ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741420 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◣ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L8
GTF2H4
PTPRF
CCDC107
PSMB6
VPS37D
MRPL45
MTRNR2L2
ZNF335
PIH1D1
ALDH16A1
TOMM7
RGPD2
RGPD1
NUDT9
TBC1D4
SMU1
WDR74
ZMAT2
RNF24
UBE2V2
MRFAP1L1
CYRIB
NLRX1
HLA-E
ADRM1
CDK12
UBE2L3
CTNNBL1
RNF216
HEATR3
XKR8
AHCY
UBFD1
EARS2
TESK1
MELK
TOR1A
NR6A1
CLTA
OSCAR
NDUFA3
C19orf25
KXD1
NEURL4
WDR43
MED23
NCOA5
PHKB
ITFG1
MRFAP1
PREB
MCC
ZDHHC24
ACTN3
CFDP1
PIGO
ZDHHC12
DLAT
UBOX5
FASTKD5
STOML2
SPAG8
DPH5
OSGIN1
EPRS1
RAC1
HAX1
RIN2
ZNHIT6
TERF2
AP2A2
CRLS1
SOGA1
PAXX
RPL6
CWF19L2
ARNT
ARHGEF1
SMARCD2
HRCT1
GPCPD1
DAGLB
RUSC2
TIA1
ENGASE
ARHGEF39
UTP25
AARS2
ICMT
FKTN
KDM3B
EPS15
EIF3C
EIF3CL
PRMT1
PAXBP1
ZCCHC4
ZNF131
TKT
GTF2H5
KTN1
CLK3
GRSF1
FXN
MLLT1
VCP
FOXK2
SCML1
SLC29A3
ZNF184
MAPK14
LAPTM5
LDLRAP1
TLN1
CREB3
LEO1
ATG4C
LPAR2
TRMT1
LSM14B
SPHK2
RPL18
MATR3
CCNC
GABARAPL1
UNC93B1
DMAP1
CDC25B
CNOT11
MVB12A
DRG2
PDSS2
ZNF638
TIMM23
TAF1C
DYM
SLC35A4
APBB3
FAM8A1
PAK4
SRXN1
FBXW5
C8G
AKIRIN2
HPS6
PDCL3
EIF3D
CLPB
EED
LARP1
TGDS
LOC730098
CDK8
DNAJC19
MRPL58
RPS14
NDUFS7
NACC1
SPOCD1
SP2
PPP1R13L
POLG2
RPL37
MRPL54
APBA3
H4C6
SMCO4
FANCG
NUF2
STX16
NPR2
SCAMP4
ADAT3
RPP25L
RPL36
FKBPL
ADPRHL1
C17orf64
PDCL
SLC38A10
TPK1
TRIP4
RBM4B
GRPEL2
SLC25A20
HIPK3
MEGF8
ZZEF1
CYB5D2
KDSR
C4orf48
SH2B1
ZBTB43
HEXB
C16orf70
TUFM
PCCB
LUC7L2
FMC1-LUC7L2
SYT11
GON4L
NMRK1
TPM2
PTPN1
ADNP
CBX4
PDE4A
SLC44A1
MRPL35
RPL10A
SMARCC2
NUP85
KANSL3
DOT1L
SBDS
KLF5
CEP164
UIMC1
SLC25A25
NAIF1
STXBP4
COX11
ATR
TRAPPC3
FPR1
ZBTB3
INTS5
PDLIM7
TIMM10
GADD45GIP1
EFR3A
TFB1M
PANK3
DENR
RBM12
CPNE1
SETD1A
GHITM
SORBS1
HMGN4
RAB2A
SGSM1
IL11RA
RIOX1
SRRD
HPS4
TCF3
MTMR14
SIRT5
ZCCHC14
KDM1A
DHX15
PTPN4
TMPRSS9
MRPL44
ELOVL6
DNM2
GLIPR1L2
SSBP2
CASP4
TENT2
TJP3
KCTD2
ATP5PD
MRPL38
DDX18
DHRS3
HPS1
CHST15
UROS
BCCIP
MEX3C
PTK2B
ZNF555
RBM45
GABPB2
MAP2K6
CSRNP1
NFE2L2
CIC
PORCN
MEGF9
BRAT1
SMG8
CCNT1
PKD2L2
NELFCD
BMS1
NUMA1
LRTOMT
DPF2
PRPSAP1
PITPNA
SMG5
SREBF2
GNE
ASXL1
XPO5
POLH
SPATA2
DCT
KRBA2
SPAG4
EBAG9
SNU13
TMEM242
SARS2
MRPS12
TDP2
ACOT13
CAMK2G
VKORC1
ISOC2
AARSD1
CCDC22
LRRC37A3
ZC3H15
TANK
RABGGTA
PLEKHG2
GSTA4
SSBP1
