ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706958 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◣ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Tcstv3
Gm815
Kank1
Txndc11
Asic1
Snx18
Brox
Aida
Frzb
Greb1
Cldn34d
Nfe2
Ubxn10
Pla2g2c
Kpna1
Uts2r
Tex19.1
Nkx2-6
Nhsl1
1700024G13Rik
Alox5ap
Mnx1
Gmnc
Hexb
Cars
Nrp1
Zfp879
Grm6
Mcf2
Lmo4
Frmd4a
Il31ra
Coro2b
Sipa1l1
E030030I06Rik
Gm4791
Bin2
Oga
Cmc2
Megf11
Krt8
Pgk1
Zfp608
Kcng3
Olfr806
Aqp6
Nrf1
Maml1
Dcaf4
Rab38
Atg4c
Abhd6
Pax3
Hoxc11
Hoxc10
1700017B05Rik
Fbxw4
Sspn
Npcd
Cbx6
Cd209a
Tnk2
Coro2a
Med27
Sostdc1
Zfp516
Epha4
Akap17b
Zfp362
Lhx4
Edar
Pakap
Sytl2
Ccna1
Rnase12
Rnase11
Tagln3
Lrmp
Lsg1
Fam43a
Lmo3
Col6a6
Cd93
Neurod1
Aldh9a1
Tspan15
Cox8c
Irgm2
Myt1l
Scamp2
Cerk
Bcar3
Nptx2
Smarcal1
Hesx1
Eml1
Capn8
Oasl1
Enpp1
1600014C23Rik
Stox2
Glrx2
Dnah7b
Zgrf1
Larp7
Sepsecs
Ntn1
Slc17a8
Trex1
Shisa5
Asmt
Tbc1d14
Senp6
Spp2
Mid2
Tnfrsf19
Numa1
Akap6
Gper1
Lce3a
Gm10710
Dchs2
Arnt2
Pmfbp1
Kctd3
Trim2
Znrf4
Trpm3
Arhgap33
Rnf125
Rasl11a
Nav2
Cdc14b
Gja5
Slc44a3
Lrrtm4
Pxn
Copz1
Csf2ra
Chga
Zkscan1
Mpp4
Pax6
Plekha7
Tmem125
Atp2b2
Ndufaf4
Sema5b
Npepps
Slc25a40
Dbf4
Sfi1
Eif4enif1
Rsph3b
Tmeff1
Tmco5
Fzd7
Ric3
Pgpep1l
Kremen1
Ptpn11
Sash1
Alkbh5
Nt5c2
Ina
Fndc3b
Lrrc4c
Olfr1274
Taf1d
4931406C07Rik
Lmo1
Tiam2
Cfap36
Psmc6
Ero1a
Gm51425
Foxb1
Nasp
Nsmaf
Filip1
Hsd3b4
Gm10681
Cldn3
Peli3
Olfr93
Btla
Mlph
Kdm2b
Podn
Prkab1
Kif2c
Tm9sf4
Ypel1
1810055G02Rik
Afap1l1
Chd7
Slc7a7
Zfp407
Cdh12
Timm8a1
Phc1
Ror1
Atoh7
St3gal1
Riok3
Slc6a5
Ndst1
Grm4
Foxn3
Prdx3
Grk5
Bcas2
Bmt2
Pkdcc
Gm5820
Ywhaq
Ghrhr
Gm4450
Olfr60
Olfr527
Fezf2
Olfr492
Cdk19
AI661453
1700001C19Rik
Dock10
Pdlim1
Dolpp1
Cxxc4
Mef2c
Eya1
Ptk2b
Gm21663
Tgfa
Dap
Atg7
Gdf5
Cep250
Hmga1b
Hmga1
AI413582
Gm5165
Ednrb
Slc9a9
Ptpn12
Zfp3
Stx18
Hopx
Sctr
Cfap221
Rgs8
Uts2b
Spred1
Dtwd2
Chrna5
Timm9
2700049A03Rik
Coa4
Tspan12
Laptm4b
Nfatc4
Gas2
Fancf
Arxes2
Palmd
Bsx
Trub1
Hoxa1
Bambi
Cbx5
Ptprz1
Cybb
Cyp2j12
Hacd4
Qrfpr
Rab27a
Pigbos1
Pigb
Abca4
Taf12
Gmeb1
Pdlim3
Zfp97
Fgd4
Zfp960
Myef2
Csrp3
Pard6b
Asf1b
Fam171b
Gm29797
Cenpn
Lrrc52
Kdm4c
Sgk1
Cyrib
Armcx1
Esrrb
Sema6d
Nnt
Usp25
Sgms1
Ascl1
Plekhh3
Cntnap1
Ccr10
Gnat2
Gm12500
Ampd2
Ngfr
4921524J17Rik
Snca
1700003F12Rik
Morc1
Daam1
Gsc
