ChIP-Atlas: Target genes

Potential target genes for Kdm1a

Query protein: Kdm1a
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX759289 | Cortical neuron
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Kdm1a's Target genes

◢ Kdm1a: Average

◢ SRX352235: 3T3-L1

◢ SRX352237: 3T3-L1

◢ SRX352239: 3T3-L1

◢ SRX352241: 3T3-L1

◢ SRX3833337: B16

◢ SRX3833341: B16

◢ SRX3660773: Bone Marrow Cells

◢ SRX3660774: Bone Marrow Cells

◢ SRX1771149: Brown adipocytes

◢ SRX2161607: C2C12

◢ SRX2761853: C2C12

◢ SRX2761855: C2C12

◢ SRX2761857: C2C12

◢ SRX3633790: C2C12

◢ SRX3633792: C2C12

◢ SRX451712: C2C12

◢ SRX451713: C2C12

◢ SRX3660771: CD4 CD8 double negative cells

◢ SRX3660772: CD4 CD8 double negative cells

◢ SRX759288: Cortical neuron

◣ SRX759289: Cortical neuron

◢ SRX759290: Cortical neuron

◢ SRX759291: Cortical neuron

◢ DRX013314: EpiSC

◢ DRX013326: EpiSC

◢ DRX013339: ES cells

◢ SRX019360: ES cells

◢ SRX047140: ES cells

◢ SRX047141: ES cells

◢ SRX2831996: ES cells

◢ SRX7409683: ES cells

◢ SRX7409684: ES cells

◢ SRX7409686: ES cells

◢ SRX7409687: ES cells

◢ SRX181863: Granulocytes

◢ SRX5056006: Hematopoietic progenitors

◢ SRX5056007: Hematopoietic progenitors

◢ SRX2980170: Leukemia, Myeloid

◢ SRX3464952: Macrophages

◢ SRX3464953: Macrophages

◢ SRX3464954: Macrophages

◢ SRX3464955: Macrophages

◢ SRX5131515: Medulloblastoma

◢ SRX5131516: Medulloblastoma

◢ SRX665198: MEL

◢ SRX504218: mESC derived mesodermal cells

◢ SRX504219: mESC derived mesodermal cells

◢ SRX1433430: Neural Stem Cells

◢ SRX1433433: Neural Stem Cells

◢ SRX5126305: Prefrontal Cortex

◢ SRX5126306: Prefrontal Cortex

◢ SRX1655665: Pro-B cells

◢ SRX1655666: Pro-B cells

◢ SRX1655667: Pro-B cells

◢ SRX1655668: Pro-B cells

◢ SRX254632: Spermatids

◢ SRX254628: Unclassified

◢ Kdm1a: STRING

Gm20594
Pnpla6
Rps29
Plekhg2
St6galnac6
Smg9
Gtpbp3
Ddx49
Cope
Man1b1
Erlin2
Crtac1
Prrg2
Nosip
Bloc1s4
Rabl6
Srrd
Hps4
Ift52
Tax1bp3
Emc6
Rps12
Zdhhc6
Vti1a
Ctnnb1
Caap1
Rasgrp2
Rrp1
Med20
Gm20517
Bysl
Ube2o
Zfp729a
Vps37b
Scamp5
Casp8ap2
Ing3
