ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499117 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◣ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Ccdc110
Cdk12
Ercc6l2
Wdr77
Atp5pb
Styxl1
Mdh2
Dhx8
Faap20
Mrpl28
Lrrn2
Psmd5
Mtf2
Rbm39
Supt5
Tmem270
Denr
Ankrd39
Pcdhga12
Zfp317
Qrich1
Nop14
Grk4
Porcn
Rraga
Trappc3
Stk38
Snrpe
Mib2
Phc2
Dhx32
Micos10
Lima1
A2m
Ccdc88c
Ahcyl1
Tnfrsf21
Rc3h2
Prdm14
Lif
Lrpap1
Mapk14
Slc26a8
Gjc1
Scamp5
Mterf1b
Tmem14a
Cst3
Zfp42
Gprc5b
Eif1ad
Banf1
Vps18
Gdf5
Timm22
Mterf1a
Polr3k
Vav2
Ireb2
Mettl16
Slc7a3
Rac3
Abcf2
Cstdc2
Slc25a1
Fbxo27
Abca14
Armcx1
Ephb3
Usp48
Pik3r4
Fntb
Surf6
Pdzd9
Zfp638
Basp1
Trp53bp1
Pou2f2
Mrps14
Arf3
Scnn1g
Hlf
Sec23ip
Ccdc126
Snai1
Zfp623
Npr1
Kif18a
Col1a1
Rae1
2410137M14Rik
Stxbp4
Cox11
Scaf4
B9d1
Ell2
Spp1
Zfp658
Eif5a2
Pafah1b3
Rnf10
Bod1l
Naa38
Cyb5d1
Ankfy1
Stk35
Sfi1
Stk11ip
Slc36a1
Ube2d3
Btbd10
Rab27a
Snx18
Huwe1
Drosha
6030458C11Rik
Pafah2
Bcl2l1
Gm5544
Polr2e
Dpy30
Trpm3
Stag3
Gpc2
Aadat
Elf3
Smarca5
Arl15
Rps19
Ephb1
Lix1
Slc12a9
Dnajb4
Fubp1
Rab37
Tmcc2
Cirbp
Ccdc194
Kcnh1
Pdzd2
Apmap
Rspry1
Psme3ip1
Wrap53
Trp53
Selenom
Crk
Tmem95
Rpl7a
Med22
Rif1
Nudt1
Adprhl1
Myo10
Mlf2
Dusp13
Pkd2
Vegfa
Tinf2
Piezo1
Mymx
Eif4a3
Rbm4b
Csrp1
Adnp
Cdc5l
Mrps28
Cpeb3
Cilk1
Nsun3
Ifrd2
Zbtb40
Zyg11a
Gm14393
Catip
Josd2
Prrt3
Gse1
Cdk5rap3
Ccin
Ppdpf
Phc1
Acaa1a
Myd88
Hspa4
Adra2b
Rnd3
Nat8f4
Atp5j2
Amt
Gstm1
Ddx20
Slc39a14
Psmb2
Trappc2
Ofd1
Gadd45b
Calr3
1700030K09Rik
Usp44
Edrf1
N4bp2l2
Med23
Arih2
Mgat5b
Cnpy1
Phf12
Rps3a1
Cep112
Mtnr1a
Tsc22d1
Trim36
Ncoa4
H2bc22
H2ac22
Grik4
Tcf7l1
Vegfc
Mcts2
Khsrp
Wdr27
1600012H06Rik
Phf23
Ifitm1
Rfx1
Bdh2
Dusp23
Med1
Nanog
Nme8
Adgrb2
Racgap1
Rbm14
Gm21992
Zfp819
Rapgef1
Zcrb1
Pphln1
Creld2
Alg12
Fam161a
Gm5155
Cnnm2
Irak2
Ist1
Tomm20
Efnb1
Cep85
Slc15a1
Rab38
Zfp148
Upf3a
Wnk1
Tsen54
Caskin2
Gm10634
Gm11100
Gm3411
Anp32e
Mllt1
Tns1
Rufy4
Vta1
Slc2a1
Ogt
Arnt
Tubgcp5
Sik2
Ntn5
Tmem143
Syngr4
Pibf1
Dis3
Gm3696
0610040J01Rik
Micalcl
Rnpc3
Fam118a
Megf8
Srsf10
Asph
Ergic2
Rabl3
Gtf2e1
Prickle1
Ddx58
Epb41l4a
Fubp3
Hmces
Gadd45g
Mrpl39
Flvcr2
Pelp1
Puf60
Bcat1
Dnah8
Lpar1
Slc25a45
Zscan22
Poc5
Riok2
Endov
Gba
Slc2a4
Slc12a6
Cdc42ep4
Spns1
Ptgr2
Tfap2c
Prmt8
Ahctf1
Adap1
Pcdhgc4
Uqcrc1
