ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3075718 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◣ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

HGC6.3
ADCK5
BRD3OS
WFIKKN1
SSBP2
ZHX3
ZBTB37
GLIPR1L2
BAIAP2L1
OSGIN1
HEXIM1
GFI1B
GCNT3
CXXC5
BSPH1
BTBD2
ANO7
STXBP1
SBNO1
CUL3
FBRS
PBX2
ULK1
HDDC2
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
MTRNR2L8
UBE2L5
CIB3
USF3
CAPN12
SCYL3
IQUB
SPATC1L
PRELP
KASH5
JRK
ESRP1
SPOP
COTL1
SMARCD3
KCTD9
CDCA2
H3-3B
SETDB1
SLC29A4
SPRING1
RNFT2
CDK18
LARP1
MRC2
SMG7
CCDC7
CACNG6
SYNGAP1
VLDLR
MSRB2
ATXN7
TRIB1
SUZ12
ZNF512B
ARF3
C10orf67
APOBR
PI16
NPRL3
LRRN3
MTMR4
PRR12
USP34
TLCD1
BIRC7
C17orf58
SPIRE2
MTRF1
DSTN
BFSP1
SIGIRR
USP38
SLC8A2
PHF21A
RASSF2
ZNF524
FIZ1
CBLC
RNF43
SP3
KCTD13
TMEM65
JPH4
C17orf64
RSF1
AAMDC
TUBA1C
MECOM
LARGE1
ALKAL2
TLK1
ARFGEF2
BCAS3
CATSPERG
CMBL
UPF2
CAP2
TFEB
POLK
CERT1
USP32
IGLON5
C16orf72
ACTR3
MEAK7
NIM1K
NAV1
APPBP2
FOXJ2
CDC42EP5
EFCAB2
MSI2
CLTC
LHFPL2
CACNA1S
POU2F1
GREB1
ITPR1
FOXA2
SP1
DDI2
INTS9
HMBOX1
NAP1L5
CST3
RCAN3
CTCFL
NKX2-1
MTRNR2L2
MYADM
SATB2
ZNF148
KCNQ2
CHRNA4
PCBP2
MYL12B
PHF23
VNN2
KLK7
RPH3A
PRDM11
OCLN
CREM
NPEPPS
DHX34
OR10H5
TSHZ3
FBXL19
PI4KB
MED6
LHX6
RASSF5
MDM4
TXNIP
PLCXD1
DYNLL2
PLXDC2
AHCYL2
SERPINA3
ZNF205
IL26
PLCB1
ADNP
TAF6L
HERC4
CREBRF
FOXK1
CNPY1
LMNB1
ARID2
BRD2
BBX
GTF2H4
FBXO11
SMG1
SIGLEC15
ADAMTS9
VILL
ZFR
PPM1D
TSC22D1
SKA2
PRR11
CA11
BRIP1
BCL2L2-PABPN1
BCL2L2
LAMC1
HMGB4
MRGPRE
ERICH6
ARC
BCAP31
ABCD1
ZNF131
SBK2
ATXN1
RALY
KCNK15
CROCC
CPLX2
PTPRH
LMBRD1
PPP1R21
KMT2E
WBP1L
TMEM170A
LRATD2
KCNN4
TMCO3
PRPF40B
DCUN1D2
TRA2A
PABPC1
MSRB3
HSD17B14
HMGN1
RARG
PHF2
AAAS
HOXC11
AMZ2
UBE2B
CDKL3
GNG8
PPP2R5C
GZMM
GNAS
MEF2C
STAT6
MADD
ATXN7L1
SCYL2
DEPDC4
BMI1
KCNIP2
GRP
RNASEH2C
MRPL38
TLCD3B
CALHM2
TAF7L
TMEM271
CDKN3
TMEM126A
TCL1B
PPP1R13L
POLR1G
WDR26
TMEM30A
SOCS2
NCOA3
GTF2IRD1
SLC25A19
RIMS2
RNF19A
KLHDC10
KCNB1
CCK
UNC80
S100A16
PTGIS
PPP1R16A
KIF6
ATP4A
SPRY3
SHOX2
SEC13
ID2
HSPA1L
HSPA1A
APCDD1
GDF6
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
GABBR1
UBTD2
RIPOR3
NFAM1
MTOR
GJA1
TASP1
IRX6
EFS
E2F3
SEZ6L2
RBM27
ASPHD1
DDX59
CAMK2D
AJM1
BRPF1
ZEB1
PHF7
BAP1
PRAC2
PRAC1
KSR2
GATAD2B
ORC4
NPC2
MBD5
ISCA2
