ChIP-Atlas: Target genes

Potential target genes for Kdm1a

Query protein: Kdm1a
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5131515 | Medulloblastoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Kdm1a's Target genes

◢ Kdm1a: Average

◢ SRX352235: 3T3-L1

◢ SRX352237: 3T3-L1

◢ SRX352239: 3T3-L1

◢ SRX352241: 3T3-L1

◢ SRX3833337: B16

◢ SRX3833341: B16

◢ SRX3660773: Bone Marrow Cells

◢ SRX3660774: Bone Marrow Cells

◢ SRX1771149: Brown adipocytes

◢ SRX2161607: C2C12

◢ SRX2761853: C2C12

◢ SRX2761855: C2C12

◢ SRX2761857: C2C12

◢ SRX3633790: C2C12

◢ SRX3633792: C2C12

◢ SRX451712: C2C12

◢ SRX451713: C2C12

◢ SRX3660771: CD4 CD8 double negative cells

◢ SRX3660772: CD4 CD8 double negative cells

◢ SRX759288: Cortical neuron

◢ SRX759289: Cortical neuron

◢ SRX759290: Cortical neuron

◢ SRX759291: Cortical neuron

◢ DRX013314: EpiSC

◢ DRX013326: EpiSC

◢ DRX013339: ES cells

◢ SRX019360: ES cells

◢ SRX047140: ES cells

◢ SRX047141: ES cells

◢ SRX2831996: ES cells

◢ SRX7409683: ES cells

◢ SRX7409684: ES cells

◢ SRX7409686: ES cells

◢ SRX7409687: ES cells

◢ SRX181863: Granulocytes

◢ SRX5056006: Hematopoietic progenitors

◢ SRX5056007: Hematopoietic progenitors

◢ SRX2980170: Leukemia, Myeloid

◢ SRX3464952: Macrophages

◢ SRX3464953: Macrophages

◢ SRX3464954: Macrophages

◢ SRX3464955: Macrophages

◣ SRX5131515: Medulloblastoma

◢ SRX5131516: Medulloblastoma

◢ SRX665198: MEL

◢ SRX504218: mESC derived mesodermal cells

◢ SRX504219: mESC derived mesodermal cells

◢ SRX1433430: Neural Stem Cells

◢ SRX1433433: Neural Stem Cells

◢ SRX5126305: Prefrontal Cortex

◢ SRX5126306: Prefrontal Cortex

◢ SRX1655665: Pro-B cells

◢ SRX1655666: Pro-B cells

◢ SRX1655667: Pro-B cells

◢ SRX1655668: Pro-B cells

◢ SRX254632: Spermatids

◢ SRX254628: Unclassified

◢ Kdm1a: STRING

Map9
Syt11
Cacng2
Ube2o
Zbtb21
Map3k3
Ulk4
Thop1
Pik3c2a
Fbxw7
Tex9
Kifap3
Bbs10
Ddx41
Ing3
Rab39b
Vstm2l
Tecpr2
Cinp
Irak1bp1
Jam3
Tubgcp3
Psmb2
Pold2
Dnajc27
Iqsec3
Cdc42bpb
Tatdn3
Nsl1
Fam222b
Tpgs1
Zc3h3
Nup85
Lca5
Tbc1d32
Mrnip
Lins1
Rad51b
