ChIP-Atlas: Target genes

Potential target genes for Trim28

Query protein: Trim28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3661344 | Neuro-2a
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Trim28's Target genes

◢ Trim28: Average

◢ ERX2617006: 3T3-L1

◢ SRX225200: Bone Marrow Cells

◢ SRX134774: B cells

◢ SRX134775: B cells

◢ ERX2714288: ES cells

◢ ERX2714290: ES cells

◢ ERX2714293: ES cells

◢ SRX088970: ES cells

◢ SRX1022090: ES cells

◢ SRX1022091: ES cells

◢ SRX1022092: ES cells

◢ SRX1022093: ES cells

◢ SRX1022094: ES cells

◢ SRX1022095: ES cells

◢ SRX1093872: ES cells

◢ SRX1421937: ES cells

◢ SRX1421940: ES cells

◢ SRX1556083: ES cells

◢ SRX1556087: ES cells

◢ SRX1556091: ES cells

◢ SRX202997: ES cells

◢ SRX202998: ES cells

◢ SRX2228735: ES cells

◢ SRX2228736: ES cells

◢ SRX2529733: ES cells

◢ SRX2529735: ES cells

◢ SRX4159247: ES cells

◢ SRX4159248: ES cells

◢ SRX4159249: ES cells

◢ SRX4159250: ES cells

◢ SRX4159251: ES cells

◢ SRX4159252: ES cells

◢ SRX5140871: ES cells

◢ SRX5140872: ES cells

◢ SRX5140873: ES cells

◢ SRX5140875: ES cells

◢ SRX5140876: ES cells

◢ SRX5388086: ES cells

◢ SRX5388092: ES cells

◢ SRX5388094: ES cells

◢ SRX581836: ES cells

◢ SRX2228737: Hepa 1-6

◢ SRX3398411: Hepa 1-6

◢ SRX2104771: MEF

◣ SRX3661344: Neuro-2a

◢ SRX3661345: Neuro-2a

◢ SRX2775263: Th17 Cells

◢ SRX151985: Thymocytes

◢ SRX151986: Thymocytes

◢ SRX3307682: Treg

◢ SRX3307684: Treg

◢ Trim28: STRING

Plagl1
Nnat
Gpbp1
Inpp5f
4931428F04Rik
Kcnn1
Myadm
Atg16l2
Rrp8
Ilk
Ap1s2
Insm2
Kansl1l
Nap1l5
Tbl1xr1
H2-L
H2-D1
LOC547349
Tnip1
Mllt10
Ifngr2
Sp4
Sun2
Crip1
Meig1
Dclre1c
Nfic
Wrap53
Trp53
Nhlrc1
Foxj2
Ttc32
Islr2
Immp2l
Yy1
Scrn3
Cir1
Nfkb2
Cdh11
Ptpn2
Jmjd1c
Gata2
Sirt2
Nfkbib
Rab10
Mcph1
Six1
Pik3r1
Ccdc107
Gid4
Rel
Degs1
C2cd4b
Vezf1
Sec23b
Rbbp9
Micu3
Abtb1
Gnas
Pcnx
Relb
Pdzd2
Phf10
Pnpla3
Adamts9
Mtmr14
Azin1
Igf2
Cks2
Vps37a
Cnot7
Ggnbp2
Rusc1
Sumo1
Sp1
Pink1
Tpr
Odr4
Nfkbia
Junb
Tmf1
