SGSH
PTDSS1
MTERF3
HECA
AMOTL1
PRKAB2
CHD1L
TCTE3
ERMARD
MED18
SLC38A2
HIPK1
CBWD5
ZNF780B
ZSCAN9
ZMAT1
PXDNL
MMAA
LOC100996750
KRTAP4-7
EIF2S2
ATF6
ZNF397
CLUAP1
ZNF484
IST1
C21orf91
SRI
ETAA1
POLR3F
DZANK1
MYL12B
RTN4
GNG11
POGLUT3
CAMK2D
AHI1
ACTR3
NUP42
CACYBP
ZCWPW2
AZI2
THAP9
SEC31A
SIKE1
NCSTN
NANP
IGFBP5
HIKESHI
COPA
ACOT11
BRD4
CPED1
PNISR
ZNF407
SETBP1
PYURF
PIGY
PELI2
NFATC2
NDUFS7
HERC3
FERMT3
CLASP1
C10orf88
SP2
ZNF155
STX17
SASS6
PRR29
PEF1
FGGY
ATP5F1E
SETDB1
DTNA
ANGEL1
SP9
SLC36A1
RIOK3
RAB30
NXPE3
MTX2
AURKAIP1
ATF7-NPFF
ATF7
DENND2B
RAB3IP
HBP1
VIPAS39
TOMM34
TIMM10
STK17B
SPRYD7
RECK
RAD18
PTPN21
NFXL1
MAN1A2
C8orf37
AHSA1
B3GALT5
GCLM
RFC3
ZSWIM3
ZNHIT6
VCPIP1
UTP25
POLR1B
PIPOX
MRPS18C
HELQ
DUSP3
DCTN6
C8orf44-SGK3
ANKRD53
ADGRL1
ACOT8
SKIL
KRTAP5-3
TP53RK
ZBED5
UQCRB
TPRA1
SUCLG1
SCFD1
RPL9
NUFIP2
MPG
MORC2
LIAS
DR1
CNOT4
ARHGAP29
TYW3
CRYZ
WDFY2
HUS1
THAP6
CCDC138
TNK2
TAGLN3
STT3A
SHISA2
SH3BP2
KCNH8
H2AZ2
CDC25B
BRAF
RRN3
DARS1
CCDC146
CEP120
UFM1
CTNNB1
ZBTB38
TMEM106B
TACO1
OSBP
METTL18
MEGF9
FBXO10
FAM186A
EMC2
DSTYK
CWF19L2
CCDC102B
C1orf112
BLOC1S5
ANKRD65
ALG10B
CCDC171
CAND1
SS18L2
SNX5
SEC22C
NFATC4
MGME1
GPR39
DNAJB2
BCAP29
ROCK2
SOCS2
SEMA3C
SLC25A26
CBWD6
CBWD3
ERLIN1
FRS2
TBCK
SQLE
SF3B6
SF3B5
SDCBP
RBBP8
POT1
JUN
IMMP1L
FAM228B
ELP4
CSNK1G3
AIMP1
THAP1
PSMA1
POLR2J3
ARHGEF12
NUCKS1
ODF2L
RPL31
CDC7
PEX2
TRMT6
MCM8
TPK1
SLC35A1
MYCBP2
POMP
VPS72
VPS25
SLC25A36
SEPTIN2
RHOBTB1
POLR3D
PLCXD2
MDM4
KLHL40
HDLBP
FBXO48
ETV1
APLF
ANO6
THUMPD3
ADGRL2
RPL37
TOM1
MRPS10
MED13
MAPK1IP1L
FUCA2
CHCHD3
AHCYL1
ADNP
ARHGAP28
NAPEPLD
CCDC15
EIF2D
SKAP2
SELENOI
RPL23
PHTF1
NAA16
MTRF1
ICAM2
CLTC
CEP41
CD55
C12orf73
ADGRF3
UBB
TNPO3
GSN
TMEM64
CCNT1
ING3
STARD3NL
YAP1
TTC21B
SRP19
RPF1
IDNK
CMSS1
CFL2
BZW1
BIRC2
SLC44A1
ALK
NUDCD3
C17orf75
SGO1
ZNF684
RPL15
RPL21
POLR3B
EHBP1
ZSWIM4
ZMYM5