Zfyve26
Gorab
Mettl25
Ccdc59
Prkcsh
Ccdc151
Tctn3
Entpd1
Sec22c
Homer1
Lrp11
Invs
Erp44
Pnisr
Serpini1
Pdcd10
Xkr7
Nap1l1
Ccdc28a
Eya3
Spring1
Rnft2
Rc3h2
Rtf2
Zfp386
Rwdd1
Nrxn2
Slc25a46
Cdk20
Gpatch3
Ints4
Npas4
Get1
Fnip2
Ift74
Arfip1
Odf2l
Poc5
Mmadhc
Focad
Pdp1
Mphosph9
2810006K23Rik
Kbtbd8
Fzr1
Zfp866
Copb2
Hjurp
A730008H23Rik
Mypop
Xpa
Tmx1
Fdft1
Tmtc3
Cep290
Mtmr6
Ift122
Mbd4
Limk2
Zfp346
Lyplal1
Eif4a3
Bms1
Trmo
Pcyox1l
Akain1
Mis12
Derl2
Etfdh
4930579G24Rik
Pcnx4
Hps3
Cfap300
Chgb
Fntb
Actr6
Otud6b
Ubxn7
Mfsd1
Dnajc10
B3gntl1
Mrpl48
Rfc1
Stxbp3
Snx11
B9d1
Dock6
Scoc
Ssbp1
Prrc2a
Tmx2
Med19
Zfp963
Ddx49
Cope
Cd164
Coq7
Tpp2
Casp8ap2
Tinf2
Por
Pole4
Ccdc34
Bbs2
Polr3b
Borcs7
Abcc5
Trpm3
Lca5l
Hnrnpl
Me2
Dync2li1
Copz1
Ints9
Hmbox1
Map3k14
Tsga10
Nup54
Vps26c
Pgam1
Stx12
Zfp78
Pick1
Birc2
Tssk6
Ndufa13
Rab4b
H13
Abhd17b
1110059E24Rik
Yif1a
Zpbp2
Pcgf1
Pcf11
Dym
Asf1b
Map4
Zfp959
Acat2
9430038I01Rik
Prim1
Mettl17
Tbc1d23
Psmc4
Ift57
Trmt5
Slc38a6
Alg14
Ccdc130
Adk
Ap3m1
Cpt1c
Polr3f
Dzank1
Kif5c
Cwf19l2
Ddx59
Banp
Lnpk
Wdr19
Mindy4
Cd320
Abcc10
Mapkapk5
Btbd2
Zfp14
Tmed5
Ccdc18
Ptrhd1
Cenpo
Med11
Cdc5l
Rer1
Morn1
Lmbrd1
Umad1
Rpa3
Rttn
Wac
Zfp444
Lrrc49
Mccc1
Slc27a1
Mast3
Psmg4
Cep55
Angel2
Xpo1
Dcun1d5
Dync2h1
Ube3c
Mvb12a
Phc3
Prkrip1
Arf3
Psph
Cct6a
Exoc3
Lancl2
Zfp142
Bcs1l
Cnnm2
Commd10
Cdk11b
Zfp712
Ska2
Prr11
Fxr2
Smim13
Nphp3
Hspbap1
Slc49a4
Tmem135
Zfp882
Cttnbp2nl
Acadl
Ralgapa1
Arl6
Cyp51
Elp6
Ascc1
Anapc16
Vgf
Tsen2
H4c3
Aph1c
Stk32c
Lrrc27
Hsph1
Ptpn4
Tnks
Aptx
Elapor1
1700013F07Rik
Wwox
Disp2
Smyd4
Rpa1
Wdr35
Polr3k
Twistnb
Snx5
Mgme1
Nabp1
9130401M01Rik
Pole3
4933430I17Rik
Otub1
Abcf3
Setmar
Ndufs4
Ttll5
Erg28
Pgbd5
Ttc9b
Tnfaip1
Ift20
Napepld
Zfp446
Trim67
Atp6v1c1
Map6
Ddias
Prcp
Mvk
Mmab
Eapp
Dlat
Zdhhc7
Skp2
Lmbrd2
Trub2
Rpe
Nasp
Mettl4
Cmtr2
Slc25a19
Sppl2a
Ift88
Tctex1d2
Trp53bp2
Zdhhc6
Vti1a
Stxbp4
Cox11
Cyp20a1
Cpd
Dtd2
Rabep1
Atp5o
Fcor
Cbs
Trrap
Pi4k2a
Ccdc77
Tars
Zfp91
Lpxn
Angptl6
Leprot
Actn2
Rab23
Zdhhc3
Exosc7
Suco
Rchy1
Rhebl1
Pars2
Tbck
Aimp1
Mthfd1
Psip1
Pou2f1
Hikeshi
Chchd6
Ap1m1
Tarsl2
Rnf40
