ChIP-Atlas: Target genes

Potential target genes for Trim28

Query protein: Trim28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3661344 | Neuro-2a
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Trim28's Target genes

◢ Trim28: Average

◢ ERX2617006: 3T3-L1

◢ SRX225200: Bone Marrow Cells

◢ SRX134774: B cells

◢ SRX134775: B cells

◢ ERX2714288: ES cells

◢ ERX2714290: ES cells

◢ ERX2714293: ES cells

◢ SRX088970: ES cells

◢ SRX1022090: ES cells

◢ SRX1022091: ES cells

◢ SRX1022092: ES cells

◢ SRX1022093: ES cells

◢ SRX1022094: ES cells

◢ SRX1022095: ES cells

◢ SRX1093872: ES cells

◢ SRX1421937: ES cells

◢ SRX1421940: ES cells

◢ SRX1556083: ES cells

◢ SRX1556087: ES cells

◢ SRX1556091: ES cells

◢ SRX202997: ES cells

◢ SRX202998: ES cells

◢ SRX2228735: ES cells

◢ SRX2228736: ES cells

◢ SRX2529733: ES cells

◢ SRX2529735: ES cells

◢ SRX4159247: ES cells

◢ SRX4159248: ES cells

◢ SRX4159249: ES cells

◢ SRX4159250: ES cells

◢ SRX4159251: ES cells

◢ SRX4159252: ES cells

◢ SRX5140871: ES cells

◢ SRX5140872: ES cells

◢ SRX5140873: ES cells

◢ SRX5140875: ES cells

◢ SRX5140876: ES cells

◢ SRX5388086: ES cells

◢ SRX5388092: ES cells

◢ SRX5388094: ES cells

◢ SRX581836: ES cells

◢ SRX2228737: Hepa 1-6

◢ SRX3398411: Hepa 1-6

◢ SRX2104771: MEF

◣ SRX3661344: Neuro-2a

◢ SRX3661345: Neuro-2a

◢ SRX2775263: Th17 Cells

◢ SRX151985: Thymocytes

◢ SRX151986: Thymocytes

◢ SRX3307682: Treg

◢ SRX3307684: Treg

◢ Trim28: STRING

Plagl1
Nnat
Gpbp1
Inpp5f
4931428F04Rik
Myadm
Atg16l2
Rrp8
Ilk
Ap1s2
Insm2
Kansl1l
Nap1l5
Tbl1xr1
H2-L
H2-D1
Tnip1
Ifngr2
Sp4
Sun2
Meig1
Wrap53
Trp53
Foxj2
Ttc32
Immp2l
Yy1
Scrn3
Cir1
Nfkb2
Cdh11
Ptpn2
Jmjd1c
Gata2
Sirt2
Nfkbib
Rab10
Mcph1
Six1
Pik3r1
Ccdc107
Gid4
Rel
Degs1
C2cd4b
Vezf1
Sec23b
Micu3
Abtb1
Pcnx
Relb
Pdzd2
Phf10
Pnpla3
Adamts9
Mtmr14
Azin1
Cks2
Vps37a
Cnot7
Ggnbp2
Rusc1
Sumo1
Sp1
Pink1
Tpr
Odr4
Nfkbia
Tmf1
Bcl7c
Arhgef4
Gm3448
Gm3417
9030025P20Rik
Golm2
Parp8
Zfhx4
