ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323403 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX323401: MCF-7

◢ SRX323402: MCF-7

◣ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
CNOT3
DUX4
ADNP
SLC2A10
COL23A1
TRIM3
TIMM10B
ARFIP2
MTRNR2L8
FRG2
POLR3B
REXO4
ADAMTS13
PLCB4
RTEL1
STMN3
PSRC1
PSMD6
RTBDN
MAST1
ZNF609
MTRNR2L2
MSH3
DHFR
STARD10
KIF5C
MOB4
CYRIB
LMNB2
FLYWCH2
C9orf152
STX16
CCDC59
EXOC2
SLC23A1
PROB1
MZB1
CUEDC1
NOL11
MRPL44
ERGIC1
RGS19
OPRL1
LKAAEAR1
GNPNAT1
IER3
FLOT1
TRIM37
MADD
PTPRN2
NOTCH2
SKA2
PRR11
DRD4
BCL3
NACA2
MTRNR2L1
TET3
TLNRD1
ARL14EP
GTPBP6
BRIP1
IL2RA
MAMDC2
INKA2
DDX20
NOTCH2NLC
BMP7
RGPD2
RGPD1
ZNF217
MED23
ENPP3
HIPK1
TUBD1
RPS6KB1
KMT2A
SULF2
PMVK
DPY19L4
MVD
FRG2C
PCCA
SPRYD3
NCOA3
SCAMP1
SECISBP2
CKS2
AP3S2
RBSN
EIF2S1
ATP6V1D
APPBP2
NDUFS3
KBTBD4
FAM180B
TANC2
ZNF165
OR1F12
GABPB1
SEC22B
ATP5MC2
EIF4B
OTUD7B
CLTC
CSDE1
FAM221A
SNAP29
PI4KA
PARD6B
C3orf14
MMADHC
TEX14
RAD51C
DCLRE1B
AP4B1
RNF6
S100A16
S100A14
MARCHF7
BAZ2A
PPM1D
BLOC1S5
USP32
FAM227B
DTWD1
BCAS4
B4GALNT3
BCAS3
ECT2
KANSL3
FER1L5
ART1
REPS1
SMIM14
MUC3A
RAB1B
TMEM121
VPS13B
ATAD2
PHRF1
NOTCH2NLB
UCHL5
RO60
PFDN4
TBX4
RPS7
SIKE1
MRPL21
IGHMBP2
DMXL2
TRIM33
PPM1E
PGK1
ZDHHC1
VMP1
PTRH2
EEF2K
ZNF655
FAM200A
TRIB3
ARHGAP40
AFF4
CST3
KMT2C
TDRD10
SHE
CST4
PCYT1A
DEDD
CST2
KMT5A
SYT5
DNAAF3
DMTF1
MYADM
FAM228A
REXO5
ERI2
ZNF500
ZBED8
SLC16A5
TMEM87B
DNAJC10
ZFP36
PLEKHG2
ADPRHL1
PALM3
MISP3
ALG8
GGPS1
ARID4B
SP1
P2RY6
CST1
FFAR2
RPL32
ZNF408
ARHGAP1
WDR11
DPF1
CYREN
CRNKL1
CFAP61
EIF1AD
CST6
BANF1
SCYL3
GALP
MICA
POLR3F
DZANK1
SNRPB
RAPGEF6
AP3B1
RPS26
SLC25A40
DBF4
LAMTOR1
ANAPC15
SPTBN4
BLVRB
PPL
SNX1
CIAO2A
NARF
CYBC1
PHC2
GORAB
NKX2-8
SGO2
FLYWCH1
PAQR4
KREMEN2
SLIT3
ODC1
MTOR
RDH5
CD63
C6orf89
KRT18
TNS4
ZFP37
ETV2
COX6B1
SLC1A5
CALCA
EMSY
LOC102724770
DGCR6
TACO1
CCDC97
DGKA
UBE2K
NAPSA
MUC5B
ITGB5
BCL2L13
ATP6V1E1
RMND1
ARMT1
TOP3A
SMCR8
ZMAT2
