ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916935 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◣ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

NCOA7
POLR3E
PGK1
PRMT5
B4GAT1
H4C8
SACM1L
BCAR3
LUC7L2
FMC1-LUC7L2
FMC1
HSPA6
LTA4H
TIA1
FBXO31
MTRNR2L2
ZNF839
RPS29
POLG
GSTA4
PPP6R3
METTL26
ILF2
KNL1
C8orf37
DPP9
SHF
RAB11A
DCT
HMGN4
PDE4A
NDUFS7
MTRNR2L8
MVK
RNASE4
ANG
SMARCC2
SLC35E2A
CCDC107
NEMF
RGPD2
RGPD1
BRAF
EEF1A1
SLC35E2B
LASP1
PPEF1
ATP1B3
HES4
TMEM259
NPAS4
GBA
APOA1
WBP4
ELF1
RBM23
VPS37B
FAM71E1
EMC10
HECA
ZBTB21
PAK1
SLC27A4
MTRNR2L9
RBKS
BABAM2
RFX1
RPL9
LIAS
ALOXE3
RANBP2
ELL2
HOMER1
OPA3
JOSD2
H2BC10
PAXBP1
RALGAPA1
KRT6C
FOXJ3
CYP4F11
PSIP1
PHRF1
EIF3B
JUNB
NSUN4
FBXO34
ELOVL5
HROB
PARP2
TSPAN31
OR1F1
DYNC1LI2
SIRT2
NFKBIB
USP36
ZBTB4
POLR2A
SRI
PDXDC1
NOL8
CENPP
ANKRD13A
ANKLE2
SS18
UFSP2
CSNK1G2
TIGD5
EEF1D
GOSR2
TARDBP
JOSD1
STK38L
HSP90AA1
UROS
BCCIP
TMUB2
KRT6B
PIK3R3
TMEM260
SLBP
SUDS3
RHBDD3
EWSR1
ZNF576
IRGQ
NDUFB1
CPSF2
CDON
PRKCI
PTDSS1
MTERF3
UBE2I
OXSR1
FUS
EGR1
SETD5
STK35
GARS1
BZW2
ANKMY2
LOXL3
DOK1
XRCC6
DESI1
HDAC2
COMMD1
CCT4
CD164
FEM1A
ASAH1
CDK16
CDC14B
UBC
HADHB
HADHA
LRP2BP
ANKRD37
SNX16
EED
MAPKAPK5
ZNF547
TRAPPC2B
NOCT
YY1AP1
DAP3
ATG101
IQCH
AAGAB
BCAS2
KRT6A
PRDM10
LYRM4
FARS2
BCL6
RBM42
CWC25
NUP205
TEAD1
WARS2
PDAP1
BUD31
RRNAD1
ISG20L2
FLCN
POLR1H
STX6
C19orf48
PSMG2
CEP76
MIA2
XPNPEP3
ST13
ILRUN
NUDT18
DOHH
PPP5D1
CALM3
POLR2M
TCP11L2
SLPI
TPBG
OXR1
GNB2
DCTN1
ICE1
ATP9B
KPTN
CACTIN
JARID2
PAXIP1
RPN2
MROH8
FABP5
RBM17
PNO1
UBE3C
TIMM22
SMC2
MED23
ZNF300
PFDN4
CENPE
SFN
HSPE1-MOB4
HSPE1
HSPD1
FAM227A
CBY1
VDAC2
SMC3
H2BC15
H2AC15
FANCD2
PWWP3A
DUSP1
HINT3
STK19
DXO
FBXO33
STAM2
MAP1LC3A
KRT10
COX7A2L
SELENOW
USPL1
HMGB1
ZBTB6
SASH1
EFTUD2
CCDC103
RPL21
POLR3F
DZANK1
TRIAP1
SPAG4
C12orf66
LGALSL
PMVK
PKNOX1
VARS1
EXOSC9
ESYT2
EMD
MGRN1
SUPV3L1
BTBD9
ZNF516
UPF2
C21orf91
NFE2L2
RNASEK
SELENOK
RAB28
PPP1R13L
POLR1G
COQ7
PEX3
ADAT2
AREG
ALDH4A1
ACTR10
RNF44
KRT17
WRAP53
TP53
EIF4ENIF1
CENPN
PEF1
RAD23A
MYL12A
FOS
CAPRIN1
ACOT7
NDRG1
KRT16
ZFAND3
DDIT4
ZNF35
TDRD7
MAGOHB
MLST8
LANCL2
RRM2B
CSNK2A1
PPM1L
MYL12B
APTX
FRAT2
SLC35B1
SUGCT
MPLKIP
ARL6IP1
USP17L8
BIRC2
RMND5B