HUS1
SNRPC
RBM12B
TAF5
UBE4A
ZFAND1
PKD1L2
CIAO3
PRDX1
TM2D1
EMC8
COX4I1
BEGAIN
ICAM1
PSMD5
TMEM68
TGS1
YTHDF2
ALG10B
FAM168B
MARCHF7
RAB11B
OPA3
SDAD1
CARD14
ARFGEF2
CCDC117
PCID2
CUL4A
ATG16L1
BIRC3
KIF16B
ELAVL1
MGAT1
RGP1
GBA2
TCP11L1
EMC4
FLOT1
POLR3E
TRIM32
ASTN2
GSDMD
SLC45A4
RBBP5
RNF114
COMMD2
DYNLRB1
ZSCAN30
HINT2
SCFD1
MRPL12
EIF3E
TMEM214
SEC14L1
TRAM1
MRPL39
TOR1B
CUL7
FBXO46
SH3BP4
TBPL1
EVI5L
FAM220A
ZNF343
SLC26A11
SGSH
SLC27A4
TSEN54
CASKIN2
PPAN-P2RY11
PPAN
GGCX
MTOR
ZNF606
CDA
ATP5MC1
ANGEL2
PSMB2
ROBO4
COASY
LZTS3
RAB5C
ZNF839
C9orf131
RIF1
ASMTL
ARSD
VPS13B
CYREN
CCDC43
TBX6
ESCO1
RPL38
MFAP2
RBMS3
CIZ1
HIBADH
USP42
LAMTOR5
RPS12
TMEM267
MAP4K1
EIF3K
STRADA
GORASP2
HIBCH
GBA
NUCKS1
RFX1
NPAS4
CACTIN
CLPP
METTL14
SLC25A16
SPATC1L
MTRNR2L9
PEX3
ADAT2
RPL27
LTO1
CABLES2
GADD45B
CHST12
PPP5D1
CALM3
UBE2F
SLC30A6
ZNF77
TCTN3
CLUAP1
WDR59
SLC35B1
RPS7
GTF3C3
ZBTB40
TACO1
NAE1
LGR6
MKNK2
PSMD4
RAB14
GSN
DYNC2I1
ELP3
TDRD7
RMND1
ARMT1
CDK5RAP1
SLC31A1
FKBP15
MTF2
PPP6C
DPY19L4
SRPK1
STAT3
ILF2
SPC24
SWSAP1
WASF2
ZSCAN25
RAB4B
RNF213
INTS12
GSTCD
MTBP
MRPL13
GRK1
COPS4
UBXN4
TGFB1I1
COMMD6
AP2S1
SYMPK
FOXA3
DCAF7
RAD52
ZNF234
RAB5B
SF3A3
PGK1
TIGD1
EIF4E2
COX7A2
TRIM26
USP35
KCTD21
TIMM9
KIAA0586
ZSCAN9
RNF187
MRI1
VPS37C
DPP3
ATF6
WDR70
SNX16
C8orf37
DMAC2
ERCC6L2
DOLPP1
AP3B1
TMEM41A
MTRNR2L10
ATP5MC3
POLR1H
PCBD2
NICN1
UTP3
NOL11
BRAP
ACAD10
RCC1
PSMD9
HPD
FAF1
PAFAH2
ANXA2
SHFL
AURKAIP1
ZBTB45
SEMA4B
PPP6R1
REXO4
ZDHHC5
MRPS14
LMO7
SEC13
RCN1
ADAM19
LSM5
NDUFS5
UCHL3
SYT7
ST6GALNAC4
MANBAL
RPS6
PPIL3
NIF3L1
TBC1D19
MAD1L1
UBE2Q1
RPL37A
DSTYK
SIRT4
AMZ2
COX16
SLC35E2B
RABGEF1
ABRAXAS2
GALNT10
PLEKHM3
TFPT
PRPF31
INO80C
MDGA1
S1PR4
NIPA2
KIF2C
PPEF1
COX5A
CHMP6
ENSA
CYB5R4
ASF1B
NCBP3
TTC38
GPSM2
AKT2
EIF2D
AP3S2
MTERF1
GTF2H2
IL1RAP
FBXL19
H6PD
FAM200B
TMEM161A
PRRG2
NOSIP
MFSD4B
EIF4A2
NCOA7
SYNGR2
STXBP3
PNPLA6
ST6GALNAC6
TSC1
GFI1B
NEMF
LAMP3
ZNF687
INKA2
DDX20
PRELID2
TSACC
CCT3
ZER1
TMEM51
PMM1
DPY19L1
CYLD
ARL14EP
NME1-NME2
NME1
LPP
WIPI2
GAMT
OMA1
DAB1
GEMIN6
PRRT3
GALT
RECK
NDUFAB1
SLC25A44
MRPL3
TIMM22
YEATS2
MTR
UQCR11
GTF2H2C
DEF8
ZNF572
TTC21B
PTPRA
RFX7
RPS29
XKR7
BRIX1
DRAM2
CEPT1
KLHL20
CERCAM
TMEM18