DPEP1
GSC
TRAPPC2L
GALNS
DGKH
TM4SF1
CPNE6
NTNG1
KLK6
DNAJC27
ZNF384
TFAP2A
DOK5
SP2
STX16
COL20A1
PDE1B
SERPINI1
ROCK2
PDCD10
KRT8
WNK1
IREB2
PRPF40A
ARL6IP6
DCAF5
RNASE4
ANG
MARCHF6
RUNX1T1
ARRDC4
SDC2
FAM214A
TNPO3
SNX16
ANP32B
PAN3
NUCKS1
MYOZ3
GABPB2
TECPR1
LHX4
LIN7A
BCL9
RGS9
CTDSP1
AURKC
ATF7-NPFF
ATF7
CXXC4
COLEC11
RNF41
IKZF2
SIPA1L1
PRSS22
LRRC4B
ITPRID2
FIGNL2
SRSF9
PRRC2B
NUDT16L1
DYNLL1
PPFIBP1
BPTF
PRAME
LDB2
DRAP1
C11orf68
ZNF462
RAP2C
DUSP4
CFAP410
C1orf21
FAM117A
CDC25B
POLR2H
FADS2
FADS1
CLCN2
RIN2
JDP2
DICER1
SH3KBP1
IQCE
EBNA1BP2
CSNK1D
CFAP57
TRIM56
RNF139
CIART
ALMS1
INPP5F
PTGIR
RC3H2
BACE2
PAK1
MLLT10
STRN3
AP4S1
SV2C
SLC39A7
RXRB
TSC22D4
ADRM1
ATXN7L3
JARID2
RSPH6A
KCNK3
CDV3
TNS1
NRL
HIF1A
DCAF11
PODNL1
DCAF15
AMHR2
PDXDC1
PCF11
DCDC2C
CACNB4
TPTE
SCN1A
MED25
STMN3
FEZF1
UBE2Z
TOP3A
SMCR8
MAD1L1
CTBP2
SEMA3F
ADGRG1
ZNF768
HES3
TMEM119
SBK3
SNRNP200
NRCAM
UBR3
PRR5L
NEDD4
ALPK1
PGAM1
SKAP2
FOS
SOCS5
SKIL
NEU4
ACAP2
YWHAB
SYTL2
NKX3-1
CPLX1
SPOPL
SH3PXD2B
EIF4B
TTC6
RORC
FOXA1
ZMYM2
TRIM9
DLX1
ABI1
DUSP16
FAM168A
ZFHX3
RAB11FIP2
CD63
KLF4
FBLIM1
TRIM46
TMEM94
HNRNPF
BCAS1
SMURF1
UBR5
SCLY
NEGR1
ELF2
ASPHD2
TMEM245
RIF1
TSC1
SH2D3C
TEDC1
CRHR1
BNIPL
ARHGEF5
MFN1
SEPTIN2
PGR
HDLBP
ZNF71
B3GALNT2
SELENBP1
AADACL4
UBE2D3
SCAF8
DNAH2
RAB5B
DEFB4A
ARID4A
UBE2R2
ASTN1
KCNJ15
GJA5
ARHGEF35
PTPRCAP
CST4
AMPH
NOVA1
TMC4
GAB1
RABGAP1L
COBL
RASGRF1
NUP155
HOXA4
BASP1
ACOXL
ZFHX2
NDRG2
ARHGEF40
LGI4
RPS19
CBX8
FOSL2
CREBZF
ZDHHC17
MARCHF10
KCNV1
EYA4
ACER3
NACC1
USP35
KCTD21
TEX9
RFX7
PRDM12
LYPD4
DMRTC2
SLC25A6
ZBTB20
VIPR2
PLPP2
AP1S2
PHF1
ILF3
HDGF
CSNK1G1
FABP6
SIX3
PRAMEF7
FNDC11
PNPLA7
MRPL41
MAPK3
DTX1
SLC22A23
DLG4
BCAM
ACADVL
OR1F1
CD164
XIAP
STAU2
MAPRE3
JPT1
ITGB2
FBXL13
ARMC10
SIX4
MGAT1
LRCH4
FBXO24
GET4
USP25
PARD6B
NLGN2
HPSE
NUMB
HBZ
CDK4
CCDC59
RUFY4
PAFAH1B1
C1RL
IQSEC3
CEP170B
PIK3C2B
MYBPH
PCK2
BAZ2A
ADAP1
SYNCRIP
MACIR
HNRNPH2
UBL4B
UBE2E2
PHACTR3
HOXC13
CAND2
SRGAP1
SHISA5
HBA1
CNTNAP1
CCR10
C11orf86
NR6A1
THUMPD2
NCCRP1
MOCS1
LRP6
CST5
SUMO1
NYNRIN
STK35
SOX13
FOXG1
PTPN4
FAM110A
DRP2
OMA1
DAB1
KAT6B
CRYBG2
RICTOR
MBOAT7
HEXB
EXOC3L4
FKBP1A
SLCO2A1
CAMK1D
STAG2
STAU1
NPAS2
ITGAV
RGPD2
RGPD1
HADHB
HADHA
ZNF277
STXBP5L
SPARC
FAM83A
