ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728789 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◣ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

NGB
C1orf198
MTRNR2L1
DUX4
FRG2
MTRNR2L8
CYP4F11
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
USP17L8
OR2T1
DBF4B
ZBTB40
CDK12
EPN1
SCNM1
LYSMD1
TMEM79
SMG5
ZNF684
C22orf34
ZMPSTE24
EXO5
MRPS14
ATF6
CAP1
TFPT
PRPF31
STX16
MTBP
MRPL13
ZBTB45
DMAP1
MRPL21
IGHMBP2
UBE3B
SUPT7L
SLC4A1AP
DPY19L4
MRPL44
USP30
ITGB3BP
EFCAB7
NME1-NME2
NME1
INTS12
GSTCD
NDUFS7
FAM207A
MED23
VPS13B
RPS7
IPO4
SF3A3
WDR24
TOP3B
NDUFB3
FAM126B
GOLGA3
DUS1L
WDR97
MAF1
AAR2
DCP1A
PEX3
ADAT2
CCAR2
C8orf58
CDK5RAP1
REXO4
ADAMTS13
SNAP47
JMJD4
NDUFS3
KBTBD4
BRF2
TRIP4
GTF3C3
TMEM41A
PDE6D
COPS7B
SUGCT
MPLKIP
WDR83OS
WDR83
MAN2B1
RFXANK
BORCS8
GALK2
COPS2
SMG8
ZNF408
ARHGAP1
ISY1-RAB43
ISY1
BMS1
FRA10AC1
STX18
ALKBH3
ZNF296
GEMIN7
MRPL40
HIRA
PRRG2
NOSIP
PIH1D2
NKAPD1
DCAF10
AP3S2
TACO1
MRPS31
EIF1AD
BANF1
B4GALT7
USPL1
HMGB1
VPS52
RPS18
MLEC
STMN3
RTEL1
NUF2
RBBP5
RAD54L2
TMEM242
WDR36
TBC1D19
TTC4
NSA2
GFM2
SEC22B
TMEM222
SLC33A1
MITD1
SLC24A1
INTS14
MAN2C1
ZER1
CCDC97
NSFL1C
ZNF165
UTP3
DRG2
COMMD2
DSTYK
TATDN3
NSL1
SF3B6
FAM228B
NR1H2
RTTN
TOR1AIP2
TOR1AIP1
MBTPS2
ZNF391
GTF2H2C
NOL8
CENPP
SEC13
EIF3F
MRPL3
TEFM
ZDHHC6
VTI1A
VPS25
TUT1
ZNF791
ZNF490
LSG1
SSBP1
SLC35A3
AURKAIP1
GTF2H2C_2
FAM227B
DTWD1
NOL12
C17orf75
MKRN2OS
MKRN2
METTL9
RPL37
TNPO3
YIPF2
TIMM29
MRPS18C
HELQ
PSMF1
KLHL20
GTF3C5
FAM98B
TRUB2
COQ4
SLC39A3
TMEM101
SLC44A1
BBS1
PPIP5K2
GIN1
NOXA1
ZNF770
GTF2H2
MNAT1
ALG10B
MRPL1
NMNAT1
LZIC
ACSF3
CPPED1
MTMR9
SLC39A13
WBP1
INO80B
SMG7
WDR11
CCDC57
RUVBL1
EEFSEC
NR1H3
ACP2
EDC4
TMA16
COX16
C11orf49
SELENOH
NOP16
HIGD2A
AQR
SCAND1
YJU2
MRPL16
VPS9D1
SNRPD3
GUCD1
FEM1B
UBA5
ACAD11
GTPBP3
ANO8
PLEKHM3
RNF6
SAR1B
C12orf73
POLR3B
MRPL48
STOML2
TSPAN10
NPLOC4
DDX1
TVP23B
RRP15
NDUFAF1
OTUD7B
KCTD5
HNRNPA1L2
PCID2
CUL4A
PSMG3
NDUFC2-KCTD14
NDUFC2
NUP54
HEMK1
C3orf18
INTS5
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZSCAN22
NKAP
TIGD1
EIF4E2
JRK
EIF2D
HUS1
ANAPC5
PEMT
RPL29
PHB2
PSD
FBXL15
TTC26
C18orf21
MTOR
RBM28
MRPL58
TSEN15
CSTF2T
METTL15
KIF18A
SLC39A4
CPSF1
STPG3
NELFB
SENP1
PFKM
CHCHD2
NME3
MRPS34
EME2
TRMU
DNAJC25-GNG10
DNAJC25
NUP107
EXD2
PDCD6
PUS10
