ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
HEXA
MTRNR2L8
LAMP1
WASHC2A
WASHC2C
AP5Z1
NEURL2
CTSA
TNC
MSS51
ZNF668
CLCN7
WBP1L
ARID5B
C1QTNF1
AFAP1
KCNMA1
SUMF1
ZAR1L
BRCA2
GPSM1
KAT5
STRA6
C20orf141
TRMO
PVALEF
AATK
OR51T1
GFRA1
COMMD9
ATP6V0D1
CLN3
SLC35A5
ATG3
LTBP1
SULF1
FCRLA
GBA
TNNT1
FREM1
MYPN
GET4
SMYD1
CLIP1
FHL2
MYOG
DOK7
MUSTN1
FLCN
HDAC9
TBL1X
HAGH
FAHD1
B3GALT5
ARL14EP
MYBPC2
ZNF507
AMDHD2
HRCT1
PTPRD
TCF4
MFSD1
PAFAH2
SH2D7
NAGPA
BLOC1S1
RRAGC
SBK2
MAP3K7CL
SPNS1
SMARCD2
VPS33A
NDUFA4
HNRNPH2
TBC1D9
KDSR
MYLK4
BAX
RPS7
CREB5
ITGB3BP
EFCAB7
RASGRP3
RYR1
ANKRD13A
UBE2Q1
BLCAP
SYNPO2L
FLRT3
ANKRD1
RMND1
ARMT1
FAM200B
CCN2
TMEM167B
SLC44A1
ALK
HES1
UCHL5
RO60
KANSL3
AMPD3
INTS10
OPRD1
NAV2
SSBP1
KDM3A
S100A2
PPP6R1
CDK4
ACOT9
EYA1
MYL12A
SLC25A34
NPEPL1
SPATC1L
PTK6
MXRA7
CNN3
TNNT2
NAPA
G2E3
ZBTB18
ACVR1
VTA1
NMBR
SREBF1
RBPJ
MAST4
MINDY2
SEMA3D
MAPK10
INTS12
GSTCD
YARS1
S100PBP
MCOLN1
SSTR5
RGS12
CGGBP1
C3orf38
LRRC17
SYTL2
TLN2
USPL1
HMGB1
KANSL1
MYO18A
ZCCHC24
SNRPB2
ATP6V1C1
STYXL2
ZNF335
ABLIM1
G6PC3
ERI1
RPA3
KDM1A
SUPT7L
SLC4A1AP
CCNG2
NUDCD3
BCAT1
BTG2
SYTL3
PPIP5K2
GIN1
ABHD2
MTBP
MRPL13
TBC1D19
KLHL12
SERP1
EIF2A
IFNAR2
PPP1R3D
FAM217B
MED18
PBK
COMMD4
UTP3
MAMSTR
DZIP3
CIP2A
SEM1
ODF2L
HOXC13
TACR3
SSBP2
TDRP
TNPO3
CASD1
ST7
RAD9A
TNNC2
MTHFD2L
TANK
WRN
PURG
CEP162
VPS11
SLF2
TMBIM4
MDM2
NCAM1
VAMP5
TRIM62
CCNI
ASB18
FIP1L1
PROSER1
NHLRC3
ATP6V1H
CCDC174
COX7A2
RAP1B
PCBP2
MAP3K7
ANKRD12
NOXO1
NUP42
RRAS
PSMA5
THAP1
PIP4P1
MTF2
RPUSD4
FAM118B
CDC42EP3
AZIN1
SLC4A2
CDK5
MARCHF8
RRP15
ZNF32
TPP1
CHMP2B
RBM48
PEX1
DVL2
AFF1
WDR11
CRYAB
E2F6
GTF2B
CACYBP
FITM1
CAND1
MNAT1
UVRAG
RRN3
SMAD3
SPATA9
RHOBTB3
LRRC58
PPP4R3B
DARS1
TSPAN31
MUSK
PLEKHS1
GRN
DNTTIP2
DBF4B
MSL2
UBB
SH2B1
RXRG
STAT1
RBMS3
PIH1D2
NKAPD1
SF3A3
CHRNG
THAP10
LRRC49
LOC389831
ARMC8
WBP11
C12orf60
FANCC
VGLL3
AP3S2
KCTD9
CDCA2
NFIA
RPL22L1
PEX3
ADAT2
SH2D3C
NAGLU
THUMPD3
PPM1D
LFNG
POLR2M
PPCDC
DENND2A
RTKN
SH3BP4
TTC30A
TUBA1B
ATP6V1G1
N4BP2L2
CCDC146
KCNF1
PFDN4
MYL12B
KRTAP5-3
MTMR9
EXOSC8
OSGEP
APEX1
WASHC5
NSMCE2
INMT
TPM2
PNPT1
LOC100421372
HSPA14
CDNF
KYAT1
POMZP3
ZNF212
TP53RK
CDC7
CCDC15
ERCC6L2
MATR3
HNRNPD
