ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
SLC2A10
ADNP
TRIM3
TIMM10B
ARFIP2
BCL3
DUX4
STARD10
POLR3B
MTRNR2L8
MTRNR2L2
MSH3
DHFR
PLCB4
RTBDN
MAST1
BMP7
ARL14EP
REXO4
ADAMTS13
SLC23A1
PROB1
MZB1
MYADM
C9orf152
CCDC59
MRPL44
MOB4
ERGIC1
TET3
S100A16
S100A14
PSMD6
AFF4
ARHGAP40
FLYWCH2
PCCA
PSRC1
SPRYD3
KRT18
EXOC2
GNPNAT1
STX16
TACO1
CUEDC1
NOL11
COL23A1
ZNF500
MUC5B
TMEM87B
TTC39A
UCHL5
RO60
ZNF609
KIF5C
CNOT3
LMNB2
ANKRD60
PMEPA1
BAZ2A
FLYWCH1
PAQR4
KREMEN2
SCAMP1
SMG8
FASN
ART1
FAM221A
N4BP3
ZFP36
PLEKHG2
KMT2C
PTPRN2
INKA2
DDX20
ARHGAP39
GNAQ
TNFRSF1A
IQANK1
FAM83H
ALG8
ZNF217
FAM20B
USPL1
HMGB1
SKA2
PRR11
SNAP29
PI4KA
TOP3A
SMCR8
DNAJC10
LDAH
MED23
ENPP3
MADD
GGPS1
ARID4B
REPS1
ZG16B
EIF1AD
CST6
BANF1
FAM240C
HIPK1
ZMYND8
DYNC1LI1
FOXA1
NOTCH2
GTPBP6
FAM207A
EAPP
PHRF1
TPD52
EMB
IER3
FLOT1
NOTCH2NLA
REXO5
ERI2
BLOC1S5
EED
SEC16A
C9orf163
VPS13B
PSMB7
FLNA
EMD
CYRIB
BCAS2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
ZNF860
OSBPL10
GRK6
EDN1
NDUFS3
KBTBD4
FAM180B
KANSL3
FER1L5
SNRPB2
MLPH
ZNF408
ARHGAP1
USP32
FAM227B
DTWD1
BCAS4
IPPK
SCARB2
FAM47E
MARCHF7
NQO1
ATP5MC2
ZC3HC1
DUSP6
DSTYK
RPS7
VPS37B
DPY19L4
RBBP5
SLC25A36
SLC34A3
RNF224
RNF208
CYSRT1
ZNF518A
LEMD2
CPNE8
NOTCH2NLC
ECT2
TBC1D30
TRIM37
MTRNR2L1
RBSN
TMEM199
SEBOX
POLDIP2
SMIM14
PPM1H
LSG1
ID1
CYREN
INTS12
GSTCD
FRG2
CEP63
ANAPC13
NOTCH2NLB
CHD8
WDR11
MEF2A
WDR97
PHF14
MAF1
CYC1
DCAF10
PPIP5K1
CKMT1B
USP38
TAFA3
RUSC1
PPM1J
PLA2G15
ESRP2
CARMIL1
MRPL1
GSE1
SCYL3
APPBP2
TRIM33
TMEM210
SNAPC1
LRRC26
CA4
TOR1AIP2
TOR1AIP1
NOXA1
LUC7L2
TMEM183A
PMVK
TMEM262
SPOP
NECTIN1
TFF3
AP1M1
PMPCB
DEDD
CXXC5
USP9X
NEK5
AP3B1
UNK
H3-3B
H2BC21
H2AC21
H2AC20
ARHGAP8
OTUD7B
UST
RPL37
CARD6
SP1
AP3S2
TEX14
RAD51C
DNAJC25-GNG10
DNAJC25
ARL8B
EEF2K
TFF1
RTEL1
STMN3
TTC6
PCYT1A
SULF2
TLNRD1
BCAS3
SLC39A6
ZBED8
MICA
GABPB1
IFRD1
ADPRHL1
ATAD2
SLC33A1
MAPK9
FFAR2
TOP3B
CPOX