Ccdc189
Pacs2
Eif2b2
Ranbp2
Celsr3
Rnf7
Slc33a1
Ccdc57
Cetn3
Oxnad1
Dph3
Cenpf
Rnf187
Phf7
Bap1
Ddx42
Ccdc47
M6pr
Zbtb6
Tmem39a
Anxa5
1810062G17Rik
Ppp1r21
Vapa
Nrd1
Klhdc10
Ufl1
Amz2
Als2
Ibtk
Troap
H2bc4
H2ac6
Snrnp70
Gtf2a1
Zfp119a
Zfp809
Paip2
Sf3b5
Fam214a
Rpl21
Bckdhb
Celf6
Max
Ccdc90b
Ankzf1
1700029J07Rik
Zfp846
Ufsp2
Cdc42se2
Uba6
Stil
Ppp1cb
Pbx3
Tomt
Lamtor1
Rlf
Hmgb2
Anapc10
Abce1
Myo5a
Poli
Ints7
Dtl
Med28
Spg11
Ap2s1
Unc13a
Npm1
Imp3
Psmd8
Shprh
Usp8
Cyb5b
Marchf8
Erc1
Vps33a
Prcc
Tfb1m
Mavs
Mapk8ip3
Rita1
Ddx54
Serinc1
Rad23b
Tmem126a
Tpmt
Kdm1b
Rfxap
Rnf14
Hacl1
Btd
Nfu1
Brms1l
Tmem237
Gpn3
Fam216a
Katnal1
Gtf3c1
D430042O09Rik
Tmem170
Itgb3bp
Efcab7
Gm3448
Gm3417
Tcte3
Ermard
Rpl3
Slc3a2
Elp1
Abitram
Lyrm4
Fars2
Chd8
Ddost
Fbxl4
Ints3
Ndufb7
Zswim1
Mier1
Wdr78
Lrrc20
Chrac1
Tm9sf4
Thg1l
Mlst8
Nufip2
Pnn
Trit1
Fkbp3
Rin1
Ccdc126
Zfp148
Kctd17
Akap8
Nktr
Msra
Tbl2
Gmcl1
Tmx4
Fignl1
Rxylt1
Mpzl1
Ccdc171
Xrn2
Dhrs7b
Ube2b
Rrp1
Zc3h6
Klhl18
Kif9
Rps29
Chd1l
Tmed2
Rhot1
Pigt
Timmdc1
Tsn
Zfp280d
Tomm7
Narf
Nmt1
Eif2b3
Pabpn1
Serac1
Gtf2h5
Ppt1
Supv3l1
Ndufaf4
Phrf1
Kntc1
Arl6ip1
Pak1ip1
C9orf72
Spag7
Cmtm6
Smarcal1
Khsrp
Csnk1g2
Fbxo5
Sertad3
Spryd7
Arih1
Tmem184c
Frg2f1
Foxj3
Rab33b
Dcp1a
Cep85
Sugp1
Mau2
Avl9
Zdhhc16
Exosc1
Hpf1
Rassf8
Ap1s1
Nudt9
Pop4
Mrpl42
Rad51ap1
D6Wsu163e
Aga
Rab43
Papss1
AW549877
Zswim9
Lig1
Ldah
B4galt5
Zfp788
Mettl1
Eef1akmt3
Cnih4
Zscan20
Timm22
Hat1
Iqch
Aagab
Tusc3
Zgrf1
Larp7
Adck2
Nup107
Chek2
Ntsr2
Snrnp48
Apc
Idi1
Mynn
Itfg2
Scg3
Aktip
Hace1
Rpf1
Nbeal1
Neurl4
2810408A11Rik
Aatf
Rbm27
Anks3
4930451G09Rik
Srsf1
Adpgk
Ubxn2b
AU041133
Anapc5
Coa7
Timm8b
Sdhd
Hmgn1
Tfg
E4f1
Tube1
Fam229b
Stk25
Slf2
Commd6
Ubap2
Wdr92
Pno1
Dld
Wdr62
Pdia4
Camsap1
Rap2a
Atf2
Dimt1
Wars2
Rundc1
Ptges3l
Myh9
Akap13
Pdss2
Rbm6
Ppp2ca
Ralgapa2
Stxbp5l
S100pbp
Yars
Zfyve1
Ahcyl2
Nipsnap3b
Mkrn1
Snap25
Terf1
Arhgap12
Mrps18c
Helq
Spdye4b
Rbak
Arrb2
Bard1
Gabpb2
Tmcc1
Cop1
Kyat3
Dgcr8
Nubpl
Gmfb
Sgta
Htt
Urgcp
Rnf141
9430015G10Rik
Zcchc7
Cep20
Dynlrb1
Prnp
Prn
Ppp1r8
Dguok
Rnpc3
Npat
Atm
Pgap2
Ptger4
Nup98
Styx
Zfand1
Cnpy3