SMARCE1
INAVA
UBE2B
CDKL3
FRAT1
HSPB1
PAK1IP1
C6orf52
ANKRD13C
TBCK
AIMP1
SSU72
ATP8A1
EIF5
TSNAX
BLCAP
JUN
COX18
UQCRC2
ZFP36
USP15
GABARAPL1
IPO13
FAM53C
CDC25C
ATG16L2
MRPS7
GGA3
YTHDC2
KRT5
DENND2C
TACSTD2
RPS23
ATP6AP1L
SFSWAP
IL1RL2
TTLL7
SLC35F3
BRAT1
UNK
H1-2
DMAP1
H2BC11
H2AC11
HAT1
ABHD6
ZNF219
NFIB
MAP3K2
UCHL3
COMMD6
LIN54
BTG2
BRPF1
LRPPRC
MED16
JUP
DMKN
UIMC1
AKIRIN1
ASMTL
CBWD6
CBWD5
CBWD3
MIA3
YBX3
FKBP3
TADA3
ARPC4-TTLL3
ARPC4
ADNP
ULK4
TSPAN4
PSTK
POLR2L
IQSEC3
RLF
BZW1
TRIM39
DDX5
CDKL4
NDST2
UGCG
STX4
UBE2H
NUDT15
PRPF40A
ARL6IP6
HPS5
GTF2H1
KLF7
PIP4K2B
TAF9
RAD17
AK6
RBBP6
HGC6.3
LCE3E
TLE1
VPS8
NBEAL1
TOB1
NDUFA10
DNAJC25-GNG10
DNAJC25
ATF7-NPFF
ATF7
DPH6
USP47
KCTD5
TRMO
GALK2
COPS2
OGDH
CBWD1
CTNNAL1
DTWD2
KPNA4
ZNF367
NIPAL1
CNGA1
H3-3B
TTC23
LRRC28
GTPBP10
AHR
ANKRD18B
DENR
ACTB
CDIPT
EIF1
DSC2
SPATC1L
CCDC91
CCNL1
KLF3
NDC80
METTL4
THAP9
SEC31A
TMX1
NPHP1
ATP5MG
MAPK1IP1L
ADCK5
BRD3OS
WFIKKN1
SSBP2
ZHX3
ZBTB37
GLIPR1L2
BAIAP2L1
OSGIN1
HEXIM1
GFI1B
GCNT3
CXXC5
BSPH1
BTBD2
ANO7
STXBP1
SBNO1
CUL3
FBRS
PBX2
ULK1
HDDC2
SPOP
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
UBE2L5
CIB3
USF3
CAPN12
ATXN2L
SCYL3
IQUB
PRELP
KASH5
JRK
ESRP1
COTL1
SMARCD3
CCDC7
KCTD9
CDCA2
SETDB1
SLC29A4
SPRING1
RNFT2
CDK18
LARP1
MRC2
SMG7
CACNG6
SYNGAP1
VLDLR
MSRB2
ATXN7
TRIB1
SUZ12
ZNF512B
ARF3
C10orf67
APOBR
PI16
NPRL3
LRRN3
MTMR4
PRR12
MTRNR2L10
USP34
TLCD1
BIRC7
PPP1R21
C17orf58
SPIRE2
MTRF1
DSTN
BFSP1
SIGIRR
USP38
SLC8A2
PHF21A
RASSF2
ZNF524
FIZ1
CBLC
RNF43
SP3
KCTD13
TMEM65
JPH4
C17orf64
RSF1
AAMDC
TUBA1C
MECOM
LARGE1
ALKAL2
TLK1
ARFGEF2
BCAS3
CATSPERG
CMBL
CAP2
TFEB
POLK
CERT1
USP32
IGLON5
CREM
C16orf72
ACTR3
MEAK7
NIM1K
NAV1
APPBP2
FOXJ2
SP2
CDC42EP5
EFCAB2
MSI2
CLTC
LHFPL2
CACNA1S
POU2F1
GREB1
SMURF1
ITPR1
FOXA2
SP1
DDI2
INTS9
HMBOX1
NAP1L5
CST3
RCAN3
CTCFL
NKX2-1
CPLX2
MYADM
SATB2
ZNF148
KCNQ2
CHRNA4
PCBP2
PHF23
VNN2
KLK7
RPH3A
PRDM11
OCLN
NPEPPS
DHX34
OR10H5
TSHZ3
FBXL19
PI4KB
MED6
LHX6
RASSF5
MDM4
TXNIP
PLCXD1
DYNLL2
PLXDC2
AHCYL2
SERPINA3
ZNF205
MLLT10
IL26
PLCB1
TAF6L
HERC4
CREBRF
FOXK1
CNPY1
LMNB1
ARID2
BRD2
BBX
GTF2H4
FBXO11
SMG1
SIGLEC15
ADAMTS9
VILL
ZFR
PPM1D
TSC22D1
SKA2
PRR11
CA11
BRIP1
BCL2L2-PABPN1
BCL2L2
LAMC1
