ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111321 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◢ SRX111320: BE(2)-C

◣ SRX111321: BE(2)-C

◢ HOXC9: STRING

NRL
DCAF11
DEPP1
FOXJ2
TNFAIP2
GPR84
GALNT16
MAMDC2
SLC6A2
MAP3K7CL
CCT8
ZNF48
TBC1D10B
MYLPF
HOXC6
HOXC5
TCIRG1
NDUFS8
TRAF3IP2
SCML4
GLDN
ING3
DUX4
UBXN10
PLA2G2C
DNAL4
TLE6
DPP6
RPL24
FBXW2
NRSN1
ZSCAN31
STRN3
AP4S1
FGF8
KIAA0319
RNF183
SLC17A3
SEMA5B
GPR68
LPIN1
PRR13
DRGX
HOXC4
C9orf92
NR3C1
TOMM40L
APOA2
SLC25A25
DDX43
WIZ
KATNB1
PIH1D1
ALDH16A1
TGFBI
KIF26B
KCNAB2
SLC17A8
SF3B6
FAM228B
OLFML2B
FKBP1A
HES6
CMTM4
SMYD3
DIABLO
RIMBP2
PPP5C
ZNF654
CGGBP1
LRRTM4
SAMD11
IGLON5
ITGB5
ZNF761
C1orf185
ZBTB18
C10orf105
RPS5
CPO
GFRA3
SYBU
CCDC73
TPM1
CITED2
C6
CXCL12
CNTNAP4
MFSD6
RMDN3
GCHFR
WDR74
STX5
MTRNR2L2
MSH3
DHFR
CENPF
GABRA1
SRGAP2C
SRGAP2B
PHLDB1
GRWD1
NCK1
RPS7
CCN5
IL19
SCOC
TIAM2
RAPGEF2
LIMS1
GDF11
ABCA12
BFSP2
USH2A
LOC102724770
DGCR6
C14orf180
TLE5
C1orf100
TLE3
SLC31A1
FKBP15
CBX5
SULT1C4
TBX15
KIF3C
LENG9
CDC42EP5
IGFBP5
SMC2
RDX
PHF14
PRSS56
TMEM183B
PFN2
UBE2D1
GNL2
COMTD1
TCF4
ELAVL4
VAV3
C9orf62
CHD1
KCNK16
MACROD2
FAN1
SLC12A3
ZBTB45
SLC27A5
SLC25A26
HOXC8
MTRNR2L8
STAT1
CHGA
SLITRK5
IFT57
ASCC2
PRKD3
SIRT1
ATG9B
ABCB8
SIPA1L2
PARVA
CHCHD3
PRKAR2B
SNX4
CRYBG1
MAP1LC3C
EXOSC2
PNMA1
OPRM1
P2RX1
AMY2A
CDH10
MECOM
HERC3
GPR1
NTN4
TNFRSF19
DISP1
ANGPTL7
COX16
ZZZ3
OLFM3
RTN4IP1
GGT2
KBTBD11
DCLK3
ETV1
PLEKHS1
FBXO30
PIAS4
AQP6
RSAD2
TAS2R20
ADGRD1
LRRC15
RCAN1
MAD2L2
DRAXIN
GGT1
PDCL
MICAL3
KMT2A
GYS2
GJD2
TSHZ2
ITPK1
FAIM
RXFP4
KHDC4
TRMT5
SLC38A6
IGDCC3
SLC2A8
FOXN4
HAPLN1
TUBB1
ATP5F1E
PHOX2B
EVI5L
NTNG1
SKP2
LMBRD2
TEDC2
TBC1D24
NTN3
RBKS
BABAM2
UGT1A6
NEPRO
MTUS1
ZBTB39
TAC3
DNAJB8
DAOA
CYTH3
ADCYAP1R1
GJA5
GSX2
SLC11A1
CHI3L1
STON2
ATF3
ZNF488
LRRTM3
TRIO
FAM163B
IQSEC1
TRIL
EEF1AKNMT
PPM1A
PIK3C2G
RGS5
TFPT
PRPF31
CHRM3
NFASC
DERL1
MTRNR2L1
SYNE3
ABAT
SMAD9
VPS52
RPS18
B3GALT4
SWSAP1
EPOR
SPINK5
KL
PLEKHA5
RPH3A
ROBO4
SLAMF8
ACTR3
KIF26A
NRP2
LIMA1
GGCT
KDM4B
NRG1
PLXNA1
VSTM2A
B3GLCT
SIX1
CDCA3
DYNLL1
SNX7
CPA1
TBX3
NPTXR
PWWP2A
GNAQ
CHST6
RARB
PLD1
PRKG1
DRD2
CFAP126
SGIP1
DIPK1A
CCDC33
CD200R1L
BARD1
PPP3CA
H3C15
H3C14
H2AC19
H2AC18
DLX6
ZFAND6
WNK1
HGF
COX7A2L