Gm11213
Ctf1
Bcl7c
Arhgef4
Gm3448
Gm3417
9030025P20Rik
Golm2
Zc3h12a
Olfr1287
Parp8
Zfhx4
Trim67
Zfp740
Csad
Ampd3
Bcl3
Acsl1
Gm3435
Phlda1
Eri1
Celf4
Rfx1
Sos1
9130401M01Rik
Stmn1
Nr2c2
Zfp605
Gtpbp6
Cd83
Glcci1
Specc1l
Camk1d
Hemk1
6430571L13Rik
Mterf1a
Prr12
Kdm3a
Cbx1
Mat2a
Phlpp2
Ago1
Pacc1
Xndc1
Rnf121
Rab8a
Ssbp2
Kansl1
Gata4
Pigv
Lrch3
R3hdm2
2310033P09Rik
Nemf
Pak4
Nrbp2
E2f1
Thap1
Srsf4
Vmn1r65
H3f3a
Jag1
Arf3
B2m
Fh1
Cdc42
Hjurp
A730008H23Rik
Tet3
Tox2
Eprs
Mrps36
Tnks1bp1
Elp5
Ctdnep1
Usp42
Xpot
Mios
Atf4
Phip
Adgrf2
Phc1
Mcu
Rbm19
Pdik1l
Capg
Kpnb1
Zfp738
Ttc17
Dazl
Mthfd2
Cep135
Ap2s1
Jdp2
Ap1g1
Srsf5
Lhx4
Klf11
Mest
Spock1
Cyth2
Slf2
Usf3
Ppp2ca
Pnpla8
Irf1
H3f3b
Crebrf
Sf1
Sfi1
Tcam1
Smarcd2
Hp1bp3
Ppia
Rev1
Heca
Cdc14a
Usp49
Tmem65
Pcmt1
Lats1
Slc26a6
Commd1
Zrsr1
H2-K1
Mettl9
Nap1l1
Atp13a2
Sptan1
Adcy9
Ttc3
Pigp
Brsk1
Cldn34-ps
Cbln3
Khnyn
Ppp1r18
Cyrib
Nrm
Hnrnpu
Lamp1
Pcm1
Rfx2
Slc12a4
Zfp316
Katna1
Phactr4
Snx25
Endog
Sqstm1
Ep300
Ankrd11
Slc39a10
Mcm9
Safb2
Safb
Fjx1
Zfp384
Zfp91
Lpxn
Fus
Bri3
Gatad2a
Braf
Cela1
St3gal2
Sulf2
Pmm1
Cops3
Pex7
Tmem267
Dnah12
Bclaf1
Mdm2
Tlr2
Bcr
Tmem125
Ctdsp1
Tpgs1
Madcam1
Il6st
Rrp7a
Tmem266
Zhx3
Rev3l
Fnta
Hnrnpab
Rps29
Cdkn2aip
Banp
Srebf2
Zbed4
Abcd3
Trappc11
Rwdd4a
Xpr1
Chrac1
Sephs1
Tnks
Nckap5l
Srek1
Tusc3
Ccdc88a
Errfi1
Amfr
Sub1
Ahctf1
Zdhhc2
Wdr62
Klf9
Psma4
AY074887
Nrbp1
Cldn34d
Immt
Tmem240
Slc25a15
Phf20l1
Mettl1
Eef1akmt3
Slbp
Slc30a5
Tra2b
Usp12
Tm9sf3
Heatr3
Slc38a2
Emp3
Ccdc114
Mafg
Kat6a
Nipsnap2
Pprc1
Yeats2
Gsr
Vps37c
Eea1
Lrrc23
Ppm1a
Rcc2
Zzz3
Zfp868
Ing2
Serinc2
9930021J03Rik
Zbtb17
Zfp1
Nsd3
Letm2
Rgs19
Lrrn2
Pbx3
Lkaaear1
Klhl35
Pcid2
Cul4a
Vkorc1l1
Rasal2
Fam76a
Ing5
Dtymk
Spg7
Zc3h14
Pde4a
Eif1
Prmt1
Zfp869
Gm527
Srd5a3
Dscc1
Insm1
Dcbld2
Brpf3
Trp53bp2
Tab2
Dazap2
Tmem192
Leprotl1
Polk
Cert1
Cep131
Champ1
Traf3
Tbk1
Arrdc3
Kctd2
Atp5h
Taf5
Pdpk1
Ing1
Gpat4
Cars2
Kdm1a
Tent2
Dlg4
Alx3
Csrnp2
Kctd3
Nt5c2
Ubl3
Dusp3
Cfap97d1
Map2k7
Pycrl
Tnpo1
Oaz1
Zfp592
Fcho2
