ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111320 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◣ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
SLC6A2
NRL
DCAF11
TNFAIP2
GPR84
GALNT16
FOXJ2
ZNF48
TBC1D10B
MYLPF
HOXC6
HOXC5
TCIRG1
NDUFS8
SCML4
MAP3K7CL
CCT8
PPP5C
TLE6
DNAL4
RPS5
TIAM2
IGLON5
DUX4
ING3
TRAF3IP2
DRGX
MAMDC2
KIAA0319
SF3B6
FAM228B
ENPP7
TLE5
FGF8
DPP6
CXCL12
NRSN1
GNL2
PIH1D1
ALDH16A1
HOXC4
UBXN10
PLA2G2C
GLDN
OLFML2B
KATNB1
RPL24
NR3C1
SEMA5B
GFRA3
GPR68
TMEM183B
PFN2
TOMM40L
APOA2
TRIO
DIABLO
FBXW2
P2RX1
CCN5
TGFBI
CBX5
PRR13
ZSCAN31
SLC17A8
C6
ABCA12
USH2A
KCNAB2
WIZ
MTRNR2L2
MSH3
DHFR
SRGAP2C
SRGAP2B
WDR74
STX5
C10orf105
TBX15
GSX2
ITGB5
FKBP1A
TLE3
RMDN3
GCHFR
LPIN1
RIMBP2
C1orf100
NPR1
ILF2
SYBU
TIGD4
ARFIP1
SIPA1L2
BFSP2
RAPGEF2
CHD1
SMYD3
SLC7A14
ZNF654
CGGBP1
LRRTM4
IGFBP5
TBX3
CNTNAP4
SLITRK5
STRN3
AP4S1
LRRC15
C9orf62
KBTBD11
ETV1
CYTH3
FAN1
NCK1
CMTM4
EVI5L
LENG9
CDC42EP5
ZBTB18
GPR83
ATG9B
ABCB8
DDX43
CCDC73
VAV3
SLC17A3
KL
USP7
TSHZ2
KCNK16
TAS2R20
CPO
LIMS1
NPTXR
HOXC8
AQP6
PNMA1
C1orf185
CCDC33
MTRNR2L8
CHCHD3
SLC12A3
ZBTB45
SLC27A5
GGT1
ZNF488
SCOC
SLC31A1
FKBP15
RNF183
ADCYAP1R1
EPRS1
ZBTB39
TAC3
TCF4
SLC25A25
GRWD1
MAP1LC3C
SLC2A8
TPM1
ANGPTL7
PRKAG2
ELOA2
MFSD6
RXFP4
KHDC4
ROBO4
C9orf92
RDX
HAPLN1
MGAT4C
TUBB1
ATP5F1E
SAMD11
MICAL3
C14orf180
ADGRD1
KDM4B
MRPS14
TBX2
BEAN1
CDH10
POMC
OPRM1
FOXN4
GGT2
PLEKHS1
GDF11
IFT57
UGT1A6
MECOM
PARVA
CHI3L1
CITED2
NRP2
PWWP2A
C3orf52
STON2
PDZRN3
RPS7
ELMOD2
FAM163B
GABRA1
RGS5
PIAS4
SLC25A26
AGR2
CHGA
ATF3
OXCT1
MAD1L1
SULT1C4
TMEM60
PHTF2
SUGP2
ARMC6
MACROD2
ASCC2
VSTM2A
RET
NTNG1
DNAJB8
PPP3CA
KCNH6
INTS4
PLA2R1
KIF26B
ZZZ3
LOXL1
TAOK3
VSTM5
EEF1AKNMT
CYB561
MPHOSPH8
PHKB
ITFG1
ARL17B
ELAVL4
MRPL28
SMC2
RSAD2
ASB8
RNF145
CDH18
CATSPER3
KRT80
ZNF761
CHD9
PHF14
UBE2D1
CRYBG1
IQSEC1
SOX4
RHBDD1
TUBG1
RETREG3
ID4
PRKD3
NFASC
HERC3
GJA5
H3C15
H3C14
H2AC19
H2AC18
COX16
QSER1
SKP2
LMBRD2
TRIL
CNTN1
AMY2A
TNFRSF19
TBCC
BICRAL
MTRNR2L9
PLAC1
LOC102724770
DGCR6
CYRIB
PSMC1
GPR1
CDON
SEMA4B
TUB
TIMM44
ZNF552
TFPT
PRPF31
TULP3
RHNO1
FOXM1
CTDSP1
ITPK1
MFSD12
RP1L1
CEP152
NEMP1
NAB2
HTR4
RCAN1
CENPF
CALM2
CASQ1
CD200R1L
SNX4
MAP1LC3B
FBXO31
EXOSC2
PKLR
FDPS
PTAR1
ZNF555
GNAQ
BMERB1