HARS2
HARS1
WDR55
SLC51B
DND1
TRIM59
ZNF106
SNAP23
CCDC102A
ASNSD1
ASDURF
ZNF576
IRGQ
TEP1
RPEL1
RAC3
LRRC45
DCXR
CENPX
CIAO3
TTC39A
CCPG1
C15orf65
SDHA
CCDC127
UTP25
TPCN1
AP2S1
GLYATL1
LRP6
EIF4A2
C3orf35
SLC10A5
IMPA1
RPS6KB2
PTPRCAP
MDFI
SCIMP
ING4
PRORP
PPP2R3C
ESM1
RUVBL1
CEP63
ANAPC13
ANKRD60
MAPKAP1
NQO1
TTC9B
PMEPA1
FAM72C
CCNP
IPPK
UEVLD
SERPINH1
B3GNT2
MUC2
SMG8
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
CXXC5
PSMD14
FASN
CELF2
UBAP1
CTDSP2
N4BP3
RABEPK
CAV3
ZNF335
ZHX3
TEN1
MPEG1
ACOX1
SLC7A8
KRT86
CLDN23
TMEM183A
PPIP5K1
CKMT1B
RIPOR3
SRGAP2B
FAM72D
TMEM199
SEBOX
POLDIP2
ARHGAP39
SYCE1L
MON1B
COMMD1
CCT4
UBR7
GON7
GNAQ
FUT10
TNFRSF1A
PLXNB2
IQANK1
FAM83H
FAM20B
USPL1
HMGB1
ACTN4
METTL3
BHLHA9
ZNF546
LDAH
GRPEL2
TSC2
NTHL1
NME6
RIN1
HMG20B
TNNT1
TNNI3
ZG16B
TBATA
CDC42EP4
NOS1AP
UBL7
SLC24A1
INTS14
RPS16
FAM240C
ZMYND8
PFKP
DYNC1LI1
FOXA1
ZNF197
GABPB2
SRGAP2
FAM72A
FAM207A
EAPP
RIC3
ZNF446
ZNF324
TPD52
CCDC61
EMB
NOTCH2NLA
HNF1B
NUDCD3
EED
SEC16A
RARA
C9orf163
ZNF512
C2orf16
PSMB7
GTSE1
FLNA
EMD
DHX8
VAMP2
BCAS2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
MAPK13
COLEC11
ZNF860
OSBPL10
IL12A
GRK6
EDN1
NEU2
SNRPB2
MLPH
ETFA
SCARB2
NMT1
FAM47E
DCAKD
TRIM4
GJC3
CEACAM3
ZC3HC1
SDSL
EYA3
TMEM251
MOAP1
DUSP6
DSTYK
VPS37B
EFCAB2
BTG2
SCAND1
RBBP5
SLC25A36
SLC34A3
SH3PXD2A
RNF224
RNF208
CYSRT1
ZNF518A
LEMD2
ELL
CPNE8
TRIM17
TRIM11
TBC1D30
TTC14
CFAP58
SPOPL
PPM1H
SLC25A32
LSG1
ID1
DCAF13
INTS12
GSTCD
GATA6
SFTPB
CHD8
SHKBP1
MEF2A
WDR97
PHF14
MAF1
CYC1
TMEM129
TACC3
SLBP
DCAF10
USP38
TAFA3
RUSC1
PPM1J
PLA2G15
ESRP2
CLDN4
CARMIL1
MYEOV
MRPL1
GSE1
VPS26A
TMEM210
TIPRL
SNAPC1
LRRC26
EIF2AK1
CA4
KATNIP
GTF3C1
ANTXRL
TOR1AIP2
TOR1AIP1
RAD51AP1
NOXA1
LUC7L2
C12orf4
PDE11A
TVP23B
TMEM262
SPOP
NECTIN1
TFF3
AP1M1
PMPCB
LOC389831
FNBP4
USP9X
PRKAB1
NEK5
UNK
RPH3AL
NFKBIZ
H3-3B
H2BC21
H2AC21
H2AC20
ARHGAP8
RAPGEF3
PLAUR
F2RL1
TKFC
EXOSC5
DDB1
BCKDHA
UST
TRIM35
RPL37