RARRES1
TIMM44
DIXDC1
RAB11B
ATP2B4
NSD2
RGS4
GPR85
BAZ1A
AOPEP
MPP4
OXCT1
CATSPER3
CNTN1
AFF3
IGF2BP3
SCARB2
FAM47E
C3orf52
MAD1L1
CYRIB
FRG2C
CDH18
CARS1
PPP2R5E
MFSD8
ABHD18
FRG2
USP7
LOXL1
ZNF350
MFSD12
DGKB
SIRT4
SLC31A2
SLC7A14
ZNF510
USP40
SH3GLB2
BAMBI
SOX4
RIC8B
CABCOCO1
FGF1
MTHFSD
ANKH
CDON
FAM219A
DNAI1
TMOD1
UPP1
SLC17A2
GPR107
LYN
UTS2R
TEX19
MAP3K13
PRKAG2
ZNF552
RAB39A
MAPK13
SLC25A41
KHSRP
BEND4
SEMA4B
PACS2
BRF1
CCNG1
MTA1
OAZ2
ICA1
PLA2R1
MIR1-1HG
TM2D1
PATJ
HEBP2
TECTA
AGR2
PAFAH1B2
PKDCC
COL21A1
SPATA24
ZNF555
MN1
ACVR1
TOM1
AGFG1
GPR137B
SRP14
GOLGB1
EFCAB2
ZNF106
SNAP23
CHD9
ITM2C
ISL1
CYP8B1
YWHAZ
RAG1
TIGD4
ARFIP1
PMVK
DCP1B
PDZRN3
KCNH6
SLC8A1
PSMB2
RMDN2
SH2D3C
FAM160A1
SMARCAD1
CRYGB
GPR83
MRPS14
PDE3A
SLC35B4
HAND1
HOXD4
CHP1
ABT1
PTBP2
TUB
FAM222A
ELMOD2
ARL14EPL
ASNSD1
ASDURF
FAM107B
GRIK2
RNF4
ZFHX2
ENPP7
QSER1
RAB28
EFCAB6
PSMC1
ITSN1
CRYZL1
APMAP
HEXIM2
MUC3A
KCNH2
PBX3
BMERB1
STARD13
SCHIP1
CAPN10
RNF24
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
CDK17
MTNR1B
MAP1LC3B
FBXO31
ZBTB7C
RASSF8
AGL
NPR1
ILF2
ZNF608
SLC39A13
KCNAB1
NEMP1
NAB2
STK32B
ANKHD1-EIF4EBP3
ANKHD1
RBM15
PTGES2
EIF3D
EPRS1
PCOLCE2
ZNF775
RAB14
GSN
LSMEM1
XAB2
STXBP2
PCP2
PTPRK
AMMECR1L
CYB561
AMPD2
RASD2
VEPH1
PKLR
FDPS
BCL9L
TMEM126B
DLG2
PSENEN
PROSER3
LIN37
IGFLR1
HSPB6
MBOAT4
DCTN6
TJP2
HTR4
TCERG1
ADAMTS17
APH1B
GP5
UBE2V1
ZFPM2
OSBPL1A
CREB5
PRRC2B
DEGS2
TBRG4
TMEM60
PHTF2
CFAP20
TAPT1
BLOC1S5
SESN1
CEP57L1
RHO
RACGAP1
FAM214A
PRPF4
CDC26
WASHC3
SUGP2
ARMC6
SLC48A1
RAPGEF3
SUCNR1
MRPL28
KNL1
MTIF3
DHRS2
BZW2
RHBDD1
TBCC
BICRAL
KCNK15
MRPL27
EME1
CLMN
PC
TAOK3
HOXA7
HOXA6
HOXA5
HOXA3
EAPP
ZNF132
KIF2A
CTRL
RTP5
PDCD1
GPR155
FLRT3
ADAMTS19
TPGS1
TRPM3
PSMD6
FLYWCH2
DMXL2
C14orf93
PHKB
ITFG1
CEP152
NOMO1
DBH
IGFBP3
MARCKS
ZNF667
ARID5A
SHC1
FLAD1
CKS1B
PRUNE2
TBX2
RAB31
IMPDH1
RERE
TBC1D4
RARA
FAR2
GRAP2
CTBP2
ACTN1
DPH2
B4GALT2
ATP6V0B
MC4R
REX1BD
MAP7D2
LIPG
SLC18A1
FREM1
CPN2
TCP1
PNLDC1
MRPL18
VPS26B
NCAPD3
ZC3H3
CDH15
MCCC1
RNF34
ASF1B
AP1M1
PTPDC1
SPSB3
NUBP2
MRPS34
EME2
IAH1
MEST
ARHGEF3
CDIPT
HOXD8
FAM98A
AKAP11
STK39
PPP1R3C
CHODL
SORL1
MDM4
MAP2
SELENBP1
KRBA1
EHD4
ARID5B
FAM240C
STAMBP
GBA
WBP11
SMCO3
C12orf60
GDF5
CEP250
OSBP2