MRPL44
PLEKHD1
JMJD1C
EPS8
TBC1D30
GNS
TSR3
GNPTG
SELENOT
ATP6V1E1
RBBP5
ZNF143
THADA
KLHL41
FREM2
VPS50
HEPACAM2
ANKRD40
COX16
SGIP1
NKAP
NUP205
SLC35E2A
STK36
RNF25
SLC25A26
ZNF644
STXBP5
MTMR14
MOB4
C2orf49
POLR3F
DZANK1
NUP107
OTUD7B
TAMM41
TMEM230
ARHGAP24
SCAF11
DAB2
WASL
HSD17B11
XRN1
MC2R
COMMD2
HRC
SGO1
KLHL7
INO80C
DCAF10
COMMD1
TRIM55
CITED2
BEST3
KRT80
ZNF397
ATP5F1E
TMF1
FANCD2
SMARCE1
MEF2C
NUF2
MTERF1
PUM3
MMADHC
SETDB1
KAT6A
RHOJ
SLC38A7
NKIRAS1
ZSCAN30
TNFRSF19
ARNT
ZNF684
RPL15
SHPRH
WDPCP
MDH1
PNRC2
FAM240C
TCTE3
ERMARD
NEXN
EPM2A
WARS2
ARID1A
HPS5
GTF2H1
RPL27
RTN4
FAF1
GPN1
CCDC121
KANSL1L
CRBN
TTC26
RAB5B
PCOTH
MIPEP
CFAP69
ZNF830
ZNF343
RESF1
CCT6B
MTFR2
CEP120
METTL15
KIF18A
ATP5MC1
TBPL1
ICE2
CCAR2
NOTCH2
ATR
SLC38A2
ZMPSTE24
ZBTB6
DDX5
UBXN2B
CHMP7
C3orf14
EPHA3
ZNF292
TRMT5
SLC38A6
MFN1
DMPK
CYCS
STX16
THOC1
CXXC5
DTNA
THAP6
DMAC2
EIF4A2
NDE1
MARF1
FDFT1
C5orf51
PSIP1
CCNC
CPED1
PEX2
OGFRL1
PUS10
PEX13
KRR1
TMCO1
CCDC59
SUGT1
SEMA3A
NXT1
LIMCH1
ELOVL6
IPP
INKA2
DDX20
HFM1
TOMM5
CDC37L1
MEF2A
HBS1L
CALM2
HSPB7
TM9SF4
LEMD3
VAMP4
KRIT1
ANKIB1
ZCWPW2
AZI2
OPA1
DMTF1
ANKRD50
RFX3
PREPL
ERLIN2
CAMKMT
ALG9
NBPF1
ZCCHC3
TRMT6
MCM8
SPAG8
RPS12
HSPE1-MOB4
HSPE1
HSPD1
OXNAD1
DPH3
GNG11
GCLM
SHOC2
BBIP1
ZFAND5
NFIB
CNOT2
NUP54
HOMEZ
BECN1
AP1AR
RARB
SERPINI1
PDCD10
TMBIM6
MST1
ATG4C
ZER1
RAB11A
ANKRD18B
MRPS23
CFLAR
HBP1
SLC35A1
ZNF780A
SERBP1
TYW3
CRYZ
NME1-NME2
NME1
SLC33A1
GMNN
CCN1
COMMD3-BMI1
COMMD3
SCN3B
DHX8
ACHE
ELAPOR2
RBMS1
HIPK1
UFM1
ADGRL2
FRA10AC1
PACRGL
FAM98B
PDAP1
BUD31
STARD4
PHF5A
MAP3K13
LARS2
ACO2
FZD1
COPS4
MTRF1L
SLC24A1
INTS14
SULF2
MYCBP2
RPL21
ZCRB1
PPHLN1
PTPN1
RPL5
CLDN12
CBWD5
HNRNPDL
CTNNAL1
APBB2
ETV4
ALLC
NRAS
ING3
COX10
TAF13
MAGI3
DUSP6
NDUFV2
AIFM1
PLEKHM3
ZRANB2
PARP2
NDUFAF5
ESF1
PPIG
DGLUCY
GPATCH8
RPS6KA5
THAP5
DNAJB9
STARD3NL
NEMF
ANO6
LDHB
CSDE1
DLAT
TRIM45
SMG8
PSMC2
EMSY
MTHFR
CLCN6
YTHDF2
STAG1
RIN2
SLC35D1
SLC9B2
SCNM1
LYSMD1
NUDCD1
NAA38
USP15
ATP2A1
TOP3A
SMCR8
CCDC169-SOHLH2
CCDC169
AGBL3
PCNP
HACL1
BTD
KDM5A
CCDC77
TFPT
PRPF31
CRNKL1
CFAP61
MKRN2
FOXJ3
GTF2A1
PLSCR1
PLS3
DPH5
ZNF780B
DNAJC24
DCDC1
EIF2AK3
SNIP1
SECISBP2
PIGK
TSEN15
CBLB
PIGF
CRIPT
CCDC43