Fbxo42
Rasa2
Spen
Eif5
Smarcd1
Lbr
Wasf1
Cdc40
Lactb
Ube2j2
Hmgxb4
Synrg
Casc3
Hnrnpr
Tbc1d10b
Mylpf
Zbtb2
Mrpl23
Insig1
Atxn7l3
Usp21
Ebf4
Ccnl2
Rnf149
Pogk
Pkmyt1
Chpt1
Tnrc6a
Rufy2
Naf1
Neurod1
Trappc3
Map7d1
Kpna1
Setd1a
Ssb
Vps26a
Klhl24
Tank
Plod1
2510039O18Rik
Vmn1r2
Zkscan17
Git2
Ankrd13a
Sft2d3
Hnrnpa3
Mbtps1
Cnot1
Olfr1467
Gmeb2
Capza2
Dennd6b
Acvr1b
Zfp653
Txnrd3
Stag1
Pold1
Nr1h2
Prep
Plcg1
Ptov1
Gnb2
Ubr4
Tex30
Tssk1
Dgcr2
Chuk
Gm51573
Zfp821
Pan3
Evi5
Tprkb
Nat8f1
Zranb2
Desi2
Fam20b
Caprin1
Cep350
Gm4981
2210016F16Rik
Defb7
Atp2b1
N4bp1
Agtpbp1
Tcta
Rhoa
Birc5
Ubxn2a
Grb2
Sec61a2
Stx11
Sstr3
Sntb2
Ltv1
Hmgcr
Atr
1700065D16Rik
Gclm
Cnnm4
Rad9b
Utp4
Derpc
Chtf8
Gp9
Rcc1l
Sptlc2
Inpp4a
Spice1
Snx18
Rps19
Luc7l2
Patl1
Nfat5
Zfp341
Larp4
Eloa
Atg10
Rnf2
Hsp90aa1
2410002F23Rik
Cmip
Spcs3
Sbf2
Rrad
Cpsf6
Nck2
Evi5l
Ddi2
Bbs2
Atrnl1
Tlk1
Nanos1
Ankrd52
Hnrnph1
Itgb1
Wiz
Cep170
Sdccag8
Carnmt1
B230219D22Rik
Erc1
Tcp11l2
Letmd1
Btf3
Hexb
Anks3
4930451G09Rik
Elavl1
Gstt2
Ncoa7
Golga5
Zfp24
Gstz1
Pomt2
Dnajc1
Npepl1
Ptpn11
Wnt10b
Lsm12
G6pc3
Tbc1d15
Prrc2a
Zmym4
Prkaa1
Phldb1
Mxd1
Ccnb1
Primpol
Casp3
Tead1
Gm21119
Cux1
Gm15319
Eif4g1
Ywhab
Setx
Lonrf1
Sdhaf2
Fer
Echdc3
Cpsf7
Cdkn2d
Anapc5
Cbfb
Rnf166
Nckap1
Mon2
Eif4g3
Als2
Rabgap1
Mob1a
Ralbp1
Pum2
Rpl13
Uxs1
Odf2
Nup43
Mapk8ip1
Rmi1
Hnrnpk
Stox2
Cers5
Snx5
Mgme1
Cmtm4
Nr4a2
Spata5l1
Rheb
Ninj1
Fbl
C1galt1
Homer1
Shld2
Glud1
4931408C20Rik
Rnf114
Npm1
Usp22
Mettl23
Jmjd6
Terf2
Xkr6
Nr1d2
Twsg1
Cd164
Rasgrp2
Cdc42bpa
Syde2
Ptprf
Ppp2r2d
Mecp2
Mapk1ip1
Macrod2
Fbrsl1
Angel2
Mindy4
Hacd2
Lpcat4
Sort1
Slc22a23
Marcks
Rhno1
Foxm1
Sumo2
Mob3c
Hbp1
Rcl1
Btbd8
Srsf2
Mfsd11
Hint3
Chmp3
Stau1
Mfsd13b
Lrrc8d
Cdr2
Tmem131
Ccdc91
Pip4k2c
Gabpb1
Zbtb11
Spast
Wtap
Smurf1
Mtx3
Fam171a1
Rbm48
Pex1
Baz2b
Ccdc102a
Stxbp5l
Pgm2l1
Cirbp
Pyurf
Slc9a1
Atp5g3
E2f8
Galc
Btbd1
Lrrc8a
Rnf216
Cebpg
Prdm4
Micu2
Arglu1
Bard1
Pcgf5
Ndufab1
Srrm2
Sap130
Dcakd
Marchf8
Bbc3
Lmbr1l
B3glct
Fam214b
Rhbdf1
Mpg
Hdgfl3
Ppp2r5a
Slc25a4