VSTM5
CACNA2D4
C8orf48
TBC1D2
PRKAB2
CHD1L
GNG12
SNX6
C3orf38
TTC12
ZSWIM4
TLN2
ZNHIT3
MRTFA
ZNF408
NOSTRIN
ARHGAP1
PRR25
GNG13
SFPQ
CAND1
THRAP3
TRIM56
TLX3
NUP93
ETS2
TAGLN2
NCS1
STK40
SYNPO
ABTB2
MARVELD2
KIAA1549
ASXL2
CAMK4
BAX
LMO7
SVBP
ERMAP
KIAA0895
ANLN
NME7
BLZF1
SORT1
ARL4D
ZNF566
B3GALT2
SDR39U1
PHF19
TTC22
HOXA4
ADGRE5
TIAM1
CREBL2
FOXP1
RASGRP1
IGFBP7
RFTN1
GGT7
ACSS2
LMO4
BANK1
ARL17B
FCF1
BMPR1B
AREL1
SLX4IP
MKKS
ITGA11
TULP3
RHNO1
FOXM1
KRT19
NUMB
RXFP2
RHOBTB1
SEPTIN11
OXR1
TIGD6
HMGXB3
MFAP3L
KIF18B
NEK2
ZNF749
PTBP1
GPRC5A
WRN
PURG
PTAR1
ESRRB
NEDD4L
HERPUD1
ZNF417
GSE1
INTS4
NGDN
AP3S1
MTMR10
TUBB2B
RIMS2
RUFY3
RPP25
NFYC
ANO6
PTPRR
TRERF1
NCOA2
FBXW7
RABGAP1L
CUBN
AHCYL1
POGZ
GCSAM
DYNLT1
MBNL3
DOK3
DDX41
BEAN1
FGGY
NDUFB5
MRPL47
MIA3
TUBA1C
BICD1
RPS26
GXYLT2
WBP4
ELF1
ULBP3
LRRC18
USP25
FUT6
STYX
METTL25
CCDC59
LARP1
TNRC18
LOC100129484
CCDC38
AMDHD1
YWHAB
MMS22L
GOLGA5
RP1L1
UHMK1
NUF2
ANTXR2
SLIRP
ALKBH1
TXNRD1
PIK3R4
HPS3
WAC
GLIS3
MLLT3
TMEM100
NEMF
ABCC5
CCDC130
ARHGAP32
TBL1XR1
MPHOSPH8
EMP3
CERKL
PPP1R11
POLR1H
RBM25
H3-3B
GALK1
FRMD3
PABPN1
HES1
CELF1
LCN9
MEAK7
ASF1A
PDE4D
CCDC89
SKA2
PRR11
H3Y2
CARD16
SCIN
ZBTB40
GABRR1
FOXN3
OXER1
GRAMD1B
GAST
ZNF430
MEX3B
SYT15
LOC102724488
SRPK2
KAT6B
TRIOBP
UBA5
ACAD11
ALG10
WNT2B
YLPM1
HEBP1
DGKD
TMEM141
BIVM-ERCC5
SEL1L
TDRKH
ZSCAN32
ZNF174
CNTN4
BAHCC1
GSKIP
TMEM236
NRXN2
KIAA0232
B3GNT4
GOLT1A
DCC
PDIA6
CDH17
COA1
TMEM39B
PCMTD2
LRGUK
LPAR5
DPYSL4
BBX
PLAC1
FOXJ3
CHST12
PCSK6
SH3BGRL2
PRSS41
FRMD6
WDPCP
TMEM242
MEGF11
PODN
CFAP69
USF1
TSTD1
RPS6KA2
TDG
C12orf73
PALB2
DCTN5
TARS1
GTF2A1
EGR1
ZBTB20
HS3ST5
CEP41
SULF2
DYRK1B
DYTN
DTWD2
CNPY2
CNIH4
RET
SMIM3
CYP19A1
TENT2
FBXO34
CNOT3
RPS9
TBX20
UBE2J1
HMCN2
ELOA2
MAIP1
THUMPD2
HAPLN2
ZNF148
VPS72
TRAF7
RAB26
LGALS8
KRT80
TOX
UBL4B
SLC36A4
SH2B2
ZFYVE26
RAD51B
HNMT
TRIP10
GPR108
EVX2
ECE1
LINGO1
FOCAD
COX7C
DMAC1
ACYP2
NAPB
EHBP1
ID4
CALM2
PGP
E4F1
RPL27
IFI35
MYT1
MUSK
MRPL34
DDA1
ABHD8
CAPNS2
UBE2S
RHOQ
CDIN1
BUB3
ATP6V1E2
MOV10L1
MLC1
CPA3
AGTR1
PKD1L1
MYB
LRMDA
HIGD1C
CLASP2
PTPRE
GPR19
SRRD
HPS4
UTP25
SREK1
PRL
AKAP6
SPATC1L
RXRA
ARPC1B
ZFR
CEP85L
HECW2
PDLIM4
ASB6
TOMM40
CYTH1
TMEM178A
TMCO5A
APOLD1
TMEM94
TM7SF3
PRMT6
MED21