ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

RAE1
SLC45A4
DNPEP
PIK3AP1
TENT2
NUDT3
FRMPD1
SLC22A10
GALNT18
CXCL8
TMEM40
JPH4
RUVBL1
EEFSEC
TIPARP
BCL2L13
IFRD1
UGT2B10
MAX
ULK4
DAAM1
KRT4
ANP32E
JPH3
PPP1R15B
NFIC
ERCC1
ATP6V1G1
DHX36
DUSP6
VSTM5
ZBTB18
PRRT1
ISX
TMEM204
DDX19B
AARS1
ATXN2L
IFT43
LGALS7B
TMEM100
CLDN8
FKBPL
POLR2J3
WDR74
NOVA2
ARHGAP22
UGT2B28
ARHGEF38
GABRA2
TLK1
ZNF771
TMCC2
CYP3A43
RGL3
BDNF
TMEM237
SLC29A2
IGFBP1
HDGFL2
MTRNR2L2
MAPKAPK3
TRIM49D2
TRIM49D1
MKS1
PDGFA
ITPRID1
SLC30A4
UGT2B11
PHGR1
IFNLR1
ALDH3B2
KCTD7
TPT1
PRDM1
LBHD2
GAPDHS
DECR1
SMIM13
MACROD1
CDKN2AIP
SAXO2
EFL1
PHF19
MTRNR2L8
FAM222B
STK32A
TASOR
SIN3B
NEBL
ATXN7L2
VAT1
MILR1
SLAIN1
CMTR2
PFKM
SCAMP2
WIZ
ZNF341
SNX16
CDKN1A
WASHC3
EDN3
C3orf14
TTLL12
CPLX1
C4orf51
HIVEP1
TTC7A
PHACTR4
MCFD2
PYCR2
PAX6
SCIN
INPP5K
C1orf116
SYK
CCN5
TRAF3IP2
NME4
USP30
ZNF287
WRNIP1
LMOD3
LOC114841035
FKBP2
TMPRSS11F
SAMD12
SHF
TRIQK
UNC80
MYH10
SRRM4
SPIDR
MOGAT2
SOCS2
ZNF547
TRAPPC2B
MTNR1A
COPRS
RGPD2
RGPD1
HSPA12A
ENO4
MNS1
HOXC6
CDK3
ADGRG7
SNAI1
G3BP2
BBS1
PIH1D2
NKAPD1
ATL3
THAP4
STX16
FAM107A
FZD1
XKR9
LACTB2
RHOH
REP15
NFKBIA
DRG2
DDX39B
CYTH1
FAM214A
SIRT4
NME1-NME2
NME1
DHRS13
BCAR3
ZG16B
MAD2L1BP
GTPBP2
GREB1
DNAH5
SYVN1
FAM107B
TJP2
KRTAP9-6
PMVK
MAP3K6
H4C2
CDHR3
C9orf152
SUGCT
MPLKIP
HERC5
MRPL21
IGHMBP2
SMOX
CHMP4C
RGS3
LFNG
NBR1
SREBF1
LPCAT3
H4C3
ADAMTS3
ST3GAL6
TBPL1
MED30
RP1
DNASE2B
ZNF200
C11orf24
GOLPH3
ITPR3
OSBPL6
MPHOSPH10
MCEE
IL20RA
VPS13B
ATL1
MAP4K5
WDR55
SMAD4
IMPA1
SKIL
UBB
HEXIM1
ANO6
DPY19L4
RPS27
RNF115
UNC5A
MB
IWS1
HEXA
WASHC2A
LAMP1
WASHC2C
AP5Z1
UBE3C
SLC4A2
MEF2C
SH3GL1
SUMO3
NEURL2
CTSA
ANKS6
GET4
ADGRB3
MIER1
DAZAP1
SHLD2
GLUD1
SUSD4
TNC
PTBP1
SLK
KCNMA1
FGGY
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
ADAM23
SMARCA4
ST7
CLCN7
ARHGAP32
STAU2
RALGDS
BLOC1S4
MYCL
ACVR1B
SBK1
NSD1
KAT5
NPEPPS
COMMD9
ARID5B
AP2A2
CLSTN1
TFDP1
RABGAP1L
GRHL1
FLYWCH1
CBX7
STRA6
SAP30
PRKCA
UBE2E2
SFXN1
FASN
PPP5D1
CALM3
SPTAN1
KDM7A
TM2D2
ADAM9
CHD7
PLEKHF2
MINDY2
FBXL3
C17orf58
CHIC2
CACNA2D2
PHF21A
ACTN4
MRPL45
ZNF668
PATZ1
CFAP206
DIP2A
NDUFA4
PCIF1
IKZF2
DTNB
IGF1R
USF2
CUTC
COX15
SUMF1
PHIP
PRKCE
WBP1L
ATXN7L3
ADCY9