SYNGR2
MMADHC
UTP25
PPIP5K2
GNPDA2
GIN1
FRG2C
ZNF410
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
INTS2
BRINP3
ALG10
SETD9
PDE8A
TSKU
PGK1
CNBP
BRIP1
ALG10B
TSEN54
SPHK2
RPL18
LLGL2
FAM83E
CASKIN2
LRP6
TRIB1
MDM4
CIAO3
DDX59
MUC2
ZNF197
ZFP62
TBPL1
KRR1
ZBTB7B
TPTE
SWSAP1
NUP54
NRAS
LENEP
GSPT1
ATR
DGKA
PLXNB2
LNPEP
PPM1D
SRSF7
CLTC
MUC3A
RASEF
KIF26A
TRIP4
PCLAF
NPM1
EGR1
MRPS33
PPP2R5E
PDS5A
LINS1
GOLM1
ASB7
PSMC5
FTSJ3
SNRPB
NCOA3
ZNF446
ZNF324
GOLGB1
EHMT1
ARRDC1
VMP1
PTRH2
CRNKL1
CFAP61
ERBB3
TANC2
LSM5
AVL9
IL2RA
RHEBL1
KMT2D
AHCYL1
TPD52L2
BZW1
ABHD16B
SLC24A1
INTS14
SGPP1
HNRNPA2B1
CBX3
ATXN2
SF3A3
ZFYVE9
B3GAT2
ERCC6L2
ZC3H10
RPL41
ESYT1
OSER1
PIGC
C1orf105
SLC35A1
RPL12
LRSAM1
HMG20B
TUBD1
RPS6KB1
RAB1B
METTL2A
GABPB2
RPS29
HES1
RGS19
OPRL1
LKAAEAR1
VCAN
ZMPSTE24
KCNH8
TPK1
WWP1
ARFGEF2
DCLRE1B
AP4B1
RNFT1
ZDHHC1
ZNF655
FAM200A
TRIB3
CST3
TDRD10
SHE
CST4
CST2
KMT5A
SYT5
DNAAF3
DMTF1
FAM228A
SLC16A5
PALM3
MISP3
P2RY6
CST1
RPL32
DPF1
GALP
POLR3F
DZANK1
RAPGEF6
RPS26
SLC25A40
DBF4
LAMTOR1
ANAPC15
SPTBN4
BLVRB
PPL
SNX1
CIAO2A
NARF
CYBC1
PHC2
GORAB
NKX2-8
SGO2
SLIT3
ODC1
MTOR
RDH5
CD63
C6orf89
TNS4
ZFP37
ETV2
COX6B1
SLC1A5
CALCA
EMSY
LOC102724770
DGCR6
CCDC97
UBE2K
NAPSA
ITGB5
BCL2L13
ATP6V1E1
RMND1
ARMT1
ZMAT2
HARS2
HARS1
WDR55
SLC51B
DND1
TRIM59
ZNF106
SNAP23
CCDC102A
ASNSD1
ASDURF
ZNF576
IRGQ
TEP1
RPEL1
RAC3
LRRC45
DCXR
CENPX
CCPG1
C15orf65
SDHA
CCDC127
TPCN1
AP2S1
GLYATL1
EIF4A2
C3orf35
SLC10A5
IMPA1
RPS6KB2
PTPRCAP
MDFI
SCIMP
ING4
PRORP
PPP2R3C
ESM1
RUVBL1
MAPKAP1
TTC9B
FAM72C
CCNP
UEVLD
SERPINH1
B3GNT2
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
PSMD14
CELF2
UBAP1
CTDSP2
RABEPK
CAV3
ZNF335
ZHX3
TEN1
MPEG1
ACOX1
SLC7A8
KRT86
CLDN23
RIPOR3
SRGAP2B
FAM72D
SYCE1L
MON1B
COMMD1
CCT4
UBR7
GON7
FUT10
ACTN4
PARD6B
METTL3
BHLHA9
ZNF546
GRPEL2
TSC2
NTHL1
NME6
RIN1
TNNT1
TNNI3
TBATA
CDC42EP4
NOS1AP
UBL7
RPS16
PFKP