Chordc1
Dtwd2
Scamp5
Rce1
Rhbdd2
Gpank1
Csnk2b
Mbip
Nf1
Rubcn
Iffo2
Pyroxd1
Tpd52l2
Phf20
Ptprn2
Zfp623
Ift140
Cramp1l
Aspscr1
Galk2
Cops2
Rbm17
Mtch2
Fbxl19
Sh2b1
Wrn
Purg
Mfsd14b
Csf2ra
Rbm11
1110051M20Rik
Zbtb40
Tbc1d10b
Mylpf
Nsrp1
Rangap1
Pcm1
Smndc1
Pibf1
Dis3
Tyw3
Cryz
Lta4h
Ssh2
Pisd
Mtmr10
Rab6a
Golph3l
Pip4k2c
Tulp3
Znrf2
Zdhhc1
0610009B22Rik
Atp6v0e
Nicn1
Qars
Dtnbp1
Mapkbp1
Stag1
Ttc8
Entpd4b
Entpd4
Ube3a
Calm2
Pcca
Rad21
Ndufs5
Hsd17b12
Paxip1
Vmac
Ndufa11
5031439G07Rik
Kifc5b
Hint3
Zfp664
Ccdc92
Capn7
Asnsd1
Asdurf
Kiz
BC048403
Gfpt1
Crnkl1
Cfap61
Sys1
Polk
Cert1
Nagk
Ssbp2
Rbm39
Spryd3
Drosha
6030458C11Rik
Wasf1
Cdc40
Lyrm1
Dcun1d3
Sgo2a
Pdcl
Kin
Atp5c1
Snx8
Cep78
Rab40c
Cd2ap
Ostm1
Arl4a
Nudcd3
Rnf13
Nudt16
Klhl25
Pbx1
Ndufaf5
Esf1
Dnpep
E2f5
Psmd12
Plaa
Srpk1
Trim33
Nck1
Immp2l
Tusc1
Tatdn2
Rsad1
Agl
Gls
Slc35f5
Upf2
Zfp874a
Pstk
Fam219a
Dnaic1
Hspa9
Slc25a27
Cyp39a1
Spag9
Glra1
Gid4
Ezh1
Faf1
Rbx1
Csde1
Setd3
Ccnk
Trim23
Trappc13
Shld3
Cycs
Hint2
Arfgap2
Letm1
Vdac2
Srek1
Nampt
Svop
Homez
Mthfd2
Ercc6l2
Tfpt
Prpf31
Chid1
Zfp438
Rspry1
Psme3ip1
Otud1
Paxx
Zswim7
Ttc19
Adipor1
Nupl2
Polr2b
Noa1
Trip11
Mri1
Actr3b
Efhc1
Fitm2
Rptor
Zfp869
Acly
Gbe1
Aldh3a2
Mis18a
Cblb
Golm2
Garnl3
Ttc16
Ptrh1
Nuf2
G3bp2
Snapc1
Hacd2
Nub1
Dcbld2
Zfp868
Necap1
Prdx3
Uso1
Arid4a
Zfp3
Tbrg1
Tox4
Rab2b
Rgl1
Arpc5
Haus4
Zfp871
Saxo2
Efl1
N6amt1
Cstf1
Aurka
Atg10
Yeats4
Kif23
Trim41
Ap3m2
Tpm3
Bdh1
Ankrd40
Rasa1
Edem2
Tnrc6b
Plekha1
Casc3
Setdb2
Gm45935
Cab39l
Stard4
Sipa1l1
Prkdc
Mcm4
Acaa1a
Uxs1
Tspyl4
Ube2t
Myd88
Ivd
Osbpl9
Cdip1
Msh3
Dhfr
Wdpcp
Mdh1
Smpd3
Tax1bp1
Pgrmc2
Zfp523
Insig1
Ppme1
C2cd3
Ints10
Zhx1
Clp1
Erlec1
Asb3
Endov
Smim27
Topors
Cbx5
Ier3ip1
Hnrnpa1
Fbxo25
Naaa
Grin1
Psmd5
Tent2
Dync1i2
Kdsr
Zfp94
Nedd8
Gmpr2
Med31
4930563E22Rik
Pacrgl
Tmco1
Clock
Spata5l1
Rab39
Ralgps1
Arnt
Gpatch8
Zfp473
Vrk3
Spout1
H2az1
Cnot1
Cplane1
Swap70
Tcta
Rhoa
Pabpc1
Wdr33
Tbc1d14
Ap4e1
Atp7b
Alg11
Rbm26
Tmem138
Cyb561a3
Ccng1
Itsn1
Cryzl1
Supt20
Gpd2
Tmem30a
Pdp2
Hdac4
Rpl7
Rdh10
Adss
Eloc
Tmem175
Gak
Lmtk2
Rtca
Mtrr
Nudt15
Mnd1
Magohb
Hdac2
Gigyf2