Frg2f1
Foxj3
Zc3h18
Fam98a
Znrd1as
Znrd1
Urb2
Taf5l
Rpl9
Lias
Bod1l
Polr3e
Tinf2
Psmb6
Wdr45b
Ppid
Trpm7
Acad9
Pskh1
Noc4l
Ddx51
Agbl5
Esyt2
Nup214
Sh3bgrl2
Rps26
Sde2
Tox4
Rab2b
Prune1
Smim12
Fdxacb1
1110032A03Rik
Kbtbd3
Snip1
Dnali1
Tbl3
Nop53
Chek1
Hjurp
A730008H23Rik
Dhx8
Nol11
Syt12
Ctnnbl1
Ptpn11
2610301B20Rik
Ralgapa1
Zcwpw2
Azi2
Ndufs7
Med6
Cops8
Clp1
Rps6kb2
Ppig
Gfus
Yipf5
Arid1a
Clpb
Nolc1
Zfpl1
Cdca5
Rnf185
Arih1
Tbcb
Polr2i
Eif3j2
Eif3j1
Slc35a4
Apbb3
Eif3f
Dusp18
4921536K21Rik
Twistnb
Lrrc61
Irf3
Bcl2l12
Ctnna3
Mapkbp1
Aasdh
Apba3
Polr2e
Ipo11
Ebag9
Ahcyl2
Ing4
Nedd8
Gmpr2
Hps1
Mgst3
Hint3
Cdpf1
Zfp839
Mrpl30
Mitd1
Polg
Sf3b2
Setdb1
Mterf1a
Prcc
Ift88
Lin37
Arrdc2
Vps18
Hmgxb3
Rsu1
Ranbp2
Braf
Rpl21
Zfp58
9530077C05Rik
Acaa1a
Kifc1
Gosr1
Mcph1
Ptbp1
Fbh1
Ankrd16
Rc3h2
Tigar
Exd1
Chp1
Npas4
Syt11
Mettl25
Ccdc59
Cacng2
Pcyox1l
Sspn
Phf21a
Pick1
Map9
Hmgn1
Ttc9b
Limk2
Tpgs2
AW554918
Cep78
Tjp2
Insig1
Scoc
Tomt
Tuba1a
Lamtor1
Hlcs
Tdrkh
Kntc1
Tatdn3
Nsl1
Psmc4
Sirt6
H4c3
Gm3448
Gm3417
Zfp287
Gmfb
Rwdd1
Ccdc126
Tubgcp5
Calm3
Prkrip1
Zfp41
Ddx41
Slc25a46
Mrps18c
Helq
Eif2b3
Mterf1b
Mis18bp1
Abcc10
Ccdc88a
Psmb2
Asf1b
Pold2
Pwwp2a
Mmaa
Get1
Gm3435
Tecpr2
Cinp
Tnfaip1
Ift20
Thop1
Zup1
Zfp14
Snx11
Ctdsp1
Spring1
Rnft2
9030025P20Rik
Clcn4
Arl6ip1
Sympk
Zfp346
Foxa3
Fbxw7
Chd1l
Slc33a1
Ddx20
Zfp335
Naa35
Ints4
Trappc9
Uchl5
Ro60
Chst12
Ankrd24
Dyrk1a
H4c18
Tcte3
Ermard
Pbx4
Tmem184c
Kctd5
1110051M20Rik
Lrrc20
Htra2
Aup1
Sfi1
Pcx
H3c6
Mypop
Psmd3
Akap13
Ssbp1
Pabpn1
Pitrm1
Vps33a
Cdc5l
Tbcd
Cdc34
Bbs10
Flywch1
Nme1
Lman1
Zbtb21
Tmtc3
Cep290
Timm17a
Scamp4
Adat3
Tsga10
Snrpc
Kifc5b
M6pr
Ap1s1
Pik3c2a
Dnajc27
Cenps
Zbtb40
Ipo8
Ppp1r8
Letmd1
Rab33b
Zfp142
Bcs1l
Fra10ac1
Zc3h3
1700029J07Rik
Zfp658
S100pbp
Ift46
Ube3c
Yars
Chd8
Snd1
Cnot8
Rabl2
Scrib
Mphosph9
2810006K23Rik
Dgat1
Msh6
Zscan25
Eya3
Crem
Slc25a4
Spty2d1
Cltc
Map3k3
Taf13
Rpl3
Mfsd8
Rapgef6
Sh3gl1
Polr3f
Dzank1
Tbc1d10b
Mylpf
Dnajc10
H4c11
Wbp2
Nop14
Grk4
Tmed2
Gpatch3
Troap
Rbsn
Copb2
Rpl41
H4c4
Gtf2b
Rtf2
Snai1
Cdkn2aipnl
Brpf1
Stag1
Vamp1
Atp6v1c1
Nup54
Cherp
Arf1
Mrnip
Mtf2