Trim67
Zfp740
Csad
Ampd3
Acsl1
Gm3435
Phlda1
Eri1
Celf4
Rfx1
9130401M01Rik
Stmn1
Nr2c2
Gtpbp6
Cd83
Glcci1
Specc1l
Camk1d
6430571L13Rik
Prr12
Kdm3a
Cbx1
Mat2a
Phlpp2
Ago1
Pacc1
Xndc1
Rab8a
Rnf121
Ssbp2
Kansl1
Pigv
Lrch3
R3hdm2
2310033P09Rik
Nrbp2
E2f1
Thap1
Srsf4
H3f3a
Jag1
Arf3
B2m
Fh1
Cdc42
Hjurp
A730008H23Rik
Tet3
Tox2
Eprs
Mrps36
Elp5
Ctdnep1
Usp42
Xpot
Mios
Atf4
Phip
Phc1
Mcu
Rbm19
Pdik1l
Kpnb1
Zfp738
Ttc17
Dazl
Mthfd2
Cep135
Ap2s1
Jdp2
Ap1g1
Srsf5
Lhx4
Klf11
Mest
Cyth2
Slf2
Usf3
Ppp2ca
Pnpla8
Irf1
H3f3b
Crebrf
Sf1
Sfi1
Smarcd2
Hp1bp3
Ppia
Rev1
Heca
Cdc14a
Tmem65
Usp49
Pcmt1
Lats1
Slc26a6
Commd1
Zrsr1
Mettl9
H2-K1
Nap1l1
Sptan1
Adcy9
Ttc3
Pigp
Brsk1
Khnyn
Cbln3
Cyrib
Ppp1r18
Hnrnpu
Lamp1
Pcm1
Rfx2
Slc12a4
Zfp316
Katna1
Phactr4
Snx25
Ep300
Ankrd11
Slc39a10
Mcm9
Safb2
Safb
Fjx1
Zfp384
Zfp91
Lpxn
Fus
Bri3
Gatad2a
Braf
St3gal2
Sulf2
Pmm1
Cops3
Pex7
Tmem267
Bclaf1
Mdm2
Tlr2
Bcr
Tpgs1
Il6st
Rrp7a
Tmem266
Fnta
Rev3l
Hnrnpab
Zhx3
Rps29
Cdkn2aip
Banp
Srebf2
Zbed4
Abcd3
Trappc11
Rwdd4a
Xpr1
Chrac1
Sephs1
Tnks
Nckap5l
Srek1
Tusc3
Ccdc88a
Errfi1
Amfr
Sub1
Ahctf1
Zdhhc2
Wdr62
Klf9
Psma4
AY074887
Nrbp1
Immt
Tmem240
Slc25a15
Phf20l1
Mettl1
Eef1akmt3
Slc30a5
Slbp
Tra2b
Usp12
Tm9sf3
Heatr3
Slc38a2
Mafg
Emp3
Kat6a
Nipsnap2
Pprc1
Yeats2
Gsr
Vps37c
Eea1
Ppm1a
Rcc2
Zzz3
Zfp868
Ing2
Serinc2
9930021J03Rik
Zfp1
Zbtb17
Pbx3
Rgs19
Lrrn2
Letm2
Pcid2
Cul4a
Vkorc1l1
Rasal2
Ing5
Fam76a
Spg7
Zc3h14
Eif1
Prmt1
Zfp869
Gm527
Srd5a3
Insm1
Dscc1
Dcbld2
Brpf3
Trp53bp2
Tab2
Dazap2
Tmem192
Leprotl1
Polk
Cert1
Cep131
Champ1
Traf3
Tbk1
Kctd2
Atp5h
Taf5
Pdpk1
Ing1
Gpat4
Kdm1a
Tent2
Dlg4
Kctd3
Csrnp2
Nt5c2
Ubl3
Dusp3
Map2k7
Pycrl
Tnpo1
Zfp592
Oaz1
Fcho2
Fbxo42
Rasa2
Spen
Eif5
Smarcd1
Lbr
Wasf1
Cdc40
Lactb
Ube2j2
Hmgxb4
Synrg
Casc3
Hnrnpr
Zbtb2
Mylpf
Tbc1d10b
Mrpl23
Insig1
Atxn7l3
Usp21
Ebf4
Ccnl2
Rnf149
Pogk
Pkmyt1
Chpt1
Tnrc6a
Rufy2
Neurod1
Naf1
Setd1a
Ssb
Vps26a
Kpna1
Klhl24
Tank
2510039O18Rik
Zkscan17
Hnrnpa3
Git2
Mbtps1
Sft2d3
Cnot1
Gmeb2
Dennd6b
Capza2
Acvr1b
Zfp653