SRGAP2
FAM72A
RIC3
CCDC61
HNF1B
NUDCD3
RARA
ZNF512
C2orf16
GTSE1
DHX8
DRD4
VAMP2
NACA2
MAPK13
COLEC11
IL12A
NEU2
ETFA
NMT1
DCAKD
TRIM4
GJC3
CEACAM3
SDSL
EYA3
TMEM251
MOAP1
EFCAB2
BTG2
SCAND1
SH3PXD2A
ELL
TRIM17
TRIM11
TTC14
CFAP58
SPOPL
MAMDC2
SLC25A32
DCAF13
GATA6
SFTPB
RGPD2
RGPD1
SHKBP1
TMEM129
TACC3
SLBP
CLDN4
MYEOV
KMT2A
VPS26A
TIPRL
EIF2AK1
KATNIP
GTF3C1
ANTXRL
RAD51AP1
C12orf4
PDE11A
TVP23B
MVD
LOC389831
FNBP4
PRKAB1
RPH3AL
NFKBIZ
RAPGEF3
PLAUR
F2RL1
TKFC
SECISBP2
EXOSC5
DDB1
CKS2
BCKDHA
TRIM35
PTK2B
CLDN2
LSM12
KLHDC8A
G6PC3
FAM214A
EIF2S1
ATP6V1D
PTER
PLA2R1
PDAP1
NPDC1
MAML2
ENTPD2
BUD31
RWDD1
CNFN
TMTC3
TAT
PLCD1
KCNAB3
CNTROB
CEP290
UAP1L1
SAPCD2
ADORA2B
NAV2
TXNDC5
SPAG9
TMEM51
TMEM150A
THEM4
SRP19
SNRPA
RNF181
C19orf54
UBE2L3
SULT2B1
RIMBP3C
RIMBP3B
ANKRD33B
PRRC2B
CNIH3
ZNF165
SRGAP2C
OR1F12
FAM72B
SEC22B
RBM19
RALGPS1
RAD23A
PIP5KL1
HES7
FARSA
DPM2
CALR
ALOXE3
TRPM4
SPEF1
PCM1
HRC
EIF4B
CENPB
CDC25B
ZNF705E
PMP22
MRPL33
CSDE1
BIN2
STAM2
PGBD4
FAM178B
EMC7
TMEM87A
LRRC71
GANC
FUT4
ERCC1
COA6
FITM2
CRLF2
VAC14
HLA-E
DISP1
C3orf14
ARG2
CCDC22
CACNA1F
C9orf64
SLC25A53
FAM199X
ABCA3
UNC45A
RHOBTB2
HDDC3
TMEM216
NPTX1
BECN1
SOAT1
RPS19
PRKAG3
ALDH3A1
LAG3
HDAC8
ZNF331
RNF6
PROS1
ARL13B
PPP6R1
MID1
SMARCC2
LIN54
MPPE1
ZNF366
WDR54
MPZL1
DDA1
CLCN4
C2orf81
C11orf49
KAZALD1
OSBPL7
MRPL10
LRRC46
H4C8
RABEP2
MAP1LC3C
CD19
B4GALNT3
VAMP1
UBE3B
EPB41L4B
THUMPD2
PNPLA5
DGKD
KPNA6
EPB41L1
WRAP53
TP53
TJP2
PPIL2
PCIF1
NDUFA4
GATAD2B
FRAT1
CLMN
REEP3
JMJD1C
VPS11
SYT12
SNED1
GPAA1
GALNT10
EXOSC4
ESCO1
SLC35B1
ETFBKMT
MFSD2B
STK33
MEIG1
DCLRE1C
COX7A2L
RAB27B
TMEM121
TRMT6
MCM8
CKMT1A
SHISA5
PFDN4
TBX4
GLB1L3
CLCN5
RAB5C
ID2
TFB2M
NAGPA
CNST
TP53INP1
SERTAD1
RANGAP1
PRX
FNTB
SIKE1
NDRG1
EDN2
TEFM
MRPL21
IGHMBP2
DMXL2
SDHAF3
SASS6
ABR
TSPAN4
POLR2L
PLEKHB2
NOSTRIN
DPY19L3
BEND7
SELENOV
DLL3
APBB1
RNF20
PPM1E
NCR3LG1
CDH1
MMP9
MUC5AC
STMN1