ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706975 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◣ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Snx18
Kank1
Cars
Asic1
Cd93
Nfe2
Alox5ap
Zfp879
Grm6
Ric3
Mnx1
Cmc2
Cenpn
Gm815
Aqp6
Ccna1
Kdm4c
Dcaf4
Sipa1l1
Lhx4
Coro2b
Usp25
Frmd4a
Frzb
Ednrb
Lrrc52
Mcf2
Morc1
Atg4c
Nrp1
Cdk19
Olfml1
Ubxn10
Pla2g2c
Snca
Gabrg2
Tspan15
Gsc
Stx18
Sema6d
Filip1
Tcstv3
Daam1
Spp2
Zfp516
Kcng3
Gjd2
Prkab1
Gnas
Fam171b
Nptx2
Gm4791
Coro2a
Ttll3
Pmfbp1
Nt5c2
Ina
Uts2r
Tex19.1
Gdf5
Cep250
Zfp608
Ablim1
Sgms1
Chga
Gm7244
Cldn3
Plekha7
Sytl3
Tmeff1
Ust
Mlph
Psmc6
Ero1a
Ndufaf4
Gnat2
Gm12500
Ampd2
Tshz2
Armcx1
Atp2b2
Tagln3
Vmn2r2
Bcas2
Gas2
Fancf
Slc17a8
Olfr1286
Pax3
Esrrb
4921524J17Rik
Atp8b4
Chst7
Krt8
Ypel1
Olfr1047
Olfr1046
Lrrn2
Pmp22
Timm8a1
Ctbp2
Neurod1
Lmo1
Ctrb1
Bmt2
Usp44
Lmo4
Gm5820
Zkscan1
Col6a6
Grpel1
Lix1
Rere
Ppia
Ifnb1
Slc6a5
St3gal1
Akap17b
Dmrta1
Kat2a
Hspb9
Bhlhe22
Mical2
Sgk1
Lsm14a
Taf1d
4931406C07Rik
Greb1
Edar
Senp6
Dct
Dock10
Cdh23
Zfp362
Fezf2
1700017B05Rik
Rabepk
Kif2c
L3hypdh
Jkamp
Thrb
Mid2
Ip6k3
1700003F12Rik
Eml1
Ntn4
Extl3
Trp53bp1
Med27
Astl
Dip2c
Ttc30a2
Ttc30a1
Copz1
Sema5b
Htr3a
Kcnn2
Kremen1
Pde4d
Kcnip1
Dipk1c
4930503B20Rik
Galnt9
Olfr1297
Knl1
Sepsecs
Pde7b
Fbxw7
Rspo4
Ivd
Rnase12
Rnase11
Matn2
Hoxb5
Hoxb4
Aff3
Saxo2
Efl1
Erg
Capn8
Dnajb8
Creb3l1
Gmnc
Gramd1b
AI429214
Lef1
Hmgxb4
Myt1l
Lrrc4c
Tnk2
Foxp1
Pakap
Hdac11
Alkbh5
Timm9
2700049A03Rik
Rgs13
Taf12
Gmeb1
Sohlh2
Slc44a3
Susd6
Arid1b
Nkx2-6
Mafa
Ccnq
Ywhaq
Hoxa1
Stox2
Celf4
Adtrp
Raet1d
Gls
Ttc32
Pax6
Ciao3
Dolpp1
Pcdh7
Pla2g2d
Bsx
Chrna5
Angpt2
Tle3
Npcd
Cbx6
Micu2
Rab3gap1
Map3k19
Apbb1
Stfa3
Gria1
Lmo3
Mrps33
Ptpn11
Tmem202
Hexa
Tmcc2
Znrf4
Vmn2r5
Ets2
Myt1
Ccl26
Olfm1
Scamp2
Nim1k
Crybg3
Cfap36
Dlc1
Elavl4
Etl4
Spaca7
Brox
Aida
Zfp423
Dpf2
Pcdh1
1810055G02Rik
Foxn3
Chn1
Olfr1532-ps1
Dio2
Tm9sf4
Tmem52b
Hesx1
Ngfr
Bcar3
Rapgef5
Zfhx4
Cipc
Prkab2
Crx
Ndst1
Dap
Enc1
Prkar2b
Smug1
Rab38
Ntn1
Slc2a12
Lrrtm4
Sp5
Enox1
Rasl11a
Rab28
Fbln1
Scn8a
Nxph3
Tmco5
Ppfia4
Atp6v1e2
Tmem147
Atp4a
Uncx
P2rx2
Lrcol1
Camsap2
Col6a4
Raph1
Pcnx
Npnt
Tnfaip8l1
Sall1
Tle4
Epn2
Slc25a25
Ormdl3
Lrrc3c
Ptpn12
Angpt1
Zfp385b
Gm14325
Nasp
Ush2a
Mrap
Uts2b
T2
Zdhhc16
Exosc1
Bcas1