PTK2B
CLDN2
CARD6
DNAJC25-GNG10
DNAJC25
ARL8B
TFF1
LSM12
KLHDC8A
G6PC3
FAM214A
TTC6
PTER
PLA2R1
PDAP1
NPDC1
MAML2
ENTPD2
BUD31
SLC39A6
RWDD1
CNFN
TMTC3
TAT
PLCD1
KCNAB3
IFRD1
CNTROB
CEP290
SLC33A1
MAPK9
TOP3B
RNFT1
CPOX
UAP1L1
SYNGR2
SAPCD2
ADORA2B
PPIP5K2
NAV2
GNPDA2
GIN1
TXNDC5
SPAG9
ZNF410
TNFAIP8L2
TMOD4
TMEM51
TMEM150A
THEM4
SRP19
SNRPA
SCNM1
RNF181
LYSMD1
INTS2
C19orf54
UBE2L3
SULT2B1
RIMBP3C
RIMBP3B
BRINP3
ANKRD33B
ALG10
SETD9
PRRC2B
PDE8A
CNIH3
TSKU
SRGAP2C
FAM72B
RBM19
RALGPS1
RAD23A
PIP5KL1
HES7
FARSA
DPM2
CNBP
CALR
ALOXE3
TRPM4
SPEF1
PCM1
HRC
CENPB
CDC25B
ZNF705E
PMP22
ALG10B
TSEN54
SPHK2
RPL18
MRPL33
LLGL2
FAM83E
CASKIN2
BIN2
TRIB1
STAM2
PGBD4
MDM4
FAM178B
EMC7
TMEM87A
LRRC71
GANC
FUT4
ERCC1
DDX59
COA6
ZFP62
TBPL1
KRR1
FITM2
CRLF2
ZBTB7B
VAC14
TPTE
SWSAP1
NUP54
NRAS
LENEP
HLA-E
GSPT1
DISP1
ATR
ARG2
LNPEP
CCDC22
CACNA1F
C9orf64
SRSF7
SLC25A53
FAM199X
RASEF
KIF26A
ABCA3
UNC45A
TRIP4
RHOBTB2
PCLAF
NPM1
HDDC3
EGR1
TMEM216
NPTX1
BECN1
SOAT1
RPS19
MRPS33
PRKAG3
PPP2R5E
PDS5A
LINS1
GOLM1
ASB7
ALDH3A1
LAG3
HDAC8
ZNF331
PROS1
ARL13B
PPP6R1
MID1
SMARCC2
LIN54
PSMC5
MPPE1
FTSJ3
ZNF366
WDR54
MPZL1
GOLGB1
EHMT1
DDA1
CLCN4
C2orf81
C11orf49
ARRDC1
KAZALD1
ERBB3
OSBPL7
MRPL10
LSM5
LRRC46
H4C8
AVL9
RHEBL1
RABEP2
MAP1LC3C
KMT2D
CD19
AHCYL1
TPD52L2
BZW1
ABHD16B
VAMP1
UBE3B
SGPP1
HNRNPA2B1
EPB41L4B
CBX3
ATXN2
THUMPD2
PNPLA5
DGKD
KPNA6
EPB41L1
WRAP53
TP53
TJP2
SF3A3
ZFYVE9
PPIL2
PCIF1
NDUFA4
GATAD2B
FRAT1
B3GAT2
CLMN
REEP3
JMJD1C
ERCC6L2
ZC3H10
VPS11
SYT12
SNED1
RPL41
ESYT1
OSER1
GPAA1
GALNT10
EXOSC4
ESCO1
SLC35B1
PIGC
C1orf105
SLC35A1
RPL12
LRSAM1
ETFBKMT
MFSD2B
STK33
METTL2A
MEIG1
DCLRE1C
COX7A2L
RAB27B
RPS29
TRMT6
MCM8
CKMT1A
SHISA5
HES1
GLB1L3
VCAN
CLCN5
RAB5C
ID2
TFB2M
NAGPA
CNST
TP53INP1
SERTAD1
RANGAP1
PRX
FNTB
ZMPSTE24
NDRG1
EDN2
TEFM
SDHAF3
SASS6
KCNH8
ABR
TSPAN4
TPK1
POLR2L
PLEKHB2
NOSTRIN
DPY19L3
BEND7
WWP1
SELENOV
DLL3
ARFGEF2
APBB1
RNF20
NCR3LG1
CDH1
MMP9
MUC5AC
STMN1