Grpel1
Htr3a
Hoxb5
Hoxb4
Olfr1286
Ets2
Tmem30c
Lsm14a
Olfr1113
Kcnn2
Enc1
Neil1
Commd4
Ablim1
Gnas
Ttc32
Zcrb1
Pphln1
Pcdh1
Rbm27
Pmp22
Rbm47
Ip6k3
Kat2a
Hspb9
Vmn1r75
Zfp423
Lef1
Tmem65
Cul3
Mpp7
Olfr1047
Olfr1046
Wee2
Dennd11
Olfr1513
Angpt2
AI429214
Matn2
Knl1
Astl
Gm21698
Gm21680
Galnt9
Cdh23
Tshz2
Gab1
Dipk1c
Olfr1297
Cma2
Rgs13
Ccpg1os
Ccpg1
Sulf2
4930503B20Rik
Ddx19b
Aars
Raet1d
Ms4a12
Ccr6
Ifnb1
Dnajb8
Ciao3
Dpf2
P2ry12
Susd6
Lrrn2
Glis3
Vmn2r2
Chmp1b
Apbb2
Chst7
L3hypdh
Jkamp
Zbtb8a
Pcdh12
Olfm1
Gpr139
Angpt1
Acbd5
Lix1
Hmgxb4
Ugt3a2
Lpar6
Zfp703
Ttll3
Kifc3
Onecut2
Creb3l1
Ppia
Atp6v0a1
Tjp2
Sp5
Setd4
Cbr1
Ccdc107
A330070K13Rik
Etl4
Morf4l1b
Mtss1
T2
Arhgef33
Olfml1
Fabp2
Extl3
Chn1
Rtn1
Ctrb1
Cadps2
Arid1b
Zfp385b
Wnt16
Enox1
Uncx
Nfasc
Rab3gap1
Map3k19
Ntn4
Zfhx2
Thtpa
Dio2
Ranbp9
Tshr
Crybg3
Irf2bpl
Prrc2c
Prkar2b
Dusp23
Zfp982
Pknox1
Mia3
Unc5c
Rassf9
Gm14325
Ets1
Dmrt3
Arhgap35
Xylt2
Hadh
Gga2
Ctbp2
C1qa
Aadacl2fm1
Foxp1
Arhgap36
Celf4
Oser1
Fgf1
Ifnl3
Ifnl2
Shroom4
Vax1
Hdac11
Aen
Pnliprp2
Ebf2
Dlc1
Mrps9
Rcan3
Atoh1
Spaca7
Mup4
Rab28
Gm4861
Syt2
Fam214a
Emb
Kcnip1
Ndufb4
Trp53bp1
Raph1
Npnt
Gm14410
Phc2
Cilp
Zbtb18
Cfap54
Slc12a6
Dennd4a
Sms
Celf6
Zdhhc21
Slc44a5
Olfr107
Olfr1282
Olfr1281
Rhbdd1
Rab25
Acadl
Ubiad1
Mtor
Smchd1
Nol4
Ubqln4
Lamtor2
Gabrg2
Foxd3
Foxp4
Tm4sf4
Scn8a
Slc14a2
Avl9
Tle4
Sytl3
Zeb2
Tet3
Ext1
Galr3
Kcnh8
Pik3r5
Adora3
Dll1
Atp5g2
Ankrd36
Nr6a1
Serac1
Gtf2h5
Raet1e
Raet1c
Raet1b
Zfp715
Tmem178b
Olfr846
Eef1akmt1
Myo1b
Adk
Mylk
Ldlr
Acly
Slc10a1
Slc10a4
Gm7244
Abi2
Lats2
Aff3
Nfkbil1
Ddx39b
Atp6v1g2
Pla2g2d
Sympk
Thrb
Mamdc2
Tle3
Tmem147
Atp4a
Wdcp
Nutm1
Nop10
Ebf3
Pde7b
Krtap19-9b
Nxph3
Prkab2
Stom
Tmcc2
Sh3glb2
Miga2
Strip1
Capza2
Bhlhe22
Syt7
Slc4a4
Pm20d1
Bcas1
Gpm6b
F2rl1
Taar9
Taar8c
Rspo4
Pik3cd
Smco4
Slco1a4
Bmp7
Gmpr
Xrcc6
Desi1
Zfhx4
Pxylp1
Dip2c
Arhgap32
Onecut3
Kctd9
Cdca2
Zfp217
Slc25a35
Rangrf
Pik3c2g
Ppfia2
Tbx20
Tbc1d23
Cipc
Ankrd50
Arap1
Plekha1
Gjd2
Rnase4
Ang
Zdhhc16
Exosc1
Tnip3
Mafa
D7Ertd443e
Lima1
Got1l1
Ddc
Crx
Elavl4
Sulf1
Epn2
Eipr1
Id3
Tbpl1
Ust
Zfp931
Lama2
Itgb6
Myh3
Ackr1
Sox5
Pik3r1
Taar7a
Rnf220
Dct
Dmrta1
Saxo2
Efl1
Zcchc24
Arhgef18
Ssu72
Tnks2
Gys2
Map3k7
Plekhm1
Rtn4r
Gm8165
Zfp663
Atp8a1
Kdm3b
Fbxo31
Cnpy1
Spry4
Ctss
Marchf7