Tbc1d14
Zfp663
Tnfrsf19
Arnt2
Mpp4
Apbb2
Tet3
Smarcal1
Ank3
Mrps28
Frat2
Cyrib
Arhgap35
AI661453
1700001C19Rik
Prmt3
Htatip2
Gpbp1
Rufy1
Arhgef33
Acbd5
Gja5
Slc10a4
Cma2
Ppp1r17
Dst
Cdh12
Rab27a
Pigbos1
Pigb
Dip2b
Gm21663
Olfr846
Fech
Trafd1
Tox
Cldn34d
Fbxo31
Tbpl1
Pgpep1l
Npepps
Gper1
Sulf1
Rps26
Hapln1
Epha4
Fabp2
Ext1
Vax1
Cilp
Myh3
Cbx5
Prrc2c
Cfap43
Arhgap42
Neil1
Commd4
Pcdh12
D7Ertd443e
Wdr17
Pard6b
Tmem178b
Kitl
Cd9
Th
Wfikkn1
Mettl26
Mcrip2
Kifc3
Lrmp
Bmp7
Tmem156
Pkdcc
Mpp7
Cerkl
Kctd9
Cdca2
Zfp566
Zfp260
Xrcc5
Hoxc11
Hoxc10
Gm21698
Gm21680
Zfp869
Rock2
Enpp1
a
Lhx5
Clasp2
Ebf3
Celf6
Arap1
Rnf26
Creb5
Zfp91
Lpxn
Alcam
Pik3c2g
Plekhm1
Tmem30c
Syt7
Pnliprp2
Chpt1
Megf11
Foxb1
Glis3
Samd4
Klf6
Atoh7
Tra2a
Acly
Efna5
Rab25
Ubqln4
Lamtor2
Ncald
Atxn7l1
Dynll2
Prdx3
Grk5
Gpm6b
Map4k2
Mtfr1l
Slc10a1
Peli3
Nrf1
Serpinb2
Txndc11
Lrrtm2
Afap1l1
Dennd4a
Iapp
Ubap1l
Fam110b
Pik3ap1
Clca1
Zfp217
Ubash3a
Muc15
Rnf220
Rnf125
Zar1
Bhmt
Gspt1
Gys2
Stk32a
Rell1
Tgfa
Rhbdd1
Rtn4r
Kif16b
Cadps2
Csrp3
Bin2
Arhgap36
Cpeb4
Mtus1
Mmrn1
Pttg1ip2
Ric8b
Megf9
Ccdc107
Kpna1
Itgb6
Bnc2
Sypl
Atp2c1
Pax2
Avl9
Slc35f3
Inpp4b
Luzp1
Cacng1
Vtcn1
Chrac1
Cfap54
Agtr2
Ripor2
Scn2a
Invs
Erp44
Nfatc4
Elavl2
Asxl3
Aldh8a1
Nkx3-2
Clnk
Atp5g2
Galr3
Zfp931
Pik3r1
Map3k7
Gmnn
Hmga1b
Hmga1
AI413582
Rcan3
Olfr1282
Olfr1281
Scgn
Dmrt3
Ebf2
Zfp960
Eipr1
Olfr319
Sh3glb2
Miga2
Bco1
Rassf9
Gga2
Ctnna3
Atp6v0a1
Tatdn2
Nufip1
Gpalpp1
Myl1
Zfpm1
C1ql2
Acadl
Prickle2
Map6
Csf2rb
Irx5
Sytl2
Dyrk3
Hnrnpl
Ech1
Nav2
Eya1
Smim8
Vnn1
Gm19410
Cotl1
Sh2d7
Tas2r119
Cyp11a1
Primpol
Casp3
Pon2
Nt5c3b
Klhl10
Ttll8
Lrrc30
Baalc
Cd2ap
Got1l1
Spry4
Pxk
Cln6
Ogdhl
Xrcc6
Desi1
Msx1
Gosr2
Sec23b
Gm4861
Grm4
Mamdc2
Rab8b
Slc16a7
Hspa8
C1qa
B4galnt3
Cxxc4
Gphb5
Clca3a1
Tjp2
Usp17lb
Usp17la
Ddx6
Shisa6
Gtf2a1
Trex1
Shisa5
Tceal1
Pms2
Ankrd61
Aimp2
Rapgef6
Tmbim7
Gatad1
Cep120
Ccr6
Ghrhr
Gm5165
Gm51425
Phc2
Kcnk3
Vkorc1l1
Zfhx2
Thtpa
Rnase4
Ang
Cul2
Rarb
Gse1
Tmem65
Myo10
Otol1
Elmo2
Metrn
Fbxl16
Gm14410
Raet1e
Raet1c
Raet1b
Tex46
Kdm1a
Adamts18
Isl1
Zbtb8a
Pik3r5
Rpl22l1
Tamm41
Hmcn1
Hnf1a
Mylk
Taar9
Taar8c
Runx1t1
Tspan12
Sulf2
Tshr
Dnaja4
Sh2b2
Cox7c
Sybu
Tnks2
Hsd3b4
Rtn1
Ranbp9
Gm4450
Tnip3
Zfp664
Ccdc92
Axin2
Zcchc24
Commd8
1700024G13Rik
Zbtb18
Tbr1