UBXN2A
LASP1
MSS51
FCHSD2
CABIN1
NFASC
IRF2BP2
EFNA3
C1QTNF1
ATP6V0D1
LYPLA1
OAZ1
KDM1A
PEAK1
HMG20A
SLC25A11
RNF167
UPF1
PTPRG
ZBTB14
BSG
CTBP1
SCYL3
LCOR
ZNF217
MELK
LYPLAL1
GAB2
CCDC88A
CBX6
PTBP3
MLLT10
MAZ
MRFAP1
CLN3
USP28
EIF4H
IFT140
CRAMP1
PKNOX1
PTP4A3
AUTS2
LIFR
GNB1
SPRTN
EXOC8
PVALEF
AATK
MAST2
SLC35A5
ATG3
STAT5B
RYK
TBL1X
PARD6B
TRMO
SMURF1
ARPC2
ATOH7
FEZ1
TMEM266
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
GFER
PRMT3
C3orf70
AMMECR1
SNX19
ARRDC3
MDM2
BTBD3
AVEN
NEK6
GBA
SLC6A6
TCTA
RHOA
UBAP2L
C1orf43
EXOC6
SNX12
THAP1
SIAH1
RBKS
C20orf141
BABAM2
NAGPA
TSPAN7
PAPSS1
THAP12
GVQW3
SRSF6
ZC3H7A
PPP2R3B
FZR1
ZNF787
UBE2E3
HP1BP3
RMND1
PTPRF
ARMT1
YEATS2
UBXN4
NSD2
DENND2B
ACACA
APBB1
MAPK8IP1
NCOA5
SGPL1
WWP1
RRAGC
AMOTL1
PXN
CPEB2
MYOG
FHL2
TAOK1
PSMA1
ABCA5
LARP1
LGALSL
RBM14-RBM4
RBM14
SINHCAF
MCOLN1
SRCIN1
PPARGC1A
SULF1
ROCK2
AFAP1
DOK7
GPAT4
FZD3
PWP2
LOC102724159
GPSM1
GNA13
LRRC20
BAX
PPM1A
MRFAP1L1
AMDHD2
UBTF
HAGH
FAHD1
ZNF507
KLF16
MPP6
HSP90AA1
C15orf61
TP53BP2
PTK2
MCM9
MTHFR
CLCN6
UBE2Q1
SPEN
VPS33A
DENND1A
C12orf66
C10orf95
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
RNF152
OSTF1
NMRK1
HIF1A
SPCS3
PDIK1L
THUMPD2
MAP3K2
THOP1
SSBP4
DLGAP4
RUFY1
VOPP1
GNB4
SEMA3D
ASPH
MAP4K3
TADA2A
RXRA
CDON
DHX15
CLIP1
GRAMD4
HES1
TRMT2A
RANBP1
TMCC1
PRR7
TNNT1
LARP4B
FAM81A
ENTPD4
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
EPC1
DCK
SPNS1
LIMA1
SMARCB1
MAPT
FREM1
MAP4K1
EIF3K
HNRNPU
REST
METTL9
CDKL5
FAM168B
CAPZA2
PPP2R5A
SUZ12
CNOT8
NEO1
MADD
RAB6A
HNRNPH2
ATP2B1
ARHGEF12
LPIN2
YTHDF2
SYNPO2L
PAIP2
CHD1
LRIG3
SPAST
MYO1D
PXT1
KCTD20
COMMD3-BMI1
COMMD3
MYBPC2
HRCT1
SRSF4
SFR1
TARBP1
POLE4
CRTC1
SCAMP4
NEURL1
ADAT3
SLX4
RAD9A
PTAR1
NFRKB
PACS2
BRF1
IKBIP
APAF1
XRCC5
C9orf40
SPATS2
ARHGAP28
QRICH1
SSH1
RNF170
KIF1C
INCA1
HOOK3
B4GALT2
RRP1
PCID2
CUL4A
WDR45B
PPP6R2
GTF2I
JMJD1C
ZDHHC5
ZNF236
DGLUCY
MPP5
KDM2A
IFI44L
LCORL
ASXL2
EBAG9
ADARB1
CHEK1
OPN3
CHML
CBLN1
SMYD1
INO80C
THEM4
RARG
ANKRD26
DIPK2A
NAPEPLD
SF3B1
LHFPL1
NDUFV2
MATR3
KLHL32
KANSL3
BLOC1S1
CCN2
CDK4
GFRA1
GPATCH8
MXRA7
TMEM167B
PTPN12
EFNA4
KLHL8
IFNAR2
ETV4
SRSF11
LRRC40
DRAM2
DGKZ
CEPT1
MFSD1
LTBP1
PHC2
CREB5
ZZZ3
NKIRAS1