Notch2
Abhd18
Mrpl45
Cdk11b
Zfp623
Tmem64
Pld3
2310022A10Rik
Timm13
Mapk14
Gtf2a1
Zdhhc12
Sgta
Mob4
Exoc5
Ap5m1
Tubgcp3
Got1
Rdm1
Ep400
Nup205
Ddx55
Trmt2a
Ranbp1
Cutc
Cox15
Hsp90aa1
Micu2
Rubcn
Zfp846
Prdx1
Tubg1
Retreg3
Pcbp2
Ddhd2
Clcn3
Tmed5
Ccdc18
Rlf
Surf6
Ddost
Akr1b3
Mettl17
Katnal1
Naa40
Supt4a
Sec22a
H4c14
Hexb
Mvk
Mmab
Pafah2
Hsph1
Cmtr2
Cdk13
Hspa8
H4c9
Gtf3c6
Med16
Cdk5rap2
Adnp
Cdc73
Ccar1
Poc5
Nuf2
Mtres1
Srebf1
Zfand2a
Wtap
Cep164
Zbed4
Utp3
Sptan1
Ufsp2
Aktip
Cd2bp2
Ccdc71
Tyw1
Usp35
Kctd21
Spdye4b
Rbak
Pdia4
Htt
Etfdh
4930579G24Rik
Adss
Gtf2e2
Nrxn2
Azin1
Zbtb6
Otud6b
Stxbp4
Cox11
Birc2
Tmem237
Atg16l2
Ssna1
Anapc2
G3bp2
Klhdc10
Vps26c
Ap1g1
Osgin2
Zfp213
Tex9
Prkcsh
Ccdc151
Fam53a
Actr3
Rps3a1
Rgl1
Arpc5
Itpa
Borcs7
Dcp1a
Arhgap30
Ints9
Hmbox1
Napa
Ppme1
C2cd3
Pigm
Ankrd40
Arhgap35
Rab8a
Nabp2
Adam10
Ndufaf5
Esf1
Tex14
Eapp
Gpcpd1
Ppib
Arf3
Scaf8
Ints10
Birc5
Angel2
Tmem209
Ssmem1
Zfp13
Cbwd1
Dhx16
Cct4
Uvssa
Slc39a13
Mpc2
Dcaf6
Ccnt1
Cnpy3
Tcta
Rhoa
Raly
Skp2
Lmbrd2
Tbc1d23
Psmd8
Cipc
Pdcd5
Gorab
Zfp622
Stk32c
Pcnx4
Pars2
Dpy19l4
Polr2a
H2bc18
Ap1m1
Phax
Aldh7a1
Mtmr6
Kxd1
D030056L22Rik
Cfap20
Gm13285
Ptcd1
Cpsf4
Map4
Tmem250-ps
Dennd6b
Tfrc
Bbs2
Ulk4
Zfp1
Slc39a3
Sarnp
Ormdl2
Irak1bp1
Ubxn2a
Rad9b
Cpsf1
Trim59
Nfat5
Mfsd5
Birc6
Inpp5k
Tmem39a
Msmo1
Nsrp1
Mad2l1bp
Slc35a1
Mthfd2
Ptpn4
Hmgb2
Gpat4
Pa2g4
Pak4
Ccdc77
Tprkb
Nat8f1
Lrrc27
Gtf3c1
D430042O09Rik
Rhot1
Pabpc1
Pkm
Gm13290
Gm13289
Cnnm3
Pum3
Map3k2
H4c17
Bsg
Ist1
Cyb5r4
Fbf1
Cep85
Polr2j
Taok2
Polr3k
Ing1
Hspa14
Cdnf
Hspa4
Mrpl39
Snx5
Mgme1
H1f2
Psmg2
Dguok
Vstm2l
Kbtbd8
Cox5b
Nfya
Sf3b5
Mbd2
Josd2
Gpn3
Fam216a
Lmbr1l
Ap1ar
Xpa
Tut7
Pisd
Srsf10
Ilrun
Asxl2
Npm1
Maco1
Zc3h15
Slc3a2
Sec61a1
Farp2
Epg5
Slc25a19
Dynlt1b
Arl6
Ankrd37
Rasa1
Dhodh
Slc30a5
Mief1
Invs
Erp44
Psph
Cct6a
Anks3
4930451G09Rik
Ppif
Trmt5
Slc38a6
Hnrnpf
Ttc21a
Gorasp1
Mapk6
Fitm2
Rer1
Morn1
Pwwp3a
Adprhl2
Spg11
Pold3
Tpk1
Pole4
Sys1
Scfd1
Eloc
Dnajc16
Wipi2
Ift122
Chmp5
Bag1
Zfp607b
Exd2
Nsfl1c
Papss1
Atg5
Asf1a
Anapc11
Alyref
Tmx1
Eef1g
Rnf149
Ilf3
Caprin2
Adam17
Sufu
Slc9a1
Prrc2a
Prkab1
Ap2s1