Psap
Spx
Rpl22l1
Fgfr2
Abracl
Taar7b
Pcdh7
Vnn1
Apbb1
Tamm41
Mib1
Mest
Bdnf
Efna5
Sall4
Dnaja4
Srp54c
Srp54b
Ptprn2
a
Hapln1
Ppp1r17
Ahcyl2
Tnfaip8l1
Kif16b
Vmn2r82
Tatdn2
Adtrp
Gm15319
Myo10
Fzd5
Mrap
Mical2
Gata6
Eno4
Adar
Myt1
Sem1
Cacng1
Zfp869
Srek1ip1
Cwc27
Fech
Slc22a15
Rce1
Rufy1
Ncald
Bnc2
Rfc4
Cyth3
Rps26
Csf2rb
Rpn2
Mroh8
Dusp6
P2rx2
Lrcol1
Zfp566
Zfp260
Frem2
Cyyr1
Zfp808
Chrna4
Sec24b
Rps19
Lypd4
Dmrtc2
Nufip1
Gpalpp1
Gria1
Cdh20
Cd59a
Anln
Gm6710
Gm14391
Prkaa1
Pon2
Cdh24
Parvg
Msx1
Kcnh2
H4bc24
H2bc23
H2ac24
H2ac23
Tmem52b
Slc25a25
Dlgap1
Klf6
Tmem229b
Rere
Mrps25
2510009E07Rik
Stfa3
Spty2d1
Cfap58
Cep128
Rufy3
Ppp3ca
Sv2a
Sf3b4
Msi1
Stk32a
Fbxw7
Baz2b
Akr1b3
Rbm18
Mrrf
Ubash3a
Ric8b
Grin3a
Nfe2l3
Inpp5k
Sypl
Vmn2r102
Tbr1
H4c17
Onecut1
Aqr
Ankdd1a
Tcaf1
Stk33
Esr1
Arid4a
Serpinb2
Zfp707
Col11a1
Tmem107
Nup93
Gpa33
Gphb5
Fbln1
Wdr20rt
Scml4
Ank3
Rxrg
Abtb2
Prmt3
Htatip2
Tcf7l1
Atp8b4
Nim1k
Ifna13
Prpf40a
Arl6ip6
Clcc1
Scgn
Gm21119
Mro
Cdca7
Otol1
H4c18
Camsap2
Tent5a
Slc9c1
Lig3
Olfr225
Zfp91
Lpxn
Usp44
Mrps33
Mical3
Kcnj16
Aldh2
Zfp978
Skap1
Slc39a10
Erg
Tmem178
Tcf15
Rab8b
Baz1a
Tex46
Kdm1a
Zfp991
Slc35f3
Mobp
Cul2
Tsga10
Cacna1c
Hacd3
Olfr108
Ghrh
Ttc30a2
Ttc30a1
Arid3b
Aff1
Ddx58
Ptpro
Mad1l1
Cpeb4
Pop5
Optn
Mfng
Nt5e
Whrn
Ccl26
Dclk2
Ccnq
Aldh8a1
Gramd1b
Prdm1
Uqcc3
Ubxn1
Lbhd1
1810009A15Rik
Gm19410
Gm38396
Phactr3
Ogn
Gm14326
Chmp6
Npffr2
Lingo3
Gria3
Zfp945
Mtf1
Rab1a
Arl4d
Slc13a1
Nacc2
Slc17a6
2210418O10Rik
Arhgap28
Pcbd2
Lama1
Irx5
Cdkl5
Arhgef2
Secisbp2l
Map4k2
C2cd5
Cfap43
Tex19.2
Cibar2
Edem1
Fbxo32
Cotl1
Med16
Gm17026
Fam13b
Lipm
Toporsl
Actn4
Vmn2r5
Prtg
Dip2b
Klhl29
Piwil1
Zfp365
Lcat
Ilvbl
Gm10471
5031410I06Rik
Arid1a
Vmn2r24
Pbx3
Lrriq1
Tmem35b
Ank2
Snx11
Cbx1
Trafd1
Zfp90
Smim8
Gosr2
Scrt2
Rorb
Insyn2b
Zfyve26
Rad51b
Msra
Cyth1
Nrep
Cemip2
Lrig3
Gspt1
Otx1
Gnai1
Inip
Mbtps2
Mtus2
Rln3
Il27ra
Usp15
Tenm2
Kitl
Nr4a2
Dst
Tor3a
Sh2d4a
Rabepk
Elk4
Rassf3
Hspa8
Mpzl1
Olfr959
Muc15
Mrvi1
4930467E23Rik
Olfr62
Kcnip3
Lhx5
Erbb4
Slc5a3
Mrps6
Iqschfp
Iqcj
Zbtb12
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Ubr5
Zc3h3
Ndufaf3
Impdh2
Dalrd3
Smug1
Homer2
Plaat5
Lgals12
Ppp3r1
Stx12
Dnaic2
Snw1
Rarb
Ivd
Mgam
Fbxo17
Mbnl3
Tti2
Foxa2
Elavl2
Fgf15
Pitpnm1
Cdk2ap2
Mrpl22
Gemin5