DOCK4
GARS1
ZIC4
RNF214
PRR7
PCSK7
MAD2L1BP
GTPBP2
CRLF2
CDH18
TC2N
SKOR1
PHACTR2
MCTP1
ZSWIM6
MYC
CACNG4
UTP18
PPFIA3
NR1D2
MBTD1
HOOK1
CLDN12
C19orf73
PTPRD
PCDH20
RAB6A
SHISA7
PSMD6
MX1
POLR1D
LNX2
EIF5AL1
CRIP2
TRABD2B
HNRNPDL
ARHGAP5
ARHGAP21
POLD4
HOXB7
CTNNA1
AZU1
AMOTL2
SALL2
GAGE12H
GAGE12E
GAGE12D
GAGE12C
AKAP13
THAP12
GVQW3
GLI3
SYNDIG1L
CLIP3
ALX4
UPK3B
INTS3
TUT4
TCAIM
SLC35C1
PPP4R3B
NLK
LHFPL3
GPR162
FUT1
FGF21
PRPF3
PPP2R2A
BMT2
KPNB1
DLG3
ADIPOR1
PDP1
TLE2
RBMS2
MINDY1
RNF224
NPTN
MMD
FOXO3
CHCHD3
ATG9B
NTRK3
ZBTB4
POLR2A
MAP2K2
C1orf159
TDRD12
CLDN15
SLC16A6
NME8
ARSG
R3HDM2
NSD1
BRSK1
TIPARP
RNF225
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12G
GAGE12F
GAGE12B
METTL27
FHDC1
CIC
ZNF444
TUFT1
SYT1
NPIPA1
LOC100132202
FIS1
ACTR3C
VSTM2L
RDH8
PLEKHA6
GNAQ
ZNF575
UNC45A
NCDN
KIAA0319L
UPK3BL1
PRKAR1A
USP16
STRADA
SEMA4D
PTK7
PRPF38B
ADSS1
POTEM
FBXO41
CYP24A1
ARHGAP22
CRELD1
C6orf136
PKNOX1
TNFRSF1A
STPG2
GLIS2
CHST3
CALM1
SMIM5
OC90
C9orf152
ZNF423
STK38
SMAD2
GRB2
FLT3LG
ADAM10
ZFP36L1
SURF2
SURF1
PRKCB
GFOD1
UBAP2L
C1orf43
TUBG2
DNMT3A
DDX3X
TET2
SPATA2L
SCAI
PRKCA
PAPOLA
MARK2
KLK8
GRAMD1A
SETBP1
KIAA2026
DNMT3B
PDCD1
NOL4L
LRCH1
FYN
WWP2
TSPYL2
SALL4
SEMA4G
SCN5A
GGPS1
CPT1C
ARID4B
PDCL
NMRK2
FCGRT
FAM180B
AGRN
PRTFDC1
HIP1
HDGFL2
ZDHHC20
IGSF9
MLF1
ZNF827
PRKRIP1
KCNH4
FLRT1
ZBTB45
PAPLN
SPATS2
MORF4L1
EPS8L1
DOCK11
BICDL1
HNRNPA3
CDYL2
SELENOW
PRKCH
DACT1
PPM1H
HNRNPLL
ACHE
SRGAP2B
LMBR1
IRF2BPL
FAM72D
FAM72C
CDH24
ZNF628
MINK1
LOC102723623
GOLGA6L1
UTP4
STYX
RPS6KA5
DNAJC13
DGLUCY
DERPC
CHTF8
OSBPL7
B4GALT5
ZNF687
TRIM37
SYDE2
HSPA2
SCAF11
POTEF
NKIRAS1
CARD11
BAZ2B
ZIC2
UFSP1
RAI2
NME1-NME2
NME1
NEXMIF
KLF16
KIF26A
CDK17
TPM2
PDE4A
SYTL1
SPPL2A
RAB1A
NAT16
LTBP1
GRTP1
TOX4
RAB2B
PTPA
PRSS33
CRAT
C14orf28
BANP
AMMECR1L
SRGAP2
LRRC37A3
FAM72A
CPEB2
ANTKMT
ZNF641
SLC12A9
RNFT1
RBPJ
PFKM
NRP1
MEIS2
LHX2
FBXL4
PRR14
PLCB3
ARFGEF1
SYN3
SAMD1
PPP2R5E
FAM122C
FAM122B
TPRX1
SIN3A
POC1B-GALNT4
NPIPA3
NPIPA2
GALNT4
GAGE1
PPP1R12A
FGF17
C9orf16
ASMT
ARID1A
NRXN1
NRG1
DPP6
CUL1
POPDC2
LEPROT
LEPR
INAFM1
GLRX2
CCDC74A
WDR97
PIKFYVE
MB
EBI3
DGKI
RHOH
AMZ1
RAB30
DCLK1
TTYH2
MED13L
EZH1
ARNT
ZNF160
SHD
CLEC18C
BRAF
IL9
FOXP4
PCDH7
NXT1
NAMPT
FZD1