Txnrd3
Stag1
Nr1h2
Prep
Plcg1
Ptov1
Ubr4
Tex30
Dgcr2
Chuk
Pan3
Evi5
Zfp821
Tprkb
Nat8f1
Zranb2
Desi2
Fam20b
Caprin1
Cep350
Atp2b1
Tcta
Rhoa
N4bp1
Agtpbp1
Birc5
Ubxn2a
Grb2
Sec61a2
Stx11
Sstr3
Sntb2
Ltv1
Hmgcr
Atr
1700065D16Rik
Gclm
Cnnm4
Rad9b
Sptlc2
Rcc1l
Inpp4a
Utp4
Spice1
Snx18
Derpc
Chtf8
Luc7l2
Rps19
Nfat5
Zfp341
Larp4
Patl1
Eloa
Atg10
Hsp90aa1
2410002F23Rik
Cmip
Rnf2
Spcs3
Sbf2
Rrad
Cpsf6
Nck2
Evi5l
Ddi2
Bbs2
Atrnl1
Tlk1
Nanos1
Hnrnph1
Itgb1
Wiz
Sdccag8
Cep170
Ankrd52
Carnmt1
B230219D22Rik
Erc1
Tcp11l2
Btf3
Letmd1
Hexb
Anks3
4930451G09Rik
Elavl1
Golga5
Zfp24
Ncoa7
Dnajc1
Npepl1
Pomt2
Gstz1
Ptpn11
Lsm12
Tbc1d15
Zmym4
Prkaa1
Prrc2a
Phldb1
Mxd1
Ccnb1
Primpol
Casp3
Eif4g1
Tead1
Ywhab
Setx
Cux1
Lonrf1
Sdhaf2
Fer
Echdc3
Cpsf7
Cbfb
Rnf166
Nckap1
Anapc5
Mon2
Eif4g3
Als2
Rabgap1
Mob1a
Pum2
Uxs1
Rpl13
Ralbp1
Odf2
Mapk8ip1
Rmi1
Hnrnpk
Stox2
Cers5
Snx5
Mgme1
Cmtm4
Spata5l1
Rheb
Nr4a2
Ninj1
Homer1
Fbl
C1galt1
Shld2
Glud1
4931408C20Rik
Rnf114
Npm1
Mettl23
Jmjd6
Terf2
Xkr6
Usp22
Nr1d2
Cd164
Cdc42bpa
Twsg1
Syde2
Rasgrp2
Ppp2r2d
Mecp2
Mapk1ip1
Macrod2
Fbrsl1
Angel2
Lpcat4
Sort1
Mindy4
Hacd2
Slc22a23
Rhno1
Foxm1
Sumo2
Hbp1
Mob3c
Rcl1
Btbd8
Srsf2
Mfsd11
Hint3
Chmp3
Stau1
Mfsd13b
Lrrc8d
Cdr2
Ccdc91
Pip4k2c
Tmem131
Gabpb1
Zbtb11
Spast
Wtap
Smurf1
Mtx3
Fam171a1
Rbm48
Pex1
Baz2b
Stxbp5l
Pgm2l1
Slc9a1
Atp5g3
E2f8
Galc
Pyurf
Btbd1
Rnf216
Lrrc8a
Prdm4
Micu2
Cebpg
Arglu1
Bard1
Ndufab1
Srrm2
Pcgf5
Sap130
Marchf8
Bbc3
Lmbr1l
B3glct
Fam214b
Rhbdf1
Hdgfl3
Ppp2r5a
Slc25a4
Rnf139
Fam98c
Dcaf1
Ppa2
Elf2
Prag1
Vash2
Ginm1
Raly
P4ha1
H3c15
H3c14
H2ac19
H2ac18
Tab1
Serf2
Srsf6
Pdcd4
Cyld
Smpd3
Brd4
Fmc1
Tacc1
Scrib
Sart1
Pfn1
Eaf2
Tmem263
Taf9
Serpinb6a
Ripk1
Rad17
Map1lc3a
Fhl4
Fbxo4
Dennd4a
Ak6
Nup205
Tomm20
Slc25a33
Ddhd2
Erbin
Ctcf
Trank1
Skil
Sh3tc2
Naa25
Capzb
Syf2
Xrn2
Saraf
Rasa1
Nol4l
Mxd4
Eif3j2
Eif3j1
Ccm2
Hsp90ab1
Trim28
Wdr43
Camsap2
Lrp6
Tmem165
Tada1
Gopc
Btbd9
Klhl2
Smurf2
Klhl5
Naa50
Dip2b
Nfatc3
Atp6v1a
Kmt2c
Ifrd1
Tm2d2
Adam9
Zfand5
Ptges3