RNF19A
HMGB4
MRGPRE
ERICH6
ARC
BCAP31
ABCD1
ZNF131
SBK2
ATXN1
RALY
KCNK15
CROCC
PTPRH
LMBRD1
KMT2E
WBP1L
TMEM170A
LRATD2
KCNN4
TMCO3
PRPF40B
DCUN1D2
TRA2A
PABPC1
MSRB3
HSD17B14
HMGN1
RARG
PHF2
AAAS
HOXC11
AMZ2
RNF139
GNG8
PPP2R5C
GZMM
GNAS
MEF2C
STAT6
MADD
ATXN7L1
SCYL2
DEPDC4
BMI1
KCNIP2
GRP
RNASEH2C
MRPL38
TLCD3B
CALHM2
TAF7L
TMEM271
CDKN3
TMEM126A
TCL1B
WDR26
TMEM30A
SOCS2
NCOA3
GTF2IRD1
CCDC59
SLC25A19
RIMS2
KLHDC10
KCNB1
CCK
UNC80
S100A16
PTGIS
PPP1R16A
KIF6
ATP4A
SPRY3
SHOX2
SEC13
ID2
HSPA1L
HSPA1A
APCDD1
GDF6
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
GABBR1
UBTD2
RIPOR3
NFAM1
MTOR
GJA1
TASP1
IRX6
FKBP1A
EFS
E2F3
SEZ6L2
RBM27
ASPHD1
DDX59
CAMK2D
AJM1
ZEB1
PHF7
BAP1
PRAC2
PRAC1
KSR2
GATAD2B
ORC4
NPC2
MBD5
ISCA2
DPEP1
ING3
GSC
TRAPPC2L
GALNS
DGKH
TM4SF1
CPNE6
NTNG1
KLK6
DNAJC27
ZNF384
TFAP2A
DOK5
STX16
COL20A1
PDE1B
SERPINI1
ROCK2
PDCD10
KRT8
WNK1
RAB6A
IREB2
DCAF5
MARCHF6
RUNX1T1
ARRDC4
SDC2
FAM214A
TNPO3
SYNCRIP
ANP32B
GET4
PAN3
NUCKS1
MYOZ3
GABPB2
TECPR1
LHX4
LIN7A
BCL9
RGS9
CTDSP1
AURKC
CXXC4
COLEC11
RNF41
IKZF2
SIPA1L1
PRSS22
LRRC4B
ITPRID2
FIGNL2
THRAP3
SRSF9
PRRC2B
NUDT16L1
DYNLL1
PPFIBP1
BPTF
PRAME
LDB2
DRAP1
C11orf68
ZNF462
RAP2C
DUSP4
CFAP410
C1orf21
FAM117A
CDC25B
POLR2H
FADS2
FADS1
CLCN2
RIN2
JDP2
DICER1
SH3KBP1
IQCE
EBNA1BP2
CSNK1D
CFAP57
TRIM56
CIART
ALMS1
PTPN4
INPP5F
PTGIR
RC3H2
BACE2
R3HDM2
CREBBP
STRN3
AP4S1
SV2C
SLC39A7
RXRB
ARHGAP22
TSC22D4
ADRM1
OMA1
DAB1
ATXN7L3
RSPH6A
KCNK3
CDV3
TNS1
NRL
HIF1A
DCAF11
PODNL1
DCAF15
AMHR2
PCF11
DCDC2C
CACNB4
TPTE
SCN1A
MED25
STMN3
FEZF1
UBE2Z
TOP3A
SMCR8
MAD1L1
TPT1
CTBP2
SEMA3F
ADGRG1
ZNF768
HES3
TMEM119
SBK3
SNRNP200
RICTOR
NRCAM
UBR3
PRR5L
NEDD4
ALPK1
PGAM1
SKAP2
NR6A1
SOCS5
SKIL
NEU4
ACAP2
YWHAB
SYTL2
NKX3-1
CPLX1
SPOPL
SH3PXD2B
EIF4B
TTC6
RORC
FOXA1
ZMYM2
TRIM9
DLX1
ABI1
DUSP16
FAM168A
ZFHX3
RAB11FIP2
CD63
KLF4
FBLIM1
TRIM46
TMEM94
HNRNPF
BCAS1
UBR5
SCLY
NEGR1
ELF2
ASPHD2
TMEM245
RIF1
TSC1
SH2D3C
TEDC1
CRHR1
BNIPL
ARHGEF5
MFN1
SEPTIN2
PGR
HDLBP
ZNF71
B3GALNT2
ZNF628
SELENBP1
AADACL4
UBE2D3
SCAF8
DNAH2
RABEP1
RAB5B
DEFB4A
ARID4A
UBE2R2
ASTN1
KCNJ15
GJA5
ARHGEF35
PTPRCAP
CST4
AMPH
NOVA1
TMC4
GAB1
RABGAP1L
COBL
RASGRF1
NUP155
HOXA4
BASP1
CDC42
ACOXL
ZFHX2
NDRG2
ARHGEF40