PEX13
DHX33
MTIF2
ALG10
PIGL
NCOR1
LTN1
ZNF581
ZNF580
CCDC106
FBXO22
VPS45
C10orf88
ZNF623
GMEB2
CGGBP1
C3orf38
YBEY
MCM3AP
RAB18
AGK
THEM4
PPIL3
NIF3L1
MEIG1
SEC11A
TMEM69
GPBP1L1
NXT2
CCNC
NUDCD3
SLC25A53
BLOC1S6
TBC1D13
STARD3
ERI1
GTF2H4
B3GALT4
MPHOSPH10
MCEE
LMAN2
PTPN21
HDAC8
CFAP298-TCP10L
CFAP298
SNRPB
KRR1
ANKRD40
GRPEL2
TRDMT1
LAS1L
MRPL39
TEX38
ATPAF1
ZNF205
THAP10
LRRC49
SEC16B
COQ3
WDR74
PHKA2
MKRN3
CYREN
PPIL1
C6orf89
TIMM9
KIAA0586
TMEM68
TGS1
WDR25
WARS1
ZBTB11
MCAT
TXN2
ZKSCAN8
GPAA1
EXOSC4
ANTKMT
PDCD6IP
MAMDC2
COA6
PCYT1A
TEDC1
CRIP1
SPAG8
HINT2
DNAJC24
DCDC1
NFKBIL1
ATP6V1G2
RAG2
IFTAP
ZNF668
ZNF646
BCAT2
PRSS27
PSMC2
DNAJC2
MED18
COPS4
FBXW8
CCDC200
TIGD6
HMGXB3
DDT
SNRNP200
ZC3HC1
ZNF579
RPS4Y1
ADPRHL1
ZNF561
POLDIP3
PDCD2
KIF22
CLK3
OPA1
UQCC1
DDTL
TYW1B
TEX9
RFX7
TUBGCP3
GABPA
ATP5PF
ACBD6
MRPS22
MTRF1
AGO3
LSM5
TMEM107
FAM118A
SREK1IP1
CWC27
MTR
C8orf33
BANP
TSSC4
ARL6IP4
RPS20
MFAP3
FAM114A2
NUDT5
CDC123
NSUN4
CARD8
AVL9
MST1
UFC1
TXNDC9
EIF5B
DPP9
MTMR4
ZNF596
COL23A1
LIG4
ABHD13
EMC4
SRP19
ZNF564
VWA8
IPPK
TYW1
SBDS
TDP2
SDHAF3
ACOT13
GFM1
ZNF461
SLC25A21
ERCC6L2
RFC4
ZNF622
ZNF558
ZNF570
ZNF569
FBXW11
ZNF195
ZNF846
PPID
NEU3
TMEM128
NAA20
YIPF3
POLR1C
ZSCAN9
PTPN6
C12orf57
PIGQ
NHLRC4
PPP1R11
SH2B1
MTHFD2L
NUP153
PTPRM
TMEM199
POLDIP2
CDC16
OGFOD2
TUFM
FAM168A
USE1
DPH7
UNC50
COA5
DNAJB12
C16orf46
ATG5
ECHDC1
MRPL53
KNSTRN
ZNF549
PRKAB1
ZNF410
RSPH3
CCDC152
MTG1
SMIM19
SLC20A2
FKBP3
FANCM
EXOSC3
SIRT4
VIM
UBIAD1
NVL
CSTF2
NDUFA12
OPRL1
LSM10
TTC14
MARK3
C4orf3
SDR39U1
CNPY3
STMP1
WDPCP
MDH1
MAGEF1
CLOCK
PRORP
PPP2R3C
METTL6
EAF1
MAP2K5
DPAGT1
C2CD2L
ZKSCAN4
SRSF7
MVB12A
ZNF302
LRRC58
VIPAS39
AHSA1
PSME3
NFIB
LRRC8A
KYAT1
PER1
EIF3D
HSP90AB1
TAF12
VPS26C
C19orf67
SUGT1
PUM3
SPAAR
NDRG1
SCRIB
PNPO
NIPBL
FRG2C
PSMD6
CRYAA
CRYAA2
RSL24D1
STK3
FBXW2
INVS
ERP44
SPCS1
GLT8D1
H4C11
SMIM26
FIP1L1
ZBTB4
SLC35G6
POLR2A
SPATC1L
TPD52L2
NCBP2AS2
NCBP2
ABHD16B
SPATA5L1
H4C15
H4C14
GATM
GTPBP6
MPDU1
LOC100996842
CD68
EIF3H
TMEM30A
KLHL9
PRPF18
PYURF
PIGY
HERC3
SNRPD1
CACNG8
PRPF3
C8orf76
EMILIN2
ALDH3A2
DDX18
OSGIN1
MTRNR2L9
TM9SF3
ABRAXAS1
ETV5
SLF1
KIAA0825
SLC35C2
SIT1
ZNF562
ASMT
SRBD1
TOMM22
DISP1
ZDHHC21
TPRKB
GOSR2
RARS1
MANBAL
GPR137
NCAPD2
MRPL51
CBLL1
PIGC
PSMD11
POC5
EFHC1
RPS27
RAB13