Nfyc
Rxylt1
Dip2a
Ppp1r9a
Keap1
Fam78b
Sec63
Abhd17b
1110059E24Rik
Asxl1
Mfn2
Ebag9
Kdelr2
Fbxo34
Krcc1
Rnf111
Nrbf2
Dchs1
Cmas
Eps15
Smarcc1
Gadd45a
Pknox1
Rnf146
Wee1
Wdr41
Upf2
Tbca
Rasd1
Nrtn
Poldip3
Peli1
Trrap
Gabarapl2
Ube2e3
Rpl17
Npcd
Cnot2
Cbx6
Ino80d
H4f16
Polr3g
Mblac2
Eif4b
Vps13b
Map3k3
Susd6
Ccny
Syt14
Dennd4b
Ube2n
Ypel5
Sipa1l1
Nacc1
Maco1
Hsdl1
Gemin5
Dnaaf1
Cnn3
Fbxo31
Nup35
Ankrd10
Tfdp1
Enah
Itgb1bp1
Cpsf3
Slc16a1
Etnk1
Ubxn7
Enpp1
Wrn
Ubfd1
Srp72
Purg
Piezo1
Ears2
Dctd
Smg7
Bcl7b
Agpat5
Pyroxd1
Wdpcp
Mdh1
Tet2
Ing3
Sod1
0610030E20Rik
Mettl25
Ccdc59
Urb2
Tanc2
Taf5l
Slc30a9
Slc27a4
Pptc7
Far1
Cox20
Cbfa2t3
Rpia
Wdr45b
Eif4ebp2
Mthfd1l
Klhl21
Ttc13
Raph1
Arv1
Akap13
Tmem129
Tacc3
Kansl3
Fam214a
Ube2d3
Tmx4
Strn3
Ap4s1
Stam
Ptdss1
Pcif1
Mterf3
Dnajc10
Agpat2
Thbs4
Tti1
Rprd1b
Rae1
Bclaf3
Arhgap17
Rnf31
Psme2
Pfn2
Grk5
Tango6
Tdrd7
Syt9
Gigyf2
Atp13a1
Tcf25
Sp3
Cbfa2t2
Acbd3
Arsb
Man2c1
Ube3c
Prkab2
Lpgat1
Jade1
Hic2
Acin1
1700123O20Rik
Bzw1
Insr
Nbeal1
Sil1
Syncrip
Tsen15
Hlcs
Dnaja1
Cnih4
Bcdin3d
Arfgef2
Mcm7
Ap4m1
Fchsd2
Rsrp1
Nsd3
Dvl3
Rdx
Stat5b
E2f7
Dstn
Clock
Rnf187
Pou3f1
Cdc16
Timeless
Zfp318
Znhit1
Plod3
Npepps
Eif3c
Srp9
Ipo7
Peak1
Hmg20a
Carm1
Srcap
Naa60
Myl4
Itsn2
Cdc27
Vps4a
Pkd1
Ywhaz
Sharpin
Maf1
Lmtk2
Fnbp1
Mbtps2
Zcwpw1
Mepce
Pabpn1
Sesn1
Cep57l1
Unk
Gan
Zfp433
Gm32687
Pwwp2a
Zfp442
Sap30
Rbpms
Paip1
Kansl2
Bves
Rnf19b
Naxd
Dipk1a
Lpin2
Dnaja2
Gapvd1
Pdha1
Cmc2
Cenpn
Uri1
Larp4b
Washc4
Rrnad1
Prmt3
Map4k2
Jak2
Isg20l2
E2f2
Asns
Twf1
Ncoa3
Zfp12
Morf4l2
Sltm
Hmgn2
Aff4
Zfp428
Nrf1
Zc3h15
Usp25
Rab11fip2
Odc1
Mtus1
Mki67
Fbxl5
Ddx39a
Stk38l
Bcl2l1
Serinc3
Psme4
Rbbp7
Fbxo7
Hspa5
Sms
Tarbp1
Zfp358
Eif4e
C2cd5
Sumo3
Ppp2cb
Notch2
Get4
Zmynd11
Mcl1
Ddit3
Atf1
Cd47
Patz1
Ralgps2
Gtdc1
Mageb3
Ctdspl2
Ubr5
Ubqln1
Ptpn13
Nek7
Mbd6
Kri1
Kif2a
Ep400
Pdlim5
Slc7a5
Csk
Dip2c
Kcmf1
Ncoa5
Agpat4
Tdp1
Eml4
Efcab11
Cenpw
Actr2
Fbxl13
Armc10
Rab35
Adgrg1
Zdhhc3
Ubac1
Rest
Exosc7
Ctnnbip1
Rab5a
Plpp5
Upf1
Exosc6