RNF187
STRN4
FKRP
SNORC
EPC2
HNRNPD
POLA2
CEP162
RBPJ
NR3C2
UBE2Q2
CCDC171
BTBD9
PRKAB2
MXI1
CHD1L
NEDD4
FKBP1A
CDC73
ACOT9
PTMA
SREK1
CD47
ZNF318
ZBTB12
BTBD1
ZSWIM5
ARMH3
OPRD1
BRD3
PPP1R3D
FAM217B
HNRNPA2B1
CBX3
ST8SIA1
SMARCD2
CNN3
RYR1
RNF44
MIF4GD
SSBP1
SBK2
UTP23
COX20
UGCG
DISC1
AMIGO1
STAG1
TAFA5
LIMCH1
ARSG
ABLIM1
RAB10
CHRNA7
USPL1
HMGB1
FBXL17
SSTR5
ZNF185
CIC
BTG3
SPTBN4
DYRK2
TBC1D9
TPBGL
THOC1
FOXO3
EYA1
WDR87
SIPA1L3
CNKSR2
BCL2L1
SRI
UBXN2B
TBL2
LBR
ANKRD12
GMEB2
FSCN1
LLGL1
FBXL16
CUL5
TCF4
KLHL24
FANCC
TPM1
ABHD2
FAM189A1
AKAP1
MUSTN1
USP6NL
BSN
ADM
PPP6R1
SYNGR1
PDS5A
HSF1
BOP1
TANC2
COPG2
BLCAP
ZNF652
RGS19
OPRL1
MAK16
KDSR
DENND5B
ARID1A
HOXC13
RAD23A
ITGB3BP
INTS12
HECTD2
GSTCD
EFCAB7
TP53I13
ZNF821
TMEM145
ETNPPL
AGTPBP1
NR1D2
DUSP14
DNAJC5
KDM3A
TACC1
PTPRD
UBL4A
SPATC1L
ARHGAP5
ZBTB8OS
SLC25A12
RBBP4
C2CD5
VPS11
TRIM62
TM7SF3
MAPK3
YPEL1
MCUR1
INTS10
E2F6
SOX12
MAST4
BCAT1
ZFP1
VTA1
TNNT2
NMBR
MEF2D
HSPA2
GRN
ACSL4
CLN5
DYNC2H1
ADI1
FBXO30
PAFAH2
ATP6V1C1
PLEKHA5
CCNI
S100A2
MEX3B
KLF13
TMEM39B
TMEM201
PPP1R3E
MRPS23
RNF144A
TOB1
UBE2D3
PRKAG2
HK1
GTF2B
GRK3
VEZT
FGD6
HDAC9
GFUS
ARRB2
TBC1D19
CLK1
C5orf24
KDM4C
ARL14EP
POLR2M
CSGALNACT2
COMMD4
GNL2
TBC1D1
AIG1
COP1
VHL
HPS5
GTF2H1
SLC25A22
N6AMT1
CDCA7L
SNRPB2
MYLK4
MEIS2
INSR
SRCAP
LOC730183
ETS1
NAV2
TRIM55
TMEM170B
RCAN3
MINK1
INTS13
FGFR1OP2
VDAC3
TOR1AIP1
SNX10
DUSP28
ANKMY1
RAB3IP
BMPR1A
RASGRP3
GALE
SFMBT1
MAP3K7CL
USP31
PRKACB
NCAM1
ETAA1
ZCWPW1
TIGD2
MEPCE
VGLL4
EPS8
SLC25A34
OSGEP
APEX1
SUPT7L
SLC4A1AP
RPS7
LAMC1
ANKDD1A
KDM8
WASHC5
NSMCE2
MNAT1
CITED2
BCL7B
SMAD2
PAXIP1
ATP6V1H
MAP4
LRBA
KIAA1549
CDK5
CCAR1
TUBD1
SFXN4
RPS6KB1
GCFC2
CCNF
MAPK10
SH2D7
RYBP
JMY
BRD2
ZNF32
SAYSD1
KANSL1
CHAMP1
SCN3B
AFDN
UHRF1BP1
KLHL12
KCNF1
EVL
TRPM7
MSL2
B3GALT5
STYXL2
MTSS1
GSKIP
ATG2B
AMPD3
ADRA1A
RALB
KBTBD2
ANKRD1
CDC34
PIP4P1
CAPRIN1
PBRM1
GNL3
BARX2
PUM1
MTCL1
SDHAF3
CCNG2
MYL5
ATP5ME
PIK3CB
FOSB
SUGP2
PTK6
CHMP7
ARMC6
MRPL53
MRPL44
PPM1E
RASA1
VAPA
RNFT1
INTS7
DTL
BAG3
PROSER1
NHLRC3
AGO2
UCHL5
RO60
MTF2
KAT6A
DYRK1B
AGO4
TYW3
POU2F1
MYO6
GRIP1
CRYZ
TRIB1
RPS6KA5
OR51T1
CD99L2
MARCHF8
CRY1
CAMKK2
STS
PUDP
LRFN3
NR4A1
FSTL4
NUF2
RPUSD4
FAM118B
COPS4
CHD3