NOP2
SLC30A6
MTAP
WDR4
JOSD2
ASPDH
OSGEPL1
DDX21
SPATA6L
PLPP6
GORASP2
CHIC2
BBS10
CCNL1
ARL6IP1
CLTA
LKAAEAR1
TANK
PRADC1
CCT7
EFR3A
SLC50A1
DPM3
PLEC
ZSCAN12
POLR1B
FOS
DDX19A
APEH
ETV4
APMAP
TTC23L
SARAF
LINGO1
HP1BP3
CCDC14
CCN2
TRAPPC10
YY1
RCC1
ZC3H10
RPL41
H2BC21
H2AC21
H2AC20
GOLPH3
ZNF101
TMEM249
SLC52A2
FBXL6
DCUN1D5
ZNF35
TTI2
ELAVL1
TSSK6
NDUFA13
EIF4A3
CCDC22
CACNA1F
ARMC1
TSPOAP1
MRPL54
APBA3
KRTAP29-1
KRTAP16-1
RHOT2
RPS6
H3C13
H2BC18
PABPC4
APTX
VPS53
GEMIN2
EIF4G2
PRDX1
DPP8
RREB1
DTD1
RXYLT1
PGAM5
MBNL1
ELMOD2
DIS3L2
LYPLA2
FUBP3
AZIN1
PSMA5
VPS36
LCMT2
CKAP2
ADAL
IPO7
SYNGAP1
FAM187A
EFTUD2
CUTA
CCDC103
WDR55
TTLL12
LCORL
EBNA1BP2
CFAP57
UTP23
H4C12
NAA50
GLO1
ATP6V1A
SNX16
PCIF1
ENPP4
CLIC5
ZCCHC7
DIAPH1
SPG11
PARP11
YRDC
PARP10
C1orf122
SRSF2
MFSD11
JPT1
TUT7
GLI4
DHPS
DBNL
RNF224
RNF208
CYSRT1
ZSCAN25
PARP2
CSKMT
C11orf98
ARID4A
HSPBP1
EIF4A1
CALM1
BRSK1
DPM2
PPAN-P2RY11
PPAN
INTS2
ANGPTL6
SLC3A2
SLC25A32
DCAF13
AP2B1
ZNF3
NFKBIZ
TTPAL
STYXL1
SCO1
ADPRM
NEK9
CTR9
RAD23A
POC1B-GALNT4
KIAA0100
GALNT4
H2AC16
H1-5
LRRC24
C8orf82
POLR2M
GBA
ERVH48-1
CAAP1
AP5Z1
S100A10
TRIM4
TERF2
EBAG9
GTF2H3
EIF2B1
STAU1
MCL1
DDX27
SMC4
IFT80
FIBP
CCDC85B
RMDN2
TBX15
H1-2
YKT6
TOMM5
ZNF669
TRAM2
SDAD1
MRPL24
KAT6A
RGL2
PGGT1B
RPLP1
MFSD14A
PLRG1
ID1
EIF2B5
LMNA
TFRC
KRBA2
RFC2
CNBP
VMP1
PTRH2
L3HYPDH
KDM5A
JKAMP
CCDC77
WDR43
TIMMDC1
STK36
SNAPC3
RNF25
UGGT2
MELK
ARHGAP29
ZFP62
SSNA1
PROSER1
NHLRC3
CALM2
ANAPC2
PGAP3
ERBB2
CCDC38
AMDHD1
PNP
NKIRAS2
DNAJC7
ADAM17
U2AF2
CCNT1
UBE2M
THUMPD3
CHMP2A
MAPK8IP3
ACBD5
SELENOK
TMEM230
PPIA
MOCS3
DPM1
OSGEP
HERPUD1
APEX1
DPY19L3
CAST
DHX8
SYTL2
RPL37A
MAT2A
AMOTL2
LAMTOR5
H2BC11
H2AC11
H4C2
H3C2
H2AC4
GMFB
MSANTD2
MRM1
MAK16
MOB4
ATAD2
PABPC1
GNAI3
GADD45B
C20orf144
ACTL10
ZSWIM6
ZBED9
SETD6
PNN
FARSA
CALR
ADAR
IGBP1
DUSP6
SERPINI1
PDCD10
BCL3
ZNF697
TAF13
SYCE2
MRPL27
MED30
H2BC12
H2AC12
EME1
C15orf61
ZNF530
H3C15
H3C14
H2AC19
H2AC18
TRPS1
TUBB3
SLC7A5
PAK2
MC1R
LRRFIP2
FSCN2
DUSP1
ZNF682
USF1
TAF1B
MINPP1
ITGB1BP1
HEATR6
CPSF3
TBRG4
RHOB
RSRP1
SLC35E1
NEPRO
PNKP
MTRNR2L10
BCDIN3D
RPL6
OXNAD1
NPAS4
DPH3
AP4E1
P4HB
LINGO2
HIF1AN
FANCD2
ZNF784
ZNF696
UAP1
HIPK1
FBXW9
ARHGEF7
APPL2
TMEM129
TACC3
LIME1
INTS9
HMBOX1
TBL3
RNF151
FAM149B1
ECD
HSPA5
LAMTOR1
ZNF12
RNPS1
ASPH
ANP32E