Hat1
Zbtb44
Egfl7
Nup85
Edrf1
Snx17
Eif2b4
Ccna2
Wdr47
Ccdc124
Hyou1
Calr
Tial1
Orc4
Mbd5
Suclg1
Zpr1
Ptcd2
Mrps27
Cops4
Abhd4
Atad2
Prkag2
Hif1an
Xkr7
Dars2
U2surp
Tsen54
Ptk2
Ufl1
Gclm
Polk
Cert1
Gadd45a
Trappc8
Sec31a
Calm1
Edem2
Chfr
Tssk6
Ndufa13
Tctex1d2
Ndufa9
Cenpf
Nelfa
Sgpl1
Ccdc107
Ubxn6
Faf1
Rbm25
Ube2w
Ndufs4
Tpgs1
Cyren
Sf3b1
Ythdf2
Ccdc9
Cfap97
H3f3b
Cdkn2aip
Tpp2
Hexim2
Eps15l1
Klhl20
Usp32
Usp42
Slc15a4
Wdr18
Maz
Thap12
Khsrp
Psma6
Tex30
Scrn3
Cir1
Mrps33
Med26
Zfp382
Oard1
Nagk
Fam171b
Tnrc6b
Mtmr14
Mrps30
Gins3
Golga7
Klhdc8b
Anapc10
Abce1
Ect2
Nanos1
Clptm1l
Mfap3
Fam114a2
Prpf38a
Orc1
Ehd1
Gga1
Kbtbd7
Diaph1
Czib
Pradc1
Cct7
Xpot
Prpf19
Idh1
Srsf1
Shprh
Mtrex
Dhx29
B230219D22Rik
Psmd5
Mysm1
Fyttd1
Ccnt2
Tfg
Pex3
Adat2
Wfs1
Ercc6l2
Pigt
Nat9
Zfyve1
Cenpu
Abcf2
Poldip3
Fdft1
Celsr3
Usp12
Ift140
Rnf216
Gm13288
Esco1
Thap7
Tmem65
Mmadhc
Thumpd3
Cap1
Urgcp
B9d1
Abhd8
Caskin2
Stk38l
Cln5
H1f4
Eif4b
Elovl5
Ifrd1
Tbc1d2
Get4
Yif1b
Dnajb1
Agk
Nubp1
Cenpw
Hace1
Fkbp1a
Dnajb12
Cnih4
Slc9a8
Nupl1
Cramp1l
Men1
Fam118a
Cdc42se2
Pstk
Them4
Rad52
H4c12
Erich1
Lss
Zscan20
Hps3
Cluh
Stat1
Ints3
Prdm4
Pcf11
E4f1
Plekha1
Fam3c
Ssbp2
Eef2kmt
Gipc1
Pgam1
Mcrs1
Ttc1
Lrp11
Kifap3
Hmgcr
Acp2
Sel1l
Cep76
Diablo
Wdr33
Vps13a
Tctn3
Entpd1
Abhd12
Cenpp
G3bp1
Serinc1
Ikbip
Gmcl1
Apaf1
Serpini1
Pdcd10
A430005L14Rik
Ttc32
Rps20
Gm2a
Pcid2
Cul4a
Tdg
Tnks
Abhd17b
1110059E24Rik
Zfp707
H3c13
Rpl15
Nkiras1
Nudt9
Slc26a6
Ppp1r12b
Pgp
Lsm6
Slc25a23
Slbp
Trerf1
Fam120b
Zfp568
Myo5a
Ndufb7
Cct8
Arf4
Nabp1
Kpna3
Rrm1
Pfas
Usp8
Snrpg
Asb1
Prc1
Slc18a1
Atp6v1b2
Arrb2
Tube1
Myo9b
Haus8
Fam229b
Tcf25
Atp9b
Camsap1
Xpo1
Mtmr10
Dnajc30
Bud23
Trip4
Sdhb
Zfp113
Creld2
Alg12
Copg1
Tob2
Snapc1
Rangap1
Mex3b
Tram1
Aspscr1
Ift57
Mmd
Rnf7
Kctd18
Frg1
Gpr19
Zfp655
Tmem161a
Cdk20
Zfp317
Cfap298
Txnl4b
Dhx38
Ints6
Krr1
Haus4
Ran
Kdm3a
Ano6
Rabif
Camsap2
Suz12
Armc9
Thoc1
Abcc5
Rheb
Rnf187
A130010J15Rik
Rap2a
H2bc4
Mbd4
Usp36
Nbn
Lrrc49
Dnajb9
LTO1
Adrm1
H3c14
Exosc6
Top3b
Gtf2f1
H4f16
Cbfa2t2
Ppp1r11
Ahctf1
Rad23b
Zranb1
Msh3
Dhfr
Atox1
Tmed3
Slc2a6
Nceh1
Wwox
Rpl27
Kras
Sfr1