Cdca7
Slc15a5
Ppp6r3
Ppa1
Lsg1
Fam43a
Gm38396
Gm3752
Osbpl6
Igsf5
Psap
Dstn
Olfr121
Akap6
Tsga10
Add1
Bcor
1600014C23Rik
Gpr85
Skor1
Cyth3
Sv2a
Sf3b4
Iqschfp
Iqcj
Ptms
Lag3
Ccdc12
Nbeal2
Cul3
Hip1
Cdh6
Ptk2b
Mef2c
Dll1
Gm6710
Gm14391
Slc39a10
Nmnat3
Nck2
Oser1
Cacng4
Ppp3ca
Onecut1
Ank2
Timeless
Apon
Cacna1i
Trim2
Det1
Tsc22d1
Fzd7
Hadh
Lysmd4
P2ry12
Mrps9
Otx1
Ankar
Scn4a
Cnpy1
Vmn2r82
Gm3173
Meox1
Spcs3
Lnpk
Thap1
Manea
Tmem71
Capza2
Cep128
Zc3h3
Ctdsp2
Map7
Otoa
Rusf1
Tmem74
Iqsec1
Hecw2
Lpar6
Erich3
Lypd10
Kcnh8
Nr6a1
Zfyve26
Rad51b
Synpo
Col12a1
Lcmt1
Fgfr2
2510009E07Rik
Nfkbil1
Ddx39b
Atp6v1g2
Cibar2
Prtg
Mgat4a
Gm10406
Card19
Ttll4
Lrrc9
Cbfb
Fgf1
Mettl18
BC055324
Trio
Lcor
Nhsl1
Krtap19-9b
Tmem107
Trim24
Zfp703
Dusp6
Gnai1
Cep350
Epb41l3
Rcn1
Hexb
Rassf3
Dnaic2
6430548M08Rik
Neurog2
Tbx3
Eef1akmt1
Pxylp1
Irx4
Fyco1
Asb17
Syt2
Vmn2r102
Pcbp4
Abhd14b
Abhd14a
Tspan31
Marchf9
Cdk4
Hopx
Asf1b
Sdk2
Six1
Edil3
Ccnd2
Mgam
Gpr22
Irf2bpl
Myo1b
Arid1a
Mrpl45
Upf3a
Atg5
Unc5c
Ankrd36
Rbm18
Mrrf
Cemip2
Iglon5
Golph3
Slc35c2
Nkx3-1
Smpx
Zbtb12
Ehmt2
Mageh1
Tyro3
Trpm1
Smco4
Usp15
Rnase9
Atxn1
Fgd4
Rxrg
Tcf15
Rims2
Mtss1
Smad5
Gm2956
Pak2
Epha7
Scml4
Kifc1
Folr2
Fam3c
Gpr139
Gm3383
Tmem30a
Cnmd
Npy6r
Chmp1b
Actn4
Kcnk2
Gnat3
Mrpl36
Stom
Ptpro
Lyrm9
Gpr132
Gtf2f2
Wee2
Dennd11
Vmn2r4
Tdg
1190007I07Rik
Zfp827
Zfp473
Vrk3
Vmn2r72
Sostdc1
Abhd6
Srek1ip1
Cwc27
Pop5
C2cd5
Snw1
Zc2hc1c
Acyp1
2610042L04Rik
Pum2
Fras1
Ankrd1
Dzip1l
2310079G19Rik
Glrx2
Gab1
Arl4d
Meis2
Nefl
Ankrd50
Gpa33
Jmjd1c
Spred1
Ubiad1
Mtor
Tent5a
Polr2m
Rffl
Bag2
Sema3d
Dusp16
Pcbd2
Pbld2
Hnrnph3
Oxsm
Ngly1
Ipo8
Olfr93
Rbm27
Chrna4
Sycp2l
Sppl2c
Med25
Fuz
Bambi
Zbtb2
Rag1
Nbdy
4930524B15Rik
Olfr60
Olfr527
Ptprn2
Thbs1
Tapt1
Ttc34
Elp5
Cldn7
Chil1
Prr15
Marco
Fezf1
Arid2
Ermn
Tlr11
Olfr735
Cntn1
Spx
Slc5a3
Mrps6
Txndc2
Schip1
Gulp1
Wdcp
Pitpnm1
Cdk2ap2
Ntf3
Tmem171
Acvr2a
Plch1
Cdc14b
Frem2
Msi1
Gm21119
4930467E23Rik
Ptgdr
Mrps23
Baz2b
Smarce1
Nnt
Foxd3
Nacc2
Med16
Ppp3r1
Sacs
P4ha2
Wdr59
Yipf7
Guf1
Ptprm
Il5ra
Traf3ip3
Gm15319
Phactr2
Morf4l1b
Rab1a
Tbc1d9
Nrde2
Apobec2
Prickle1
Tspo2
Cdc42ep3
Drd2
Mphosph10
Mcee
Esrrg
Gnb1
Nol4
Kcnh2
Zc3h4
Trp53inp2
Elovl5
Cast
Dock11
Cd300lg
Wdr35
Nyap2
Rbm47
Cntn3
Krt26
Aen
Zfp715
Prpf40a
Arl6ip6