MEX3B
PRR25
GNG13
RBM25
BAHCC1
ZFPM2
ARPC1B
CGAS
SUPT7L
SLC4A1AP
ZBTB7C
FAIM
NRG1
PACS2
BRF1
DERL1
ABAT
PLEKHA5
KCNH2
KMT2A
TEDC2
TBC1D24
NTN3
SH3GLB2
CCNG1
ISL1
HES6
MAD2L2
DRAXIN
SIX1
HOXA7
HOXA6
HOXA5
HOXA3
RBKS
BABAM2
SNX7
LINGO1
PPM1A
AMPD2
CTBP2
PHLDB1
PRSS56
PCOLCE2
ASF1B
TMEM79
SMG5
PHOX2B
RNF4
PIK3R4
H3-3B
GALK1
LRRTM3
FRG2C
SIRT4
TMOD1
RUFY3
KCNJ3
ZNF667
SRP14
NCS1
CHRM3
PIGM
SLC18A1
FBXW7
SARS1
ATP5MC3
PBX3
FABP12
RHO
ARL14EPL
LIMA1
SGIP1
KCNK15
YWHAB
ZNF285
SLC48A1
RAPGEF3
OLFM3
DGKB
GOLGB1
EAPP
SMARCAD1
ZNF510
ASNSD1
ASDURF
STAT1
CHST6
TMEM262
NSD2
RAB39A
ACTN1
FOCAD
NT5C2
FBXO30
USP40
KNL1
PAFAH1B2
RAB28
CLASP2
COX7A2L
ANKH
MTA1
TOM1
TOX
TNS3
MTRNR2L1
PLD1
STK32B
UHMK1
SRGAP2
PDCL
RNF24
MOV10L1
MLC1
B3GLCT
TBC1D4
PODN
TFB2M
CNST
ITSN1
CRYZL1
FRMD3
MAP3K3
TRMT5
SLC38A6
CTRL
CACNA2D4
ADGRE5
FILIP1
MAPK13
PKDCC
STARD13
SCIN
KREMEN1
GYS2
MN1
SUCNR1
MTIF3
ALG10B
COMTD1
CDCA3
BARD1
SCHIP1
RTP5
PDCD1
RABGAP1L
RBM12
CPNE1
ZNF775
NGDN
DIPK1A
CDIPT
PRKG1
SORL1
SFPQ
CYP51A1
WNT5A
RARB
DRD2
RIC8B
BCL9L
DHRS2
GJD2
DIXDC1
SLC8A1
TNS1
DPP9
ZBTB38
PRKAR2B
RARA
COG3
CIB4
TPCN1
MRPL23
ITM2C
KIF2A
GCSAM
CPA3
MTA3
KCNG3
KLHDC8A
PMVK
TRAF3IP3
LSM5
AVL9
ANKHD1-EIF4EBP3
ANKHD1
UBL4B
PXYLP1
ZNF444
ARL15
TMEM245
IL19
MDM4
SMAD9
SPINK5
C8orf48
SLC31A2
ARID5A
ESRRB
TRUB2
COQ4
INAFM2
CWF19L2
ULBP3
SGSM1
DAOA
LYN
HAND1
FOXJ3
MAIP1
PAXBP1
DYNLL1
DPH2
B4GALT2
ATP6V0B
STK40
ERCC6L2
AMOT
PRRT4
INPP4B
SMARCD2
SIRT1
HOXD8
MAP2
ACVR1
APMAP
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
TIGD6
HMGXB3
BCAR3
TCERG1
C3orf38
EFCAB6
ADAMTS17
SELENBP1
LRRC18
NUF2
TDRD9
ATP5MPL
PAQR5
VPS26B
NCAPD3
CUBN
TFAP2A
BCAS2
DLX6
AMMECR1L
USP25
AP3M2
RAB11B
ZFHX2
SLC22A8
GGCT
SURF4
PGM2
LOC283710
PCDH15
GRK3
FAM222A
ADAMTS19
AP3S1
ISLR2
IRF2BPL
THUMPD1
ZFR
SEC22B
NOMO3
ABCC6
SLC41A2
HEXIM2
NOMO1
TIAM1
TAS2R1
PLXNA1
OAZ2
PRRC2B
AGTR1
TMEM141
SH3BP2
HEBP2
HOXD4
TMEM126B
DLG2
ZNF132
KIAA1549
RPP25
TBC1D31
STUM
FAM219A
DNAI1
SLC17A2
MAP3K13
SLC25A41
KHSRP
ICA1
CFAP20
VPS52
RPS18
B3GALT4
RARRES1
AGFG1
CDK17
TTC12
WDR89
RPL6
PTPN11
AFF3
NFYC
DACT2
TPGS1
CLDN4
CSDE1
IFI27L2
DISP1
IGDCC3
ASXL2
FUT6
SFR1
COL5A2
ADAMTS9
KIF26A
AOPEP
NEPRO
UTS2R
TEX19
NUDT17
PRLHR
GOLGA6D
PLEKHG5
RASD2
GBA
DACH1
RSPRY1
PSME3IP1