ERCC1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRUNE1
MINDY1
SP1
MRPS15
AGBL3
OPA1
TCIRG1
NEDD1
VTA1
POU2F2
NMBR
BNIP1
NKIRAS2
NEK6
DNAJC7
GPR160
CLCF1
PARG
NLRP1
ZSWIM3
ACOT8
TRMT2A
RANBP1
TSSC4
RPL24
USP45
RBIS
MARS1
LRRC59
ARHGAP9
TRIM45
EIF5A
EEF1AKMT1
WDR7
CDC5L
ZMPSTE24
ARHGAP24
ZFP36L1
ANKRD46
OSBP
EHD2
CTR9
COL6A1
ZNF554
SYNJ2
RRP15
ADA
GTF2IRD2B
TBRG4
CDYL
SH2D5
GTF2H2C_2
NDUFC2-KCTD14
NDUFC2
LMTK3
MTIF2
PGBD2
ALKBH3
ACOT9
TOM1L2
MITD1
DRC3
ASB6
ZNF408
NOTCH2NLC
MED18
EIF1AD
CDK9
BANF1
ARHGAP1
NUTM1
NOP10
MAP3K10
ATAD2
RPN1
ROBO3
GNG7
NBN
DNAJC25-GNG10
DNAJC25
ZFAND4
MTHFSD
HM13
KCTD18
C6orf226
MOSPD3
IFT46
CTPS1
ECSIT
E2F6
CASC3
SNRPE
TFAM
IFTAP
SNUPN
MDFIC
GALNT11
INTS2
H4C3
SMIM8
CDK11A
AMOTL1
VAT1
IQSEC3
PRCD
KDM4B
ATXN7L2
ZCCHC3
PGS1
DST
BEND6
BANP
STX18
MRPS33
ANKRD13C
RPS20
MRPL48
RBL1
KCTD3
FUT10
GRK6
FLVCR1
COL18A1
POLG
PLEKHG4
PARP2
EIF3F
CDK11B
SH3GLB2
GTF3C5
SLC12A9
EPHB4
COQ3
STARD3NL
TPP2
TBL3
RPAP1
EPOP
ADAR
SEC62
NIPA1
LSG1
ABCB8
ZNF443
TADA1
SLC66A3
SUGCT
MPLKIP
FRA10AC1
FAM133B
SAAL1
MAD2L1BP
HEATR1
UBE3B
TCERG1
FAAP20
TRIB1
MAPK1IP1L
MAP11
KIF3B
SELENOH
MYO1C
PYCR1
EIF5A2
RIPOR3
ZNF609
SPAG16
SNRPB
MBD4
IFT122
PRKAB2
CHD1L
PSMF1
HTR5A
DHX16
KDELR2
WDR36
NOTCH2
ZNF582
POLI
MELTF
MRPS10
UPP1
TMEM222
RARS1
LITAF
VPS35L
TTC14
POLR2J
ETFDH
DECR1
C4orf46
KDM3A
DCP1A
ATF2
UQCC1
MMS22L
ZC3H6
CCDC42
NES
KCNIP3
RIN1
INTS9
HMBOX1
RPL13
CELSR3
RNFT1
POFUT1
PLAGL2
NSUN4
DIPK1B
SCAND1
RGL2
PRKAR1B
PIP5KL1
AP1G1
POLR1F
HSPA6
FUCA2
FAIM
ARHGEF16
SNAP47
JMJD4
TIMM17A
RCAN1
MUC1
FAM98B
C20orf27
PIGBOS1
PIGB
MRPS17
POLR2J3
COPS7A
C8orf76
ITFG2
GNA13
FCHO1
COQ7
TMEM170A
HERC5
TBL1X
PPP6R3
MTFR1
PPP4R3B
CGGBP1
C3orf38
FBXW9
DTD1
ALG10
ZNF764
VARS1
PKN3
DDX1
KIAA0895
ANLN
TRIM59
RBM28
FAM135A
ABT1
PTK6
EFHD1
IPO13
BCAR3
B4GAT1
DUS1L
ARPC3
SNX8
SDHAF3
CPPED1
CCDC59
ZNF165
PIH1D2
NKAPD1
BCAS3
LY96
FAM156B
FAM156A
TIPARP
NDUFAF4
KLHL32
ARL4A
TRABD
SERPINB6
HIF1AN
GALK1
MCM7
AP4M1
ZNF577
NDUFS3
KBTBD4
CDK20
ZNF655
KLHL12
CCZ1B
TUBGCP3
CHCHD2
TRAF6
SNRPB2
RAG1
PRDM8
SEPTIN7
DNMT1
CIPC
CORO1C
HNRNPD
ZRANB2
ZNF713
DAB2
CYP51A1
ZDHHC6
VTI1A
UNC13B
PRKCA
SIGMAR1
CRTC1
ZNF391
ZNF181
TNPO3
THEM4
SNRPD3
PSMD14
GUCD1
FGFRL1
UBE2S
NMNAT1
LZIC
CDC42
RGPD8
RGPD6
RGPD5
PGM1
MRPL21
IGHMBP2