HUS1
RNF6
CBWD6
CBWD3
EHBP1
PPP1R8
TTLL4
CTH
PRKACB
KDM8
PRDX6
CCDC7
ZNF112
SRRM1
DBT
INTS9
HMBOX1
MTIF2
MRPL1
BRIP1
TAF7
TEFM
POMP
PNO1
ZNF226
HMHB1
GNAI1
METTL7B
RBM7
C11orf71
MRPS31
SCAND1
PTCD3
POLR1A
CAVIN2
SLC2A12
WWP2
TUT4
PGS1
CDK6
ERLIN1
SLIRP
ALKBH1
WNT2B
RNF103-CHMP3
RMND5A
USP16
RHOT2
RBM12
PAPOLG
GSTA4
GINS1
CPNE1
AGPAT4
CCAR1
SUGCT
MPLKIP
POLI
RAPH1
RPS29
CDK11A
RPL24
OAZ3
MRPL9
BMT2
TTC23
RNF20
LRRC28
UBXN4
USP30
SAV1
RTTN
RAB32
GBE1
NOTCH2NLA
TRMT10C
SVOP
RPS3A
KRCC1
NCOA5
ETAA1
VPS45
MCL1
CLUAP1
TAF1A
POLR2K
OSBPL1A
CEP128
LRIG3
UTP23
HELB
ZBTB40
DNAJC19
KIFAP3
TMEM242
MTREX
DHX29
CTNNB1
SRBD1
TMA16
GOLPH3L
ZC3HC1
SLC10A7
GAR1
FBXO4
CYB5R4
VPS26C
MED4
SRSF2
MFSD11
WDR77
ATP5PB
BAZ2A
GPRC5A
THAP9
SEC31A
LSM8
C2orf73
TRMT61B
PLK2
NCAPG
MXD1
SP2
CCDC138
SMIM12
MIB1
DYNC2LI1
MYL4
PGM5
RFC3
NDC80
METTL4
SMAP1
DYRK2
RPL11
CSTF2T
FAM3C
USP42
PRPF38B
PPIH
RLF
EYA4
PRKAG2
TOR1AIP1
OSBPL7
TNKS
FAM133B
CHD8
CENPE
RBM22
OSER1
CBR3
PHIP
APBA1
SLC25A32
DCAF13
ZC3H15
PNISR
FAM171B
TMEM209
SCRN3
PPM1B
CIR1
SMCHD1
FRS2
UGP2
MKLN1
ZNF586
PSMA2
MRPL32
PSMD14
CADM2
CEP350
SPOPL
SCYL3
SSX2IP
TMEM101
PHYHD1
NUP35
CBX2
RTL8B
ROCK2
VIRMA
RSRC1
PROS1
NBEAL1
CDCA7L
RPL37
EXOC4
RXYLT1
CEP70
SUPT20H
HERC5
ABCD3
ITPRID2
DERA
ZCCHC17
SNRNP40
FAM126A
RPAP2
GLMN
MITD1
TIPARP
PRRC2C
ZZZ3
RAE1
UBE3C
SH3GL1
SUMO3
ANKS6
ADGRB3
MIER1
DAZAP1
SHLD2
GLUD1
SUSD4
PTBP1
SLK
FGGY
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
ADAM23
SMARCA4
ARHGAP32
STAU2
RALGDS
BLOC1S4
MYCL
ACVR1B
SBK1
NSD1
NPEPPS
AP2A2
CLSTN1
TFDP1
RABGAP1L
GRHL1
FLYWCH1
SKIL
SLC45A4
CBX7
SAP30
PRKCA
UBE2E2
SFXN1
FASN
PPP5D1
CALM3
SPTAN1
KDM7A
TM2D2
ADAM9
CHD7
PLEKHF2
FBXL3
C17orf58
CHIC2
CACNA2D2
PHF21A
ACTN4
MRPL45
PATZ1
CFAP206
DIP2A
PCIF1
IKZF2
DTNB
IGF1R
USF2
CUTC
COX15
PRKCE
ATXN7L3
ADCY9
UBXN2A
LASP1
FCHSD2
CABIN1
NFASC
IRF2BP2
EFNA3
LYPLA1
OAZ1
PEAK1
HMG20A
SLC25A11
RNF167
UPF1
PTPRG
ZBTB14
BSG
CTBP1
LCOR
ZNF217
MELK
LYPLAL1
GAB2
CCDC88A
CBX6
PTBP3
DNPEP
MLLT10
MAZ
MRFAP1
USP28
EIF4H
NUDT3
IFT140
CRAMP1
PKNOX1
PTP4A3
AUTS2
LIFR
GNB1
SPRTN
EXOC8
MAST2
STAT5B
RYK
PARD6B
SMURF1
ARPC2
ATOH7
FEZ1
TMEM266
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2