TMBIM6
GNA12
UBC
GPR85
BEND4
EFCAB2
SYNPO
AHCYL1
EMP3
PLCXD3
PCARE
SLC4A2
CDK5
ASIC3
BAZ1A
FGGY
PGP
E4F1
NOMO2
NTN4
PSMB2
TRPM3
DBH
GSKIP
RGMB
MRPS15
KIF3B
CUL2
SYNE3
GPR137B
KRT19
MFAP3L
KIF18B
TMEM236
SMIM3
CEP85L
SSRP1
P2RX3
SLC44A3
CLDN11
ZNF106
SNAP23
RMDN2
NME7
BLZF1
SLC36A4
HECW2
NECAP1
BLOC1S6
LIF
ZNF416
ZIK1
ZNHIT3
CAMK4
PABPN1
CUX2
LRCH1
LUC7L2
FMC1-LUC7L2
FMC1
MORC3
CELF4
CREBL2
FCF1
BMPR1B
AREL1
ANTXR2
ZBTB20
DAB2IP
ABL1
TYW1B
MTUS1
PIK3C2G
FAM107B
SORT1
ZMYND8
SLC26A7
EEF2K
RFT1
GOLIM4
FZD6
TM2D3
RPUSD3
FOXP1
NUMB
ZBTB40
C12orf43
HSPB1
HAGH
FAHD1
HDAC9
SLC16A14
ZFAND6
TENT5A
ZBTB2
DHX16
CREB3L2
BAMBI
SPATA24
RAB31
FREM1
TBC1D2
SH2B2
FGF14
B3GNT3
METTL7A
FAM102B
PPFIBP1
ZNF705A
CCDC9B
HNRNPL
ZSWIM8
CHCHD1
IGF2BP3
ZSWIM4
SYT15
LOC102724488
PDLIM4
FKBP9
SECISBP2
CKS2
DCP1B
RACGAP1
CAND1
POGZ
HPS3
SRPK2
COPS7A
STRA6
RPRD2
EYS
SPART
RGS4
MIR1-1HG
SH2D3C
GPR155
MTMR10
VLDLR
VEPH1
RASGRP1
TUBB2B
ASB6
MRPS33
KRT13
PPP6R1
TMEM167B
RBM15
TAPT1
FAM214A
HEY1
SMUG1
PDE4D
CCDC89
NRXN2
TOM1L1
MAFA
RPTOR
CARS1
PTGES2
PRPF4
CDC26
IGFBP3
MAP2K4
TNNT2
MRPL44
TRMT1
NACC1
MEIG1
DCLRE1C
DCLK3
ZC3H3
ANO6
TOMM40
MTMR2
MYL10
RNF14
PCDH12
RALGDS
NME8
CMTM2
WNK1
GRIK2
ZNF394
ZNF302
ZKSCAN5
TYW1
TSPAN3
SBDS
FBXO38
ASPG
MPP4
RAB14
GSN
NEDD4L
CYTH1
ICE1
DDX49
COPE
ZNF629
LETM1
GNB1
ADAMTS5
SLAMF8
ATP2B4
THRAP3
BAX
HPS6
ARMH3
CERKL
HES1
MATR3
RALGAPA1
PLAAT1
CLMN
CYP19A1
ZNF317
G3BP1
P2RY6
RUVBL2
NOM1
GYS1
DDX39A
C5orf49
PSMD6
NEK2
SKA2
PRR11
BAZ2A
ATP5F1B
NEURL1
ARID1A
PSMD3
RPH3A
PSENEN
PROSER3
LIN37
IGFLR1
HSPB6
APH1B
FAR2
RNF34
PRKAB2
CHD1L
RPL27
IFI35
PTPRE
H2BU1
H2AW
TMEM101
TCTN3
NBPF15
RAX2
MRPL54
APBA3
CYP8B1
PC
MARCKS
KAT6B
TMEM178A
H2BC11
H2AC11
TGFB2
FIS1
CLDN15
H4C3
H1-6
ABLIM2
CFAP126
TM2D1
PATJ
FAM98A
EML4
SPTAN1
MTX2
SEMA3C
GNRH1
PMPCB
ZNF608
RXFP2
CHST12
SNX16
TANGO2
ARVCF
SLC35B4
GP5
PTPDC1
INTS5
GANAB
TBL1X
CYP20A1
CLVS1
PPP2R5B
PEX3
GPR34
ATG2A
ADAT2
KIF3C
MBOAT4
DCTN6
TMCO5A
ST6GAL1
ZCCHC8
HSD11B1
CIZ1
PPP2R5E
CELF1
BIVM-ERCC5
MYT1
NR0B2
GPATCH3
PLEKHM3
CRTAP
TTYH3
PLXDC2
NUDT13
CLPB
ATXN7L3B
C16orf46
WWOX
SUGT1
BTG2
MYT1L
MIDEAS
ZNF263
SPAST
OPA1
NETO2
HSP90AA1
C10orf88
KRBA1
TRIOBP
CFAP69
ZFYVE26
RAD51B
FUT8
THEMIS
TSNAXIP1
RANBP10
TMEM106B
SMC4
OGDH
NBEA
MAB21L1