Sugp1
Mau2
Cwc25
Taf1c
Pnpla6
Serinc5
Cd164
Hsbp1
Mfsd8
Spdl1
Tmem242
Flrt3
Rbpj
Med11
Mc3r
Zcwpw2
Azi2
Stat6
Sap30bp
Recql5
Zfp960
D1Pas1
Pccb
Atg16l1
Smim10l1
Nyx
Scgb1c1
Ttc41
Hsp90b1
Rnf125
Rhpn2
H4f16
Banp
Tbc1d9b
Npm1
Mpc1
Mafb
Fitm2
Smg5
Pkia
Pipox
Arhgef17
Zfp286
Ninj2
Ndufaf3
Akap11
Hesx1
Meltf
Zfp566
Gm5165
Micu2
Rrp9
Parp3
Cdh23
Fmr1nb
Abhd18
Mob1b
Fem1b
Sh3rf3
Yod1
Sms
Islr2
Cep70
Lsr
Fam187b
Ripply1
Dpep2
Gpr1
2410141K09Rik
Lactbl1
Ntrk2
Mllt6
Vmn2r12
Serpina3i
Gcc1
Tonsl
Snx10
Slc6a19
Deptor
Col23a1
Haspin
Rpl7l1
Cenpt
Slc35b1
Rgs9
Dbr1
Samd9l
Adgrv1
Clu
Sema5b
Herc1
Entpd6
Adam19
Tmem211
Traf5
Clec12a
Ndufv1
Prcc
Mtss1
Prmt1
Cdc20b
Plin3
Ddhd2
Tpm1
Zfp386
Spr
Golm2
Trpm5
Inppl1
Ndufaf6
Radil
Top1mt
Ino80
Npepps
Nupl1
Slc38a9
Ube2q1
Dgkh
Tfap2a
Cox7a2l
Ttll1
Tmem47
Cped1
Sh3glb1
Cnot10
Mcf2
Epc1
Cdk20
Pcmtd1
Agbl3
Wnt7a
Rerg
Dnajc6
Polr1b
Polr3b
Fancg
Zfp428
Tmem218
Sun1
Med16
Lsm11
Gm38396
4833439L19Rik
Gm3558
Upp1
Tlr2
Nkain4
Zfp180
Pou5f1
Zmat5
Uqcr10
Cct8
Rnf4
Scn3a
Thada
Snx15
Calhm5
Insyn2b
Snapc5
Otos
Polr2b
Noa1
Nog
Gins4
Nsun6
Arl5b
Phf5a
Aco2
Nceh1
Srrt
Rpl12
Lrsam1
Ncapg
Adra2a
Ube2j2
Rpl26
Lrrc71
Snrpc
Zfp97
Lrrtm3
Psma1
Gpatch3
Rbm17
2010003K11Rik
Zfp574
Lrif1
Scn1a
Rnf150
Gm20594
Mmut
Cenpq
Ttc14
Dctn2
Kazald1
Gabrp
Adamts17
BC004004
Dock5
Galp
Ess2
Klhdc9
Tmem220
Rnf43
Npff
Arhgap28
Mrm2
Naa50
Atp6v1a
Slc25a11
Rnf167
Spata20
Ciao3
Gm33933
Atp8b5
Apbb2
Cemip
Tedc1
Pex10
Pdxdc1
Mpv17l
Defb1
Dhcr7
Parp11
Idnk
Gstm6
Steap1
BC107364
Wnt5b
Otx2
Gtsf1l
Fgf18
Chek2
Mycl
Nfkbiz
Pafah1b2
Add1
Terf1
Abr
Sik3
Ccnd3
Mob1a
Pds5b
Alg8
Kdm3a
Dmtn
Dnajc12
Alkbh7
Hoxa5
Ltbp1
Ptpru
1700008O03Rik
Tle3
Etv1
Ago2
Itgb6
Rrs1
Ddx47
Slfn10-ps
Atp2c1
Tmem18
Filip1
Srek1
Plekhg2
Nudt17
Homer3
D830030K20Rik
Tmem209
Ssmem1
Cryba4
Fam220a
Plekhb1
Stmn1
Rtca
Bmp4
Tbrg1
Wdr18
Chaf1a
Psmd8
Vps35l
Tcf3
Zfp345
Dhrs7b
Trim71
Mbtps1
Gjb3
Rbm26
Ltbp2
Brwd1
Tmprss9
Slc6a8
Zfp871
Rpl10a
Lman2
Sypl2
Slc35b4
Alad
Ocm
Pde7b
Zfp408
Tmem191c
Fam76a
Sdha
Ccdc127
Mycn
Tmem154
Arfip1
Synm
Lgi4
Apob
H2bc4
H2ac6
Cast
Gm51425
Zzz3
Qtrt2
Ccdc191
Ror2
Stk38l
Amz2
Tspyl1
Prepl
Camkmt
Drg1
Ccdc83
Nol11
Rprm
Gmppa
Ankrd13c
Psmd3
Bms1
Gpx1
Polr3e
Tmem101
Asb8
Plekho2
Trappc3l
Praf2
Dguok
Naa35
Sulf1
Gabpb2
Ryr2
Nr6a1
Apol7a