Rnf139
Fam98c
Dcaf1
Ppa2
Prag1
Elf2
Vash2
Ginm1
Tab1
Raly
P4ha1
H3c15
H3c14
H2ac19
H2ac18
Gm3383
Serf2
Pdcd4
Srsf6
Cyld
Smpd3
Brd4
Fmc1
Serpinb6a
Pfn1
Tacc1
Scrib
Sart1
Eno3
Eaf2
Tmem263
Taf9
Ripk1
Rad17
Map1lc3a
Fhl4
Fbxo4
Dennd4a
Ak6
Nup205
Tomm20
Ddhd2
Slc25a33
Erbin
Skil
Ctcf
Trank1
Sh3tc2
Naa25
Capzb
Xrn2
Syf2
Saraf
Rasa1
Nol4l
Mxd4
Eif3j2
Eif3j1
Ccm2
Hsp90ab1
Trim28
Wdr43
Camsap2
Tada1
Lrp6
Tmem165
Gopc
Btbd9
Akr1c13
Klhl2
Smurf2
Nfatc3
Klhl5
Naa50
Atp6v1a
Dip2b
Kmt2c
Ifrd1
Tm2d2
Adam9
Zfand5
Fam78b
Ptges3
Nfyc
Rxylt1
Dip2a
Ppp1r9a
Keap1
Sec63
Abhd17b
1110059E24Rik
Asxl1
Pcdhgb2
Pcdhga5
Mfn2
Ebag9
Krcc1
Kdelr2
Fbxo34
Rnf111
Nrbf2
Dchs1
Cmas
Eps15
Smarcc1
Wee1
Nrtn
Gadd45a
Pknox1
Rnf146
Wdr41
Upf2
Tbca
Rasd1
Cnot2
Poldip3
Trrap
Peli1
Gabarapl2
Ube2e3
Rpl17
Npcd
Cbx6
BC031181
H4f16
H2aj
Ino80d
Polr3g
Mblac2
Eif4b
Vps13b
Map3k3
Susd6
Ccny
Ptgr2
Syt14
Dennd4b
Ube2n
Trmt1
Nacc1
Slc30a3
Ypel5
Sipa1l1
Myod1
Mrpl22
Maco1
Hsdl1
Gemin5
Dnaaf1
Cnn3
Fbxo31
Resp18
Nup35
Ankrd10
Tfdp1
Enah
Etnk1
Itgb1bp1
Cpsf3
Slc16a1
Dctd
Ubxn7
Enpp1
Wrn
Ubfd1
Srp72
Purg
Piezo1
Ears2
Smg7
Bcl7b
Agpat5
Pyroxd1
Wdpcp
Mdh1
Tet2
Ing3
Sod1
Usp39
0610030E20Rik
Mettl25
Ccdc59
Urb2
Tanc2
Taf5l
Slc30a9
Slc27a4
Pptc7
Mylk2
Far1
Cox20
Cbfa2t3
Rpia
Wdr45b
Eif4ebp2
Mthfd1l
Klhl21
Ttc13
Raph1
Arv1
Akap13
Tacc3
Tmem129
Kansl3
Fer1l5
Fam214a
Ube2d3
Tmx4
Strn3
Ap4s1
Stam
Ptdss1
Pcif1
Mterf3
Dnajc10
Agpat2
Rex1bd
Thbs4
Bclaf3
Tti1
Rprd1b
Rae1
Psme2
Micall2
Arhgap17
Rnf31
Tdrd7
Tango6
Pfn2
Grk5
Syt9
Gigyf2
Cnga3
Atp13a1
Tcf25
Sp3
Cbfa2t2
Acbd3
Jade1
Etv1
Arsb
Acin1
Man2c1
Ube3c
Prkab2
Lpgat1
Hic2
1700123O20Rik
Bzw1
Insr
Nbeal1
Sil1
Syncrip
Tsen15
Hlcs
Dnaja1
Cnih4
Bcdin3d
Fchsd2
Rsrp1
Arfgef2
Mcm7
Ap4m1
Stat5b
Dvl3
Rdx
E2f7
Dstn
Clock
Rnf187
Cdc16
Znhit1
Plod3
Pou3f1
Timeless
Zfp318
Inpp5d
Npepps
Naa60
Eif3c
Srp9
Ipo7
Srcap
Peak1
Hmg20a
Carm1
Myl4
Ldlrap1
Itsn2
Cdc27
Vps4a
Pkd1
Ywhaz
Lmtk2
Sharpin
Maf1
Gm35339
Fnbp1
Sesn1
Cep57l1
Mepce
Unk
Mbtps2
Zcwpw1
Gan
Pabpn1
Rbpms
Zfp433
Gm32687