Rpl23a
Nid2
4833420G17Rik
Dppa5a
Tomm40l
Apoa2
Pop7
Sp2
Rcbtb1
Kif2c
Dars
Glipr1l3
Polr3f
Dzank1
Tgfb1i1
Fbxo15
Klhl18
Kif9
Gramd3
Cgnl1
Cluap1
1700037C18Rik
Gm1070
Sp1
Gm6712
Ube2d2a
Lpar6
Timp4
Sema6c
Pde1b
Fcor
Tgfb3
Plk2
Gcat
Adgrg5
Dcbld1
Cbx5
L3mbtl2
Rpusd1
Chtf18
Crybg1
Timm21
Phlpp1
Ly6k
Itga9
Abca1
Psph
Cct6a
Cdipt
Mad1l1
Cdiptos
Zfp493
Vstm2l
Hcrtr1
Cox6b1
Asb16
Thap1
Pcdhgb8
Pglyrp1
Hvcn1
Zfp689
Ccdc63
Gid8
Dido1
Nectin2
Kctd7
C2cd4b
Msi1
Pemt
Pigo
Pfkfb4
Zfp622
Il33
Ccdc62
Taf1b
Zfp947
Hsd17b6
Pbld2
Hnrnph3
Rbm25
Donson
Relch
Pign
Atg101
Lyzl6
Sbno1
Bcl3
Trim34a
Pde2a
Def6
Gnpnat1
Vmac
Ndufa11
Thbs2
Tent5b
Nanp
Mertk
Pts
Snrpg
Vkorc1
L1td1
Daam1
Coq8a
Cryzl2
Wif1
Abcb8
Prss48
Dcp1a
Abcg2
Cntnap2
Strip1
Cfap70
Egr2
Fbxo11
Nktr
Abl1
Fam189a1
Cd276
Saa3
Ywhag
Chd9
Agfg1
Cpsf6
Frzb
Prickle2
Cerkl
1700125H20Rik
Rpp38
Poglut3
Etfrf1
Casc1
Ppil2
Ldb1
Nlrc4
Ccdc142
Gucy1a2
A630001G21Rik
Pym1
Stap2
Mpnd
Wsb2
Upf3b
Gm45871
Tex9
Gsta4
Coq10a
Eif3f
Barx2
Fmnl3
Il18
Bco2
Rps23rg1
Kmt5c
Clcn4
Pgap3
C130074G19Rik
Pax2
Kifc3
Kcnmb2
Zfp13
Vps4b
Cdx1
Mcmdc2
Tha1
Cep170
Sdccag8
Cpsf4l
Plekhf2
Srp19
C1rl
Churc1
Ints9
Hmbox1
Zfp54
Cenpu
Mettl3
Afap1l2
Ndufa12
Acp2
Slc5a6
Atraid
Comtd1
Krcc1
Itgb3bp
Efcab7
Ovca2
Smc1b
Tph2
Liph
Atp5mpl
Timm13
Bambi
Atf7
Wdr38
Cfap100
Gchfr
Tfe3
Lrfn2
Hip1
Hck
Pum3
Tnfaip1
Ift20
Idh1
Virma
Dennd2c
Oas1g
Ptpn4
Icam4
Tnfrsf19
Slc15a4
Tex19.1
Dync1i2
Med12
Tafa5
Rpp40
Sbk2
Zkscan2
Disp3
Kdm4d
Cwc15
Dnajc21
Spock1
Taf5
Dpp6
Zfp369
Pik3r2
Parl
Rsad1
Mobp
Necab2
Atp6v0d1
Cidea
Gpx8
Xrcc5
Ppm1f
Kcnj6
Zfp595
Fbxw10
Ptrhd1
Cenpo
Zfp738
Copb2
Msh6
Gm3752
Slc12a2
Cd2bp2
Spc25
Thap7
Upk2
Kif26a
Dlgap4
Trim66
H4c18
Ints12
Gstcd
Mad2l1
Smim19
Slc20a2
Rlim
Sh2d5
Nfe2l1
Mad2l2
Mmachc
Ccdc163
Cep135
Pdk1
A830018L16Rik
Shpk
Ctns
Olfr15
Vps28
Utp3
Ska2
Prr11
Stat3
Get4
Slc33a1
Mtus1
Atp5g1
Slc39a13
Depdc1b
Btbd16
Prex1
Scamp3
Mad2l1bp
Serpinb9
Ddx24
Oas1a
Cblc
Spata33
Chmp1a
Rbm46
Thoc6
Hcfc1r1
Stil
Pacsin2
Slc43a1
Wipf1
Smc3
Cyhr1
Kifc2
Cox7b
Ufl1
Zfp955a
Tigd2
Knl1
Ssbp1
Nvl
Ints4
Tsnaxip1
Ranbp10
Prdx1
Frg1
Zc3h15
Stk40
Megf10
Cep164
Erap1
Map3k7
Gm3264
Tomm7
Rpl22
Chmp2a
Spg11
3300002I08Rik
Zwilch
Rpl4
Cstf3
Csde1
Naa16
Hif1an
Cd59b
Stx3
Rad51
Troap
Stx8
Cfap52
Dip2b
Pla2